prot_H-paniculata_contig1996.5097.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1996.5097.1
Unique Nameprot_H-paniculata_contig1996.5097.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length101
Homology
[Close]
BLAST of mRNA_H-paniculata_contig1996.5097.1 vs. uniprot
Match: D7FIC2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIC2_ECTSI)

HSP 1 Score: 79.3 bits (194), Expect = 4.670e-16
Identity = 41/76 (53.95%), Postives = 54/76 (71.05%), Query Frame = 0 
Query:   25 GKARRAPKVQDVPRSDNFRLVVLDEEXXXXXXXXAGNKSHAAEKARNFLRERVQAQKRISHGLLKARQRLGPSPHF 100
            G+ +   K  D  RSDNFRLVVLDE+          +K+HAAE A+NFLR+R+ ++KR+SH L KAR+RLGPSP+F
Sbjct:  142 GRRKARAKAGDASRSDNFRLVVLDEDDGGVDADDE-SKAHAAESAKNFLRDRMGSRKRVSHSLFKARKRLGPSPNF 216
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1996.5097.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FIC2_ECTSI4.670e-1653.95Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1996contigH-paniculata_contig1996:1749..3071 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1996.5097.1mRNA_H-paniculata_contig1996.5097.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1996 1265..3892 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1996.5097.1 ID=prot_H-paniculata_contig1996.5097.1|Name=mRNA_H-paniculata_contig1996.5097.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=101bp
MEAERRELQGANEVAQAEAALKVAGKARRAPKVQDVPRSDNFRLVVLDEE
ENGGGSGGAGNKSHAAEKARNFLRERVQAQKRISHGLLKARQRLGPSPHF
*
back to top