mRNA_H-paniculata_contig1995.5094.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig1995.5094.1
Unique NamemRNA_H-paniculata_contig1995.5094.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig1995.5094.1 vs. uniprot
Match: D7FZG6_ECTSI (Acetyl-CoA carboxylase, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZG6_ECTSI)

HSP 1 Score: 866 bits (2238), Expect = 2.610e-306
Identity = 442/539 (82.00%), Postives = 479/539 (88.87%), Query Frame = 1
Query:    1 MENMTPAKVAELAKIIQAKKDADTGKTTDGEPINVIHVALMKSPEKMKEDDTDSSGVNEIISKVESVLHENDAVLQSAGVRMVSVLFRSQGARQPRYLSFRECMDYKEDPVRRDMRPSFPYIFELGRLAVNYNLERLPTVGRNSQIYLGVERGSALKRSTPQTLFLRAISHRQETYTMEGANQALLMAMDELERAMLDTRVNPACSTRIFLHMMPELTAVPKQVVAEWKTVMDTLISRHATRLLKLRVDEIEVKARIATGEHGEREITPLRLMASSMSGQWLRMDGFEEYPDPITGVTKQWCKLTGGEADGEGMCMLNPYPASNSVQLRRAAARRIGTTYAPDFLGLMEVALIGMWSEFLADLKDAAGASGTPPMTSMPSPLFESDELVLQADGSLAKQFRMVGTNKVGMLAWHVVMRTPEYPGGRELVIIANDVTFQSGSFGVREDDFFKAASEYARKLGVPRIYISSNSGARIGLVEELKPKFKVAWNDDSNPAQGFKYLYLSPEDYGALEEGTVNTREVVVDGEKRYELTDIIGQV 1617
            M ++T  KVAELAKIIQ  KDADTGK TDGE +NV+HVALMKSPE M  ++     V ++I++ E+V   N A L++AGVRMVS+LF++ GARQPRYLSFRECMDYKEDPVRRDMRPSFPYIFELGRL VNY LERLPTVGRNSQIYLGVERG ALKR+TPQTLFLRAISHR ETYTMEGANQALLMAMDELERAMLD+RVNPACS+RIFLHMMPEL AVP  VVAEWK VMDT+ISRHATRLLKLRVDEIEVKARI+  E   + ITP+RLMASSMSGQWLR+DGF+EYPDPITGVTKQWC LT     G  +CMLNPYPASNSVQ+RRAAARRIGTTYAPDFLGLMEV LIGMWSEFL++LKDAAGASGTP  TSMP  LFESDELVLQ+DG+L KQFR+VGTNKVGMLAWHV+MRTPEYP GRE+VIIANDVTFQSGSFGV EDDFF AASEYARKLG+PRIYISSNSGARIGLVEELKPKFKVAWND+SNPAQGFKYLYL+ EDY ALEEGTVN REVV  GEKRY LTDIIGQV
Sbjct:    1 MASLTDEKVAELAKIIQDVKDADTGKGTDGEAVNVLHVALMKSPESMAHEE---GAVADVIAQCEAVFQRNQAALKNAGVRMVSLLFQTDGARQPRYLSFRECMDYKEDPVRRDMRPSFPYIFELGRLDVNYKLERLPTVGRNSQIYLGVERGGALKRATPQTLFLRAISHRPETYTMEGANQALLMAMDELERAMLDSRVNPACSSRIFLHMMPELNAVPGDVVAEWKNVMDTMISRHATRLLKLRVDEIEVKARISPDESSGK-ITPVRLMASSMSGQWLRVDGFQEYPDPITGVTKQWCSLT----QGGDICMLNPYPASNSVQIRRAAARRIGTTYAPDFLGLMEVGLIGMWSEFLSELKDAAGASGTPAYTSMPGQLFESDELVLQSDGTLQKQFRVVGTNKVGMLAWHVMMRTPEYPEGREIVIIANDVTFQSGSFGVAEDDFFLAASEYARKLGLPRIYISSNSGARIGLVEELKPKFKVAWNDESNPAQGFKYLYLNAEDYEALEEGTVNAREVVEGGEKRYALTDIIGQV 531          
BLAST of mRNA_H-paniculata_contig1995.5094.1 vs. uniprot
Match: A0A6H5L0S0_9PHAE (Acetyl-CoA carboxylase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0S0_9PHAE)

HSP 1 Score: 860 bits (2223), Expect = 2.480e-291
Identity = 441/540 (81.67%), Postives = 478/540 (88.52%), Query Frame = 1
Query:    1 MENMTPAKVAELAKIIQAKKDADTGKTTDGEPINVIHVALMKSPEKMKEDDTDSSGVNEIISKVESVLHENDAVLQSAGVRMVSVLFRSQGARQPRYLSFRECMDYKEDPVRRDMRPSFPYIFELGRLAVNYNLERLPTVGRNSQIYLGVERGSALKRSTPQTLFLRAISHRQETYTMEGANQALLMAMDELERAMLDTRVNPACSTRIFLHMMPELTAVPKQVVAEWKTVMDTLISRHATRLLKLRVDEIEVKARIAT-GEHGEREITPLRLMASSMSGQWLRMDGFEEYPDPITGVTKQWCKLTGGEADGEGMCMLNPYPASNSVQLRRAAARRIGTTYAPDFLGLMEVALIGMWSEFLADLKDAAGASGTPPMTSMPSPLFESDELVLQADGSLAKQFRMVGTNKVGMLAWHVVMRTPEYPGGRELVIIANDVTFQSGSFGVREDDFFKAASEYARKLGVPRIYISSNSGARIGLVEELKPKFKVAWNDDSNPAQGFKYLYLSPEDYGALEEGTVNTREVVVDGEKRYELTDIIGQV 1617
            M ++T  KVAEL KIIQ  KDADTGK TDGE +NV+HVALMKSPE M  ++     V ++I++ E+V   N A L++AGVRMVS+LF++ GARQPRYLSFRECMDYKEDPVRRDMRPSFPYIFELGRL VNY LERLPTVGRNSQIYLGVERG ALKR+TPQTLFLRAISHR ETYTMEGANQALLMAMDELERAMLD+RVNPACS+RIFLHMMPEL AVP  VVAEWK VMDT+ISRHATRLLKLRVDEIEVKARI+  G  G+  ITP+RLMASSMSGQWLR+DGF+EYPDPITGVTKQWC LT     G  +CMLNPYPASNSVQ+RRAAARRIGTTYAPDFLGLMEV LIGMWSEFL++LKDAAGASGTP  TSMP  LFESDELVLQ+DG+L KQFR+VGTNKVGMLAWHV+MRTPEYP GRE+VIIANDVTFQSGSFGV EDDFF AASEYARKLG+PRIYISSNSGARIGLVEELKPKFKVAWND+SNPAQGFKYLYLS EDY ALEEGTV  +EVV  GEKRY LTDIIGQV
Sbjct: 1054 MASLTSEKVAELTKIIQDVKDADTGKGTDGEAVNVLHVALMKSPESMAHEE---GAVADVIAQCEAVFQRNQAALKNAGVRMVSLLFQTDGARQPRYLSFRECMDYKEDPVRRDMRPSFPYIFELGRLDVNYKLERLPTVGRNSQIYLGVERGGALKRATPQTLFLRAISHRPETYTMEGANQALLMAMDELERAMLDSRVNPACSSRIFLHMMPELNAVPSDVVAEWKNVMDTMISRHATRLLKLRVDEIEVKARISPDGSSGK--ITPVRLMASSMSGQWLRVDGFQEYPDPITGVTKQWCSLT----QGGDICMLNPYPASNSVQIRRAAARRIGTTYAPDFLGLMEVGLIGMWSEFLSELKDAAGASGTPAFTSMPGQLFESDELVLQSDGTLQKQFRVVGTNKVGMLAWHVMMRTPEYPEGREIVIIANDVTFQSGSFGVAEDDFFLAASEYARKLGLPRIYISSNSGARIGLVEELKPKFKVAWNDESNPAQGFKYLYLSAEDYEALEEGTVIAQEVVEGGEKRYALTDIIGQV 1584          
BLAST of mRNA_H-paniculata_contig1995.5094.1 vs. uniprot
Match: A0A836CCC4_9STRA (Acetyl-CoA carboxylase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCC4_9STRA)

HSP 1 Score: 647 bits (1668), Expect = 2.290e-210
Identity = 338/534 (63.30%), Postives = 413/534 (77.34%), Query Frame = 1
Query:   25 VAELAKIIQAKKDADTGKTTDGEPINVIHVALMKSPEKMKEDDTDSSGVNEIISKVESVLHENDAVLQSAGVRMVSVLFRSQGARQPRYLSFRECMDYKEDPVRRDMRPSFPYIFELGRLAVNYNLERLPTVGRNSQIYLGVERGSALKRST---PQTLFLRAISHRQETYTMEGANQALLMAMDELERAMLDTRVNPACSTRIFLHMMPELTAVPKQVVAEWKTVMDTLISRHATRLLKLRVDEIEVKARIATGEHGEREITPLRLMASSMSGQWLRMDGFEEYPDPITGVTKQWCKLTGGEADGEGMCMLNPYPASNSVQLRRAAARRIGTTYAPDFLGLMEVALIGMWSEFLADLKDAAGASGTPPMTSMPSPLFESDELVLQADGSLAKQFRMVGTNKVGMLAWHVVMRTPEYPGGRELVIIANDVTFQSGSFGVREDDFFKAASEYARKLGVPRIYISSNSGARIGLVEELKPKFKVAWNDDSNPAQGFKYLYLSPEDYGALEEGTVNTREVVVDGEKRYELTDIIGQV 1617
            + EL K+ Q       G+   GEP+NV+H A ++S +   E       + +++++ E++L  N   L+S GVR VS LFR Q  RQPRYLSFREC  + +DP+RRDMRPSFPYIFEL RL+VNY+LERL TVGRNSQIYLGVER + + +     PQTLFLRAIS+RQETY+ EGAN+ALLMA+DELERAMLD RV+P  S+R+FLHMMP+L     +VV  W+ +MD LISRHATRLLKLRVDEIEVK RI  GE    E+ P+RLMASSMSG+WLR DGF EYPDP+TGVTKQ+C LT    D   +C+L+PYP SN VQ++RAAARRIG+TYA DFLGL+EV+LIG+W +FL +LK ++ A   P +T MP+ +F+S ELV++ DG L K+FR+VGTNKVGMLAWH  MRTPEYP GRE+VIIANDVTFQSGSFGV ED+FF+ ASEYAR  G+PR+YISSNSGARIGLV++LKPKFK+AWND+++P  GFKYLYLS  DY AL EGTVN  +V   GE R+ L DIIGQV
Sbjct: 1020 IGELKKLTQ-------GQAEYGEPLNVLHAAFLQSADVSPELVAQREAMRKLVAQSEAMLKANLNGLRSGGVRGVSFLFR-QSPRQPRYLSFRECSGFVDDPLRRDMRPSFPYIFELERLSVNYDLERLATVGRNSQIYLGVERDAKVGKKPKVKPQTLFLRAISYRQETYSPEGANKALLMALDELERAMLDPRVSPTASSRVFLHMMPDLKMETGEVVTNWRAIMDQLISRHATRLLKLRVDEIEVKIRITEGE----EVKPIRLMASSMSGEWLRTDGFLEYPDPVTGVTKQFCSLT----DANSVCLLSPYPTSNMVQIKRAAARRIGSTYAYDFLGLIEVSLIGIWEQFLNELKLSSKA---PVLTKMPANIFDSAELVMK-DGKLTKEFRIVGTNKVGMLAWHTTMRTPEYPAGREVVIIANDVTFQSGSFGVEEDEFFRQASEYARTRGLPRVYISSNSGARIGLVDDLKPKFKIAWNDENSPGLGFKYLYLSDTDYKALAEGTVNAEKVEHMGETRWALKDIIGQV 1533          
BLAST of mRNA_H-paniculata_contig1995.5094.1 vs. uniprot
Match: A0A0B4L7Y6_9STRA (Acetyl-CoA carboxylase n=1 Tax=Nannochloropsis oculata TaxID=43925 RepID=A0A0B4L7Y6_9STRA)

HSP 1 Score: 554 bits (1428), Expect = 1.760e-175
Identity = 292/530 (55.09%), Postives = 380/530 (71.70%), Query Frame = 1
Query:   40 KIIQAKKDADTGKTTDGEPINVIHVALMKSPEKMKEDDTDSSGVNEIISKVESVLHENDAVLQSAGVRMVSVLFRSQGARQPRYLSFRECMDYKEDPVRRDMRPSFPYIFELGRLAVNYNLERLPTVGRNSQIYLGVER---GSALKRSTPQTLFLRAISHRQETYTMEGANQALLMAMDELERAMLDTRVNPACSTRIFLHMMPELTAVPKQVVAEWKTVMDTLISRHATRLLKLRVDEIEVKARIATGEHGEREITPLRLMASSMSGQWLRMDGFEEYPDPITGVTKQWCKLTGGEADGEGMCMLNPYPASNSVQLRRAAARRIGTTYAPDFLGLMEVALIGMWSEFLADLKDAAGASGTPPMTSMPSPLFESDELVLQADGSLAKQFRMVGTNKVGMLAWHVVMRTPEYPGGRELVIIANDVTFQSGSFGVREDDFFKAASEYARKLGVPRIYISSNSGARIGLVEELKPKFKVAWNDDSNPAQGFKYLYLSPEDYGALEEGTVNTREVVVD-GEKRYELTDIIGQV 1617
            K  +  K A  G+    +P NV HVA+ + PE  +          E+I+ +E +L EN  +L    VRMV+VLF  QGA+ PRY +F    D+KEDP+RRDMRP+FP + EL RLA NY L+RLP++GRN+Q+YLG ER   G+  +    Q LF+R ISH ++T T  GA + LLMAMDEL+ A+LD RV  + S+R+FL+++  + + PK +  EW  +MD L++++ATRLLKL VDEIE+K R+A G      ITP+RLMASSM+G++LR D F EYPDP+TG+TKQ+C +T  +     +C+LNPYPASNS+Q RRA+ARRIG+TYA DFLG+MEV+LI  W + L +L     +        MP  LF++DELVL+ DG L    R+VG N VGM+AWH  M+TPEYP GRELVIIANDVTFQSGSFGV+EDDFF+AASEYAR  G+PRIY+SSNSGARIGLV++LK KF++AWND +NP+ GFKYLYL+PE+Y  L+ GTVN   V+ + GEKR+ L DIIGQV
Sbjct: 1109 KFSKVLKTALAGQEAYSQPTNVFHVAVAQLPESQQP---------EVIANIEGILAENKDLLTECRVRMVNVLF-VQGAKNPRYFTFTAVKDFKEDPLRRDMRPTFPQLLELSRLAANYELQRLPSIGRNTQVYLGSERAPVGTKKRGPGNQVLFVRGISHSEQTQTPMGAERVLLMAMDELDYALLDERVGGSASSRLFLNLLVPIDSDPKTLAGEWSKIMDRLLAKYATRLLKLGVDEIEIKVRVAAGSGSA--ITPVRLMASSMTGEFLRTDAFLEYPDPVTGITKQFCSVTSEDQ----VCLLNPYPASNSIQTRRASARRIGSTYAYDFLGVMEVSLIQKWDKHLKELTSVYTSRVD---DKMPEQLFQADELVLE-DGVLKPTQRLVGLNDVGMVAWHATMKTPEYPEGRELVIIANDVTFQSGSFGVKEDDFFRAASEYARVRGLPRIYLSSNSGARIGLVDDLKGKFRIAWNDPANPSLGFKYLYLTPEEYEGLKPGTVNANLVLSEEGEKRWALQDIIGQV 1618          
BLAST of mRNA_H-paniculata_contig1995.5094.1 vs. uniprot
Match: I2CQP5_NANGC (Acetyl-CoA carboxylase n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CQP5_NANGC)

HSP 1 Score: 540 bits (1391), Expect = 3.000e-170
Identity = 286/529 (54.06%), Postives = 374/529 (70.70%), Query Frame = 1
Query:   40 KIIQAKKDADTGKTTDGEPINVIHVALMKSPEKMKEDDTDSSGVNEIISKVESVLHENDAVLQSAGVRMVSVLFRSQGARQPRYLSFRECMDYKEDPVRRDMRPSFPYIFELGRLAVNYNLERLPTVGRNSQIYLGVERGSA--LKRSTPQTLFLRAISHRQETYTMEGANQALLMAMDELERAMLDTRVNPACSTRIFLHMMPELTAVPKQVVAEWKTVMDTLISRHATRLLKLRVDEIEVKARIATGEHGEREITPLRLMASSMSGQWLRMDGFEEYPDPITGVTKQWCKLTGGEADGEGMCMLNPYPASNSVQLRRAAARRIGTTYAPDFLGLMEVALIGMWSEFLADLKDAAGASGTPPMTSMPSPLFESDELVLQADGSLAKQFRMVGTNKVGMLAWHVVMRTPEYPGGRELVIIANDVTFQSGSFGVREDDFFKAASEYARKLGVPRIYISSNSGARIGLVEELKPKFKVAWNDDSNPAQGFKYLYLSPEDYGALEEGTVNTREVVVD-GEKRYELTDIIGQV 1617
            K  +  K +  GK    EP NV HVA+ + PE         S   E+I+ +E++L E   +L    VRMV+VLF  +GA  PRY +F    ++KEDP+RRDMRP+FP + EL RLA NY L+RLP++GRN+Q+YLG ER +A   KR   Q LF+R ISH ++T T  GA + LLMAMDEL+ A+LD RV  + S+R+FL+++  +T  P+ +  EW  VMD L++++ATRLLKL VDEIE+K R+    +    ITP+RLMA+SM+G++LR D F EYPDP+ G+TKQ+C +T  +     +C+LNPYPASNS+Q RRA+ARRIG+TYA DFLG+MEV+LI  W + L +L     +        MP  LF + ELVL+ D  L    R+VG N +GM+AWH  M+TPEYP GRELVIIANDVTFQSGSFGV+ED+FF+AASEYAR  G+PRIY+SSNSGARIGLV++LK KF++AWND +NP+ GFKYLYL PE+Y AL+ GTVN   V  + GEKR+ L DI+GQV
Sbjct: 1113 KFSKVLKSSLGGKEVYSEPTNVFHVAVAQLPE---------SDQPEVIANIEAILAEKKELLTECQVRMVNVLF-VKGASNPRYYTFTAAENFKEDPLRRDMRPTFPQLLELSRLAANYELQRLPSIGRNTQVYLGTERAAAGVKKRGGSQVLFVRGISHSEQTQTPLGAERVLLMAMDELDYALLDPRVGGSASSRLFLNLLVPITTDPEALAGEWNQVMDRLLAKYATRLLKLGVDEIEIKVRVTADGN---TITPVRLMATSMTGEFLRTDAFLEYPDPVNGITKQFCSITREDQ----ICLLNPYPASNSIQTRRASARRIGSTYAYDFLGVMEVSLIQKWDKHLKELSSVYPSRVD---DKMPEQLFTAHELVLE-DDELQPTQRLVGLNDIGMIAWHATMKTPEYPEGRELVIIANDVTFQSGSFGVKEDEFFRAASEYARVRGLPRIYLSSNSGARIGLVDDLKGKFRIAWNDPANPSLGFKYLYLPPEEYEALKPGTVNANLVETEEGEKRWALQDIVGQV 1620          
BLAST of mRNA_H-paniculata_contig1995.5094.1 vs. uniprot
Match: A0A7S1HMI4_HEMAN (Acetyl-CoA carboxylase n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1HMI4_HEMAN)

HSP 1 Score: 513 bits (1321), Expect = 2.230e-160
Identity = 278/526 (52.85%), Postives = 362/526 (68.82%), Query Frame = 1
Query:   97 INVIHVALMKSPEKMKEDDTDSSGVNEIISKVESVLHENDAVLQSAGVRMVSVLFRSQGARQPRYLSFRECMDYKEDPVRRDMRPSFPYIFELGRLAVNYNLERLPTVGRNSQIYLGVERGS---ALKRSTPQTLFLRAISHRQETYTMEGANQALLMAMDELERAMLDTRVNPA-------------CSTRIFLHMMPELTAVPKQVVAEWKTVMDTLISRHATRLLKLRVDEIEVKARIATGEHGEREITPLRLMASSMSGQWLRMDGFEEYPDPITGVTKQWCKLTGGEADGEGMCMLNPYPASNSVQLRRAAARRIGTTYAPDFLGLMEVALIGMWSEFLADLKDAAGASGTPPMTSMP--SPLFESDELVLQADGSLAKQFRMVGTNKVGMLAWHVVMRTPEYPGGRELVIIANDVTFQSGSFGVREDDFFKAASEYARKLGVPRIYISSNSGARIGLVEELKPKFKVAWNDDSNPAQGFKYLYLSPEDYGALEEGTVN-TREVVVDGEKRYELTDIIGQV 1617
            +N  HVAL     +M    TD++ V   +S++ES L EN   L+  GVRMV+ L   Q  R PRY SF EC  Y E+P+RRDMRPSFPY+ EL RL++NY+L R+P +GRN+Q+++G E+     A+ R  PQT+FLRAISH  +T T  GA + LL AMDELERAML   V  A              S++IFLH++ E  A  + V+  +K++++ ++S+H+TRLLKLRVDEIEVKARI+    G     P+RL+ASS SG+WL+   + EYPDP+TGVT+Q+  L   +A   G+  ++PYP SN+VQ++R++ARR+G+TYA DFLGLMEV LI  W++               P  SMP    LFE+ ELVL  D +L+   R VG N +GMLAWH  ++TPEYP GRE+V+IANDVT QSGSFGV+EDDFF  ASEYAR+ G+PR+YIS NSGARIGLVE+LKP FKVAWND+SNPA GFKYLYL+ EDY +L+EGTV  T+    DGE R+ L DI+GQ+
Sbjct: 1136 VNTFHVALRSGEHEM----TDAAAV---VSQIESALKENTEDLKCLGVRMVNYLI-PQPPRLPRYFSFLECNGYSEEPLRRDMRPSFPYLLELTRLSINYDLTRIPALGRNAQLWIGTEKADDDVAISRPRPQTVFLRAISHSVDTETQAGAERLLLSAMDELERAMLHPLVTGAEQPKTPYPIQYGGASSKIFLHVLNEYEADTQSVIKNFKSILNMILSQHSTRLLKLRVDEIEVKARISYTVDGSVYTQPIRLVASSASGEWLKSAAYLEYPDPVTGVTRQYRALEEAQA---GVMQISPYPTSNTVQMKRSSARRVGSTYAFDFLGLMEVGLIQQWAKH--------------PSLSMPPSGSLFEAKELVLGEDNTLSPVSRPVGANDIGMLAWHATLKTPEYPNGREIVLIANDVTVQSGSFGVKEDDFFFKASEYARERGLPRLYISCNSGARIGLVEDLKPMFKVAWNDESNPASGFKYLYLTDEDYKSLKEGTVGATKTKGPDGEDRWALDDIVGQI 1636          
BLAST of mRNA_H-paniculata_contig1995.5094.1 vs. uniprot
Match: A0A7S1XJP6_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XJP6_9STRA)

HSP 1 Score: 491 bits (1264), Expect = 1.880e-157
Identity = 259/479 (54.07%), Postives = 334/479 (69.73%), Query Frame = 1
Query:  223 LQSAGVRMVSVLFRSQGARQPRYLSFRECMDYKEDPVRRDMRPSFPYIFELGRLAVNYNLERLPTVGRNSQIYLGVERGS------ALKRSTPQTLFLRAISHRQETYTMEGANQALLMAMDELERAMLDTRVNPACSTRIFLHMMPELTAV-PKQVVAEWKTVMDTLISRHATRLLKLRVDEIEVKARIATGEHGEREITPLRLMASSMSGQWLRMDGFEEYPDPITGVTKQWCKLT--------GGEADGEGMCMLNPYPASNSVQLRRAAARRIGTTYAPDFLGLMEVALIGMWSEFLADLKDAAGASGTPPMTSMPSPLFESDELVLQADGSLAKQFRMVGTNKVGMLAWHVVMRTPEYPGGRELVIIANDVTFQSGSFGVREDDFFKAASEYARKLGVPRIYISSNSGARIGLVEELKPKFKVAWNDDSNPAQGFKYLYLSPEDYGALEEGTVNTREVVVDGEKRYELTDIIGQ 1614
            L+ A VRMV+VL + +G+  P Y +F EC  + EDP+RRDMRP+FP + EL R++ N++LERL +VGRN+Q+YLGVE+          +R  PQ LFLRAISH  +  T  GA + LL + DELER++L   V    S+R+F+H++PE T   P  VV ++K +M  + +RHA++L+KL+VDEIEVK R+AT E GE  + PLRLMASSMSG+WLR+D + EYPDP+TG+TKQ+C ++           A    MC+L PYPASN VQ++R+AARRIGTTY  DFLGL EV ++  W E      +A       P++     +F+S ELVL A+G+L    R+VGTN +GM+ WHV M+TPEYP GRE+VIIANDVT QSGSFGV+EDD+F AAS YAR+ G+PRIY+SSNSGARIGLVEELKP   VAW D + PAQGF +LYL  EDY  LE+GTV   E   +GE    L DIIGQ
Sbjct:  298 LKDASVRMVNVL-QPRGSSFPSYYTFNECDKFAEDPLRRDMRPTFPQLLELRRVSKNFDLERLDSVGRNAQMYLGVEKADDAAATGGRRRPQPQALFLRAISHSNDVLTESGAERLLLQSFDELERSILSPAVASTVSSRLFVHVLPEFTGTNPADVVRDFKEMMRKICARHASQLIKLKVDEIEVKVRVAT-ESGE--VQPLRLMASSMSGEWLRLDAYLEYPDPVTGMTKQFCPVSETMSEEDLANAATPSNMCLLEPYPASNRVQMKRSAARRIGTTYCYDFLGLFEVEVLQAWEEHA----EAMRGGDLAPVSMPDGGVFKSQELVLDAEGNLVPSNRLVGTNDIGMVGWHVTMKTPEYPEGREIVIIANDVTHQSGSFGVKEDDYFYAASAYARERGIPRIYMSSNSGARIGLVEELKPLINVAWKDANVPAQGFDFLYLKKEDYEKLEDGTVIAHEATYNGESVMALDDIIGQ 768          
BLAST of mRNA_H-paniculata_contig1995.5094.1 vs. uniprot
Match: A0A7S2Y1X1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y1X1_9STRA)

HSP 1 Score: 462 bits (1190), Expect = 6.150e-154
Identity = 244/447 (54.59%), Postives = 322/447 (72.04%), Query Frame = 1
Query:  313 DYKEDPVRRDMRPSFPYIFELGRLAVNYNLERLPTVGRNSQIYLGVE-------RGSALKRSTPQTLFLRAISHRQETY--TMEGANQALLMAMDELERAMLDTRVNPACSTRIFLHMMPELTAVPKQVVAEWKTVMDTLISRHATRLLKLRVDEIEVKARIATGEHGEREITPLRLMASSMSGQWLRMDGFEEYPDPITGVTKQWCKLTGGEADGEGMCMLNPYPASNSVQLRRAAARRIGTTYAPDFLGLMEVALIGMWSEFLADL-KDAAGASGTPPMTSMPSPLFESDELVLQADGSLA--KQFRMVGTNKVGMLAWHVVMRTPEYPGGRELVIIANDVTFQSGSFGVREDDFFKAASEYARKLGVPRIYISSNSGARIGLVEELKPKFKVAWNDDSNPAQGFKYLYLSPEDYGALEEGTVNTREVVVDGEKRYELTDIIGQV 1617
            D+KEDPVRRDMR +FPY+ EL RL  N+NLER PTVGRN Q+YLG E       R +  +R   Q +F R I H  E      + A+  +  A+DEL+R M+D +V+P  S+RIF++++P      + +  E+  +MD++IS+ A RLLKLRVDEIEVK R+   ++ +  I PLRLMASSMSG+WLR D + EYPDP+TGVTKQ+C +     DGE +C+LNPYP SN +Q++RA ARR+G+TYA DFLGL EV L+ +W E+++ L K+  G  G   +  MP  +FE+ EL L+ +G L    + RMVGTN +GMLAWH  ++TPEYP GRE+V+I+ND+T QSGSFGV+ED+FF  ASEYAR+ G+PRIYISSNSGARIGLVEELKPKF+VAWND+ NP+ GFKY YL+ +++ AL +GTV+   V   GEKRY+L  IIGQ+
Sbjct:    7 DFKEDPVRRDMRATFPYLLELTRLNTNFNLERFPTVGRNFQMYLGEEAAPAGSARAATRRRQAQQVMFFRGIGHTAELLGEASDSASSIMNQALDELDRGMIDPKVSPFASSRIFINLIPAFKGDIESIKEEFNKLMDSVISQSANRLLKLRVDEIEVKVRL---QNEDGSIQPLRLMASSMSGEWLRTDVYFEYPDPVTGVTKQFCPVND---DGE-LCLLNPYPTSNQIQVKRATARRVGSTYAYDFLGLFEVTLLQVWDEYISSLNKETFG--GVEEVV-MPGNVFEAKELRLK-EGKLNVDDERRMVGTNNLGMLAWHCTLKTPEYPEGREMVLISNDITVQSGSFGVKEDEFFARASEYARQRGLPRIYISSNSGARIGLVEELKPKFRVAWNDEMNPSLGFKYTYLNEDEFKALPKGTVDAELVEDAGEKRYKLKSIIGQL 442          
BLAST of mRNA_H-paniculata_contig1995.5094.1 vs. uniprot
Match: L1JJM5_GUITC (Acetyl-CoA carboxylase n=2 Tax=Guillardia theta TaxID=55529 RepID=L1JJM5_GUITC)

HSP 1 Score: 491 bits (1265), Expect = 6.880e-153
Identity = 275/533 (51.59%), Postives = 357/533 (66.98%), Query Frame = 1
Query:   67 DTGKTTD-GEPINVIHVALMKSPEKMKEDDTDSSGVNEIISKVESVLHENDAVLQSAGVRMVSVLFRSQGARQPRYLSFRECMDYKEDPVRRDMRPSFPYIFELGRLAVNYNLERLPTVGRNSQIYLGVERGS---ALKRSTPQTLFLRAISHRQETYTMEGANQALLMAMDELERAMLDTRVNP-------------ACSTRIFLHMMPELTAVPKQVVAEWKTVMDTLISRHATRLLKLRVDEIEVKARIATGEHGEREITPLRLMASSMSGQWLRMDGFEEYPDPITGVTKQWCKLTGGEADGEGMCMLNPYPASNSVQLRRAAARRIGTTYAPDFLGLMEVALIGMWSEFLADLKDAAGASGTPPMTSMPSPLFESDELVLQADGSLAKQFRMVGTNKVGMLAWHVVMRTPEYPGGRELVIIANDVTFQSGSFGVREDDFFKAASEYARKLGVPRIYISSNSGARIGLVEELKPKFKVAWNDDSNPAQGFKYLYLSPEDYGALEEGTVN-TREVVVDGEKRYELTDIIG 1611
            D G T    E +N  H+A  K+ E +  DD       + I++ E VL EN +  ++ GVR V+ +   Q  + PRY +F EC D+ E+P+RRDMR SFPYI EL RL  NY+L R+P +GRN+Q+++G E+      + R  PQT+FLRA+SH  +T T  GA + +L AMDEL+RA+L   V               A STRIFLH++ E  A  + V+  +K+++D L+++H+TRLL+LRVDEIEVKARI+    G + I P+RL+ASS SG WL+ D + EYPDP+TGVTKQ+  L   +A   G+  ++PYP SN+VQ++RA ARR+G+TYA DFLGL EV LI  W +   DL+        PP  S    LFE+ ELVL ADG L +Q R VG+NK+GMLAW   M+TPEYP GRE+V+IANDVT QSGSFGV ED F+  ASEYARK G+PR+YI+ NSGARIGLVEELKPKFKVAWNDD +  +GFKYLYL+ +DY AL EGTV  T+     GE RY L  I+G
Sbjct: 1027 DNGATASPSEALNTFHIAF-KANEVITNDD-------QFIAEAERVLRENKSTFRALGVRHVNYIV-PQIPKAPRYFTFLECHDFSEEPLRRDMRASFPYILELTRLQGNYDLTRIPALGRNAQLWIGTEKPDDNVVVTRPRPQTIFLRALSHSVDTDTNSGAERLMLAAMDELDRALLHPLVTGQQRMKTPYPVQYGAASTRIFLHVLNEYEADTQSVIKGFKSILDNLLAKHSTRLLQLRVDEIEVKARISYVVDGRKHIQPIRLVASSTSGDWLKTDAYLEYPDPVTGVTKQFRSLEEAQA---GVMQISPYPTSNTVQMKRATARRVGSTYAFDFLGLFEVGLIQQWGK-RPDLQ-------MPPSGS----LFEAKELVLGADGELQQQVRPVGSNKIGMLAWVCKMKTPEYPNGREVVLIANDVTVQSGSFGVEEDQFYFKASEYARKRGLPRLYIACNSGARIGLVEELKPKFKVAWNDDKDTTKGFKYLYLTEDDYKALPEGTVQATKTSGPSGEVRYALDTIVG 1535          
BLAST of mRNA_H-paniculata_contig1995.5094.1 vs. uniprot
Match: A0A7R9U720_9STRA (Acetyl-CoA carboxylase n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U720_9STRA)

HSP 1 Score: 476 bits (1226), Expect = 2.540e-148
Identity = 263/516 (50.97%), Postives = 341/516 (66.09%), Query Frame = 1
Query:  100 NVIHVALMKSPEKMKEDDTDSSGVNEIISKVESVLHENDAVLQSAGVRMVSVLFRSQGARQPRYLSFRECMDYKEDPVRRDMRPSFPYIFELGRLAVNYNLERLPTVGRNSQIYLGVE--RGSA-----LKRSTPQTLFLRAISHRQETYTMEGANQALLMAMDELERAMLDTRVNPACSTRIFLHMMPELTA-VPKQVVAEWKTVMDTLISRHATRLLKLRVDEIEVKARIATGEHGEREITPLRLMASSMSGQWLRMDGFEEYPDPITGVTKQWCKLTGGEADG----EGMCMLNPYPASNSVQLRRAAARRIGTTYAPDFLGLMEVALIGMWSEFLADLKDAAGASGTPPMTSMPSPLFESDELVLQADGSLAKQFRMVGTNKVGMLAWHVVMRTPEYPGGRELVIIANDVTFQSGSFGVREDDFFKAASEYARKLGVPRIYISSNSGARIGLVEELKPKFKVAWNDDSNPAQGFKYLYLSPEDYGALEEGTVNTREVVVDGEKRYELTDIIG 1611
            NVIH A  +  E    D+T        + + E+V       L+ + VRMV++L   +G   P Y +F+EC  Y EDP+RRDMRP+FP + EL RL+ N++L+RL +VGRN Q+YLGVE  RG A      KR  PQ +FLRAISH  +     GA + LL + DELER +LD  V    S R+F+H++PE TA  P +VV  +K+ M  L++RHA+RL+ L+VDEIEVK R+A           LRLMASSMSG+WL +D + EYPDPITG+TKQ+C +   EA+G      MC++ PY  S  VQ++R+AARRIGTTYA D+LGL E+ ++  W+  + D    AG +    +   P  +F + ELV+ ADG L+   R+VGTN +GM+ WH  M+TPEYP GRE+VIIANDVTFQSGSFGV+EDDFF AAS YAR+ G+PRIY+SSNSGARIGLVEELKP   VAW D +NPAQGF YLYL+ ED+  L+ GTV   E   +G     L D+IG
Sbjct:  808 NVIHFAFSEQAE----DETKR------VQESEAVFTSAAEALRMSKVRMVNLL-TPRGQEFPAYYTFQECDTYVEDPLRRDMRPTFPQLLELSRLSENFDLKRLDSVGRNVQMYLGVEKERGDAPPPGARKRPRPQAIFLRAISHSSDVLGETGAERLLLQSFDELERTLLDPNVADTVSARLFVHVLPEFTANTPLEVVQMFKSRMRMLLARHASRLINLKVDEIEVKVRVAIETEDNSPPLSLRLMASSMSGEWLSLDAYLEYPDPITGMTKQFCPID--EAEGVPGPNAMCLMEPYKTSTRVQMKRSAARRIGTTYAYDYLGLFEIDILKEWANHI-DGMQLAGLT----VEDTPEGVFSATELVMGADGKLSPSDRLVGTNDIGMVGWHCTMKTPEYPEGREIVIIANDVTFQSGSFGVKEDDFFYAASSYARERGIPRIYLSSNSGARIGLVEELKPMLNVAWKDPANPAQGFDYLYLTQEDFANLKPGTVVAHEASYNGATVMALDDVIG 1305          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1995.5094.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FZG6_ECTSI2.610e-30682.00Acetyl-CoA carboxylase, partial n=1 Tax=Ectocarpus... [more]
A0A6H5L0S0_9PHAE2.480e-29181.67Acetyl-CoA carboxylase n=1 Tax=Ectocarpus sp. CCAP... [more]
A0A836CCC4_9STRA2.290e-21063.30Acetyl-CoA carboxylase n=1 Tax=Tribonema minus Tax... [more]
A0A0B4L7Y6_9STRA1.760e-17555.09Acetyl-CoA carboxylase n=1 Tax=Nannochloropsis ocu... [more]
I2CQP5_NANGC3.000e-17054.06Acetyl-CoA carboxylase n=1 Tax=Nannochloropsis gad... [more]
A0A7S1HMI4_HEMAN2.230e-16052.85Acetyl-CoA carboxylase n=2 Tax=Hemiselmis andersen... [more]
A0A7S1XJP6_9STRA1.880e-15754.07Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S2Y1X1_9STRA6.150e-15454.59Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
L1JJM5_GUITC6.880e-15351.59Acetyl-CoA carboxylase n=2 Tax=Guillardia theta Ta... [more]
A0A7R9U720_9STRA2.540e-14850.97Acetyl-CoA carboxylase n=1 Tax=Pinguiococcus pyren... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1995contigH-paniculata_contig1995:17284..23049 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score498.0
Seed ortholog evalue5.4e-138
Seed eggNOG ortholog55529.EKX48344
Preferred nameACC1
KEGG rclassRC00040,RC00253,RC00367
KEGG koko:K11262
KEGG ReactionR00742,R04385,R04386
KEGG Pathwayko00061,ko00254,ko00620,ko00640,ko01100,ko01110,ko01212,ko04152,ko04910,ko04922,map00061,map00254,map00620,map00640,map01100,map01110,map01212,map04152,map04910,map04922
KEGG ModuleM00082
Hectar predicted targeting categoryother localisation
EggNOG free text desc.acetyl-CoA carboxylase
EggNOG OGsCOG0439@1,KOG0368@2759
Ec32 ortholog descriptionAcetyl-CoA carboxylase, partial
Ec32 orthologEc-19_003230.1
EC2.1.3.15,6.3.4.14,6.4.1.2
COG Functional cat.I
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Exons12
Model size1617
Cds size1617
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1995.5094.1prot_H-paniculata_contig1995.5094.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig1995 17284..23049 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929504.0575929-CDS-H-paniculata_contig1995:17283..174091622929504.0575929-CDS-H-paniculata_contig1995:17283..17409Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1995 17284..17409 +
1691480889.4303672-CDS-H-paniculata_contig1995:17283..174091691480889.4303672-CDS-H-paniculata_contig1995:17283..17409Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1995 17284..17409 +
1622929504.0691361-CDS-H-paniculata_contig1995:17561..176631622929504.0691361-CDS-H-paniculata_contig1995:17561..17663Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1995 17562..17663 +
1691480889.4430811-CDS-H-paniculata_contig1995:17561..176631691480889.4430811-CDS-H-paniculata_contig1995:17561..17663Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1995 17562..17663 +
1622929504.0808806-CDS-H-paniculata_contig1995:18200..184071622929504.0808806-CDS-H-paniculata_contig1995:18200..18407Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1995 18201..18407 +
1691480889.451477-CDS-H-paniculata_contig1995:18200..184071691480889.451477-CDS-H-paniculata_contig1995:18200..18407Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1995 18201..18407 +
1622929504.092145-CDS-H-paniculata_contig1995:18914..190281622929504.092145-CDS-H-paniculata_contig1995:18914..19028Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1995 18915..19028 +
1691480889.4610655-CDS-H-paniculata_contig1995:18914..190281691480889.4610655-CDS-H-paniculata_contig1995:18914..19028Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1995 18915..19028 +
1622929504.1017058-CDS-H-paniculata_contig1995:19303..194441622929504.1017058-CDS-H-paniculata_contig1995:19303..19444Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1995 19304..19444 +
1691480889.469236-CDS-H-paniculata_contig1995:19303..194441691480889.469236-CDS-H-paniculata_contig1995:19303..19444Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1995 19304..19444 +
1622929504.1110284-CDS-H-paniculata_contig1995:19677..197851622929504.1110284-CDS-H-paniculata_contig1995:19677..19785Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1995 19678..19785 +
1691480889.476962-CDS-H-paniculata_contig1995:19677..197851691480889.476962-CDS-H-paniculata_contig1995:19677..19785Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1995 19678..19785 +
1622929504.123629-CDS-H-paniculata_contig1995:20023..202061622929504.123629-CDS-H-paniculata_contig1995:20023..20206Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1995 20024..20206 +
1691480889.4848025-CDS-H-paniculata_contig1995:20023..202061691480889.4848025-CDS-H-paniculata_contig1995:20023..20206Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1995 20024..20206 +
1622929504.136575-CDS-H-paniculata_contig1995:20713..207881622929504.136575-CDS-H-paniculata_contig1995:20713..20788Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1995 20714..20788 +
1691480889.493235-CDS-H-paniculata_contig1995:20713..207881691480889.493235-CDS-H-paniculata_contig1995:20713..20788Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1995 20714..20788 +
1622929504.1490774-CDS-H-paniculata_contig1995:21318..214051622929504.1490774-CDS-H-paniculata_contig1995:21318..21405Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1995 21319..21405 +
1691480889.502314-CDS-H-paniculata_contig1995:21318..214051691480889.502314-CDS-H-paniculata_contig1995:21318..21405Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1995 21319..21405 +
1622929504.1607127-CDS-H-paniculata_contig1995:21864..220591622929504.1607127-CDS-H-paniculata_contig1995:21864..22059Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1995 21865..22059 +
1691480889.5113254-CDS-H-paniculata_contig1995:21864..220591691480889.5113254-CDS-H-paniculata_contig1995:21864..22059Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1995 21865..22059 +
1622929504.1725109-CDS-H-paniculata_contig1995:22366..224861622929504.1725109-CDS-H-paniculata_contig1995:22366..22486Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1995 22367..22486 +
1691480889.5203402-CDS-H-paniculata_contig1995:22366..224861691480889.5203402-CDS-H-paniculata_contig1995:22366..22486Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1995 22367..22486 +
1622929504.1895666-CDS-H-paniculata_contig1995:22890..230491622929504.1895666-CDS-H-paniculata_contig1995:22890..23049Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1995 22891..23049 +
1691480889.5300717-CDS-H-paniculata_contig1995:22890..230491691480889.5300717-CDS-H-paniculata_contig1995:22890..23049Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1995 22891..23049 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig1995.5094.1

>prot_H-paniculata_contig1995.5094.1 ID=prot_H-paniculata_contig1995.5094.1|Name=mRNA_H-paniculata_contig1995.5094.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=539bp
MENMTPAKVAELAKIIQAKKDADTGKTTDGEPINVIHVALMKSPEKMKED
DTDSSGVNEIISKVESVLHENDAVLQSAGVRMVSVLFRSQGARQPRYLSF
RECMDYKEDPVRRDMRPSFPYIFELGRLAVNYNLERLPTVGRNSQIYLGV
ERGSALKRSTPQTLFLRAISHRQETYTMEGANQALLMAMDELERAMLDTR
VNPACSTRIFLHMMPELTAVPKQVVAEWKTVMDTLISRHATRLLKLRVDE
IEVKARIATGEHGEREITPLRLMASSMSGQWLRMDGFEEYPDPITGVTKQ
WCKLTGGEADGEGMCMLNPYPASNSVQLRRAAARRIGTTYAPDFLGLMEV
ALIGMWSEFLADLKDAAGASGTPPMTSMPSPLFESDELVLQADGSLAKQF
RMVGTNKVGMLAWHVVMRTPEYPGGRELVIIANDVTFQSGSFGVREDDFF
KAASEYARKLGVPRIYISSNSGARIGLVEELKPKFKVAWNDDSNPAQGFK
YLYLSPEDYGALEEGTVNTREVVVDGEKRYELTDIIGQV
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mRNA from alignment at H-paniculata_contig1995:17284..23049+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig1995.5094.1 ID=mRNA_H-paniculata_contig1995.5094.1|Name=mRNA_H-paniculata_contig1995.5094.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5766bp|location=Sequence derived from alignment at H-paniculata_contig1995:17284..23049+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGAGAATATGACACCCGCGAAGGTCGCGGAGCTTGCGAAGATCATCCA GGCTAAGAAGGATGCTGACACCGGAAAGACCACGGACGGGGAGCCGATCA ACGTTATCCACGTCGCTCTCATGAAGGTACGTTTTTTCTACTGCGATGGA CCTCGATCTTGATGGTTTCAAATTTCTAAATTTCGTGATCAAGAAAACAT TTCACTCACTGCGTGGATGATTTACACGAAATGTTGTTGCGTTTCCCACC TCTTGAACATGTCTTTTCGTTTGAGCAGTCACCTGAAAAGATGAAGGAGG ATGATACTGACAGCTCTGGGGTGAACGAGATCATTTCCAAGGTGGAATCG GTATTGCACGAGAACGACGCTGTGTTGCAGGTGCGACTCGAGCAGCAACG TCAAGAAGGATGACATTCTTGCTCTGATTTCGTGTGGAGAGCGTAAACGT GCTTGAGTGTGTGCTGCTGCTGCTGCTACCGATGGTTGTAAATGTGTTTC TGGGTAATCCTATCTGTGTAGCTTTTTGGACTCCTTCGTTTCTTGTACAC GTCATCGATTTCTGTTACCGTCAGCACTTGCAACGGACATGTGTTTTTCC ACATTGAAAATCCACCGGACGTATGACGCATGGTATTCGTCTGAAATTGT TTTGCAAATATTATAATCCGTCCGACGATAATTCAAGTCTTTTTCCGATT TTGATGATGGAAGCCAACGTGTTATGGGCGGAATTGGGAGAACGAGACAA AAGAAAAGATGTCAGAAGAGAAGATAAAAGTACCCGAATGTTTTACAACG GCCTTTTCATGATTTAGATCGTCTTATACTCCATTGTCCCTTCTTGGTAC ACTTTAACTTTTTTTTTTTTTTGTCACGGAACCGTCAATTAACGAACATT GCTCCTGTCGGAGTTAGTCGGCTGGCGTGCGGATGGTGAGCGTGCTGTTC AGGTCGCAAGGGGCGCGTCAGCCCCGCTATCTGAGCTTCCGGGAATGTAT GGATTACAAGGAAGACCCCGTCCGCCGAGACATGCGACCGTCGTTCCCTT ACATCTTCGAGCTGGGACGTCTGGCCGTCAACTATAACCTTGAGCGCCTG CCCACTGTGGGACGTAACAGTCAGGTACAAAATCTGAGCAATAGTGGGTA GTCACGGACCTACGCCAGAACGGGTGGGGTAGCTCGTGAACTGAGCATGA CTGGAAGTCTAGTCAGAGGTCTTTTAGTGGGTGCAGCAACCCTTACACTG CCTACTTGGTTCGGTCGAACCGGGGTGGCGCCTACGCCGCAGAGGAATAA ATAACGTTGTTCTGTTGAAGGAAATGTAGAAATACTTTGGTAGAAATACT CAAGTATAGAAGCATCGGATAAAGGTTTTTTCCTCAGCCTGCCGAGGATT AAAAAAAAAAAAAAAAGTGGGTAATTTGTAGGGAGTTTCTGTTTAAAGTG CCGATGAGGATATCTACTGACTTTGGGAAACTCTCTTCAGCATTCTGTAC ATGGATGAATAGATCGATGTTGCTTCTGCAATTCACTGGTTGAAAACGTT TGTGAAAATCTAACCATTGATTTGGATGTTTTATCTATGGTCGTTGGTTT TCGTGGCTTGTCTTCTTTGCTGTCAAAATAGATCTACCTGGGAGTGGAGC GGGGCAGCGCATTAAAGCGGTCTACCCCTCAGACGCTTTTCCTTCGGGCT ATTTCACACCGACAGGAGACGTACACTATGGAGGGTGCAAACCAGGTGTG TGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGTTTGTAAGCTTGCTCATG ATTGTTTTTCTCGTACTACGTTTTCAGTCTTGGGAGGACTGATTTGTTGT GTTCTAATGGTTTATTTGATCGCCACGGTTGTCTATTTCAGTTGTGGGTT GGGGGAGATTCAGCTATGGCCTCATCAATTGAGAAGCTCTTTTGCCGCTG TTGCTAGTAGTATTCTTTTTTCGTCGAGGTTTAGGTAAACCAATAATCCA GTGTGTATGCTTGATGTTAGGCACTCCTGATGGCGATGGACGAATTGGAG AGGGCCATGCTGGATACTCGCGTCAACCCCGCCTGCTCCACGCGCATCTT CTTGCACATGATGCCTGAGCTCACCGCCGTGCCCAAGCAGGTCGTCGCTG AGTGGAAAACGGTGAGTCCCTCCGTCGGAAAGTTGCATGTCGGGAATTCG CTGTGGGGATGCGTGGAAGTCTCGTCAACACGCACGGCAGGATTTTTCGT CTAATGTGAACCACCTTCAAATTGAAGCATGTGGGTCGGTAATTTCAAAG GGGCGATCGGATTCGACGCTTACCTGTCTTTCAAGAAATTCAAGGTTGTC TTTCGGCGTCTTTTTCCTGCGCTTGGTGGAAACGTTTCTGCAAGGTGATG GACACTCTGATCTCCCGGCACGCGACGAGATTGTTGAAGCTGCGTGTGGA CGAGATAGAAGTAAAGGCCCGGATCGCGACCGGAGAGCATGGGGAGCGAG AGGTATTGTTCACATAATTGGCTACGTTCTTATCAAGATTTTTCATCTGT TTTTCAGAGGGTTTACCTGAGAACTGAAAAAACGAGCTGTTCGCCAACGT CCATATACGTTGTGACCACCTCCTGATTTTATTGATTTATGTAAGGGGTT GTTTGTTTATCATGATGTTTTCCCGAAGATCTGGAAAGTCACTGATTTCG CGTTTTTTGGGTCGTAATTTTTGTCTTGAACGTTTCTCAGATTACTCCCC TCCGACTCATGGCCAGCTCCATGTCGGGGCAGTGGCTTCGCATGGATGGA TTCGAGGAATACCCCGATCCTATTACTGGGGTGACGAAGCAGTGGTGCAA GCTCACGGGGGGGGAGGCAGACGGGGAAGGCATGTGTATGCTGAACCCCT ACCCGGCCAGCAACTCTGTGCAGGTGAATGACTGACTAGAAAAGTACCTT TTTTGTTCCTTCTGCTGCCTCTTCTCTTCCCTCATATCTCCTCTTTTTTT TCTCCTCTCCATTCTAAGGACGTGTAGGCACGCAAACGTTTGAAGTCCCG TTAGCTGAAAGTGTGCCGAACTAACCGTAACCCTCAAGTATTCAGTTATT TTGTTGTCGGCTACCTAACCTTGGTTCGGCGTGTGTATCACCGTCCTCTG GAATTTGTGCAGATTCTGGAAAATGACATACTAAGCGTGTGTATATATGT CATAGGTATGCTCACAAAGGACCCGTGTTTTTACTCCTTTTTTTTCGTGT TGTTTTTTGGTTCTTGTGGCCCTTGAGATAGTTCAATTCGTTGCCCAGCG CCGCTGTTTTCAATTTTGATGATTGGTGGTTGGTACATAAACGGACACAC GGGGTTGTTCTGTTTTGTGGATCTACACTTGCGAGCCTTGTAAATGCACT CCTCTCTTGTGTTTTCTCCTGTGTCGACAGCTCCGCCGAGCCGCTGCCCG GCGAATCGGAACCACTTACGCGCCCGATTTCCTGGGGCTCATGGAAGTAG CACTTGTGAGTTCACATTTATGGGAAGGAAAGTTCTTGTATGTTCCCTTG TGTTGCATTTTGAGGGGGAAAAGGCCCGCTTGACAATTTACATCGGGCCT GAAGAATCTTGGGCTCATGTTCGTGTTTTCAACAATGTTGGGTGAGAAAA GGGTTGACTGTCCTGGACGTATTCGCTGATGGTGATGAGCTTTTCTCAGT AGAAACGGTACAATATGCTGTGTCACACGAAGGAAGAGGATTTTCATGCT GGCAATGTCGCGTACGGGGGTTCTGTAACGTCACCTGAAGAAGTTTGTTC TGTTATATTGGTGTATATATATATATATTTGTTTTTCTCGCTTTTTTGAA CTCGTAACATCACCTGAAATATCAATCTGGCCTTGTTCGTAATGTCTCGC CTTATATTATCCTGGGCTGAAGAAAAACAACTTGCGCGTTATCAGGAGAA ACGGTGGCTTTAATATCGTTTGTTTGATTTTTGTTTTTGGTTAACGGTTG TATGGGGGAAAATATTCTCTGTTGGACATTTCCAGATCGGAATGTGGAGT GAGTTCCTCGCGGACCTGAAGGATGCCGCGGGCGCTTCGGGGACTCCTCC GATGACTTCGATGCCTAGTCCTGTAAGTTGTTTCGACCGAGAAGGTTTCC GTGATGTTGAAGATAAACGCTACATCCATGTGTTCTCTGCTTGAATATTT TAGATATCGTGACGTCCTCGCTCGTTTATTTAATTGTTTGCAAAAATGGT TGTATAGGGGATTTGATGATTCGAGGTTTTTGGATTGATTTCAGGTATGG GCAGAGAATCGAGTCGTTCAAAGGCCGAAATGTACGAAAGAGCGAAGAAG GTAAGTACGTGCGGTGCGGGAGATCCGAACGTTCAGTGGATGGATACGAA AGTGTTAGTTCGCGATCTTGATGGTAGTAGTAAGTATCTAGCTGTCTCAG CCGATTATGTTAAAAACCCCTCTTGGGGGTTGTTTGTGCTTCATTCCTCT TGCGTTGCATCGACTTGCTTTTGTTGTTTCCTGCTATCTGATGGTGCGTA TAATGTTGGTGCTGAAAAAATAATACAAAAGCTGTTCGAGTCCGACGAGC TGGTTCTGCAGGCCGATGGGTCGTTGGCGAAGCAGTTCAGGATGGTCGGC ACGAACAAGGTCGGCATGTTGGCTTGGCACGTCGTGATGCGCACGCCTGA GTACCCAGGCGGACGAGAGCTGGTGATCATCGCCAACGATGTAACTTTCC AGTCAGGTTCCTTCGGTGTGCGGGAGGTCAGTTGATCAAGCGGTTCTCGG GGTACGGACACAGATTGAATTTGAGTAATAGACGGATGACGTCGCTAAAG TTCACTTTTGAAATCAGTATTTTGACGCTGATTCGAAACACCATTGTAAT GATTTCAACGGGCTCTTTTTGACGTTCGCACGCGTGCTACACTTGATACT TACACGGTTTTGCTCAGTTTTCGTCGTTGAGAGGTCATCTCGTTTCCCAT GGGTTTCTGTTGCATTGTAATGAAGGATACGTCATGTTCCTCGTTTTTGT GTTAACTTAACCGTGTATCTTCATTTGCATCAGGACGACTTTTTCAAGGC GGCATCCGAGTACGCCCGCAAGCTTGGGGTGCCTCGCATCTACATCTCTT CGAACTCTGGGGCACGCATTGGCCTGGTGGAGGAGCTCAAGCCCAAGTTC AAGGTTCGAGACTAATCTGTACTGTACATGTAGTTTTTATGGACCATACA AATGCTGTTTATTTCATGTTTTGAAGTCGATTATGTTGAAAGTTGATTCA CTTGTGGTGAAACTGACAGCGCCGCTAAAAAGATTATCCTCTACAAAAGC ATTGTCTGGGTGTTCATAAGTGTAGATGCAGGGGGTGGTTGAATGGTTGA ATGTGTTGGATGTCTTATCGTTCTGATAAGACGGTTCCAATTTTCGCGTT TCGTCGGGGAGAAACGCGTACTGTATTCATGGTCATGATTCGCGAATCAT ATAGTTTTCGGAGCCCGATATTTTGCTTCTGCCCGCGCAGCGTTTGTTGT CCCCCAATTTTTTCGATCACCCTATTTTTGTATGCTGATTGTTTTTCTTT TGCCCAGGTTGCTTGGAATGACGACTCTAACCCGGCTCAAGGCTTCAAGT ACCTATACCTATCTCCTGAAGACTATGGAGCACTGGAGGAAGGTACTGTC AATACTAGAGAGGTGGTGGTGGATGGGGAGAAGCGCTACGAGCTCACGGA TATCATCGGCCAGGTG
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Coding sequence (CDS) from alignment at H-paniculata_contig1995:17284..23049+

>mRNA_H-paniculata_contig1995.5094.1 ID=mRNA_H-paniculata_contig1995.5094.1|Name=mRNA_H-paniculata_contig1995.5094.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3234bp|location=Sequence derived from alignment at H-paniculata_contig1995:17284..23049+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGAGAATATGACACCCGCGAAGGTCGCGGAGCTTGCGAAGATCATCCA
GGCTAAGAAGGATGCTGACACCGGAAAGACCACGGACGGGGAGCCGATCA
ACGTTATCCACGTCGCTCTCATGAAGATGGAGAATATGACACCCGCGAAG
GTCGCGGAGCTTGCGAAGATCATCCAGGCTAAGAAGGATGCTGACACCGG
AAAGACCACGGACGGGGAGCCGATCAACGTTATCCACGTCGCTCTCATGA
AGTCACCTGAAAAGATGAAGGAGGATGATACTGACAGCTCTGGGGTGAAC
GAGATCATTTCCAAGGTGGAATCGGTATTGCACGAGAACGACGCTGTGTT
GCAGTCACCTGAAAAGATGAAGGAGGATGATACTGACAGCTCTGGGGTGA
ACGAGATCATTTCCAAGGTGGAATCGGTATTGCACGAGAACGACGCTGTG
TTGCAGTCGGCTGGCGTGCGGATGGTGAGCGTGCTGTTCAGGTCGCAAGG
GGCGCGTCAGCCCCGCTATCTGAGCTTCCGGGAATGTATGGATTACAAGG
AAGACCCCGTCCGCCGAGACATGCGACCGTCGTTCCCTTACATCTTCGAG
CTGGGACGTCTGGCCGTCAACTATAACCTTGAGCGCCTGCCCACTGTGGG
ACGTAACAGTCAGTCGGCTGGCGTGCGGATGGTGAGCGTGCTGTTCAGGT
CGCAAGGGGCGCGTCAGCCCCGCTATCTGAGCTTCCGGGAATGTATGGAT
TACAAGGAAGACCCCGTCCGCCGAGACATGCGACCGTCGTTCCCTTACAT
CTTCGAGCTGGGACGTCTGGCCGTCAACTATAACCTTGAGCGCCTGCCCA
CTGTGGGACGTAACAGTCAGATCTACCTGGGAGTGGAGCGGGGCAGCGCA
TTAAAGCGGTCTACCCCTCAGACGCTTTTCCTTCGGGCTATTTCACACCG
ACAGGAGACGTACACTATGGAGGGTGCAAACCAGATCTACCTGGGAGTGG
AGCGGGGCAGCGCATTAAAGCGGTCTACCCCTCAGACGCTTTTCCTTCGG
GCTATTTCACACCGACAGGAGACGTACACTATGGAGGGTGCAAACCAGGC
ACTCCTGATGGCGATGGACGAATTGGAGAGGGCCATGCTGGATACTCGCG
TCAACCCCGCCTGCTCCACGCGCATCTTCTTGCACATGATGCCTGAGCTC
ACCGCCGTGCCCAAGCAGGTCGTCGCTGAGTGGAAAACGGCACTCCTGAT
GGCGATGGACGAATTGGAGAGGGCCATGCTGGATACTCGCGTCAACCCCG
CCTGCTCCACGCGCATCTTCTTGCACATGATGCCTGAGCTCACCGCCGTG
CCCAAGCAGGTCGTCGCTGAGTGGAAAACGGTGATGGACACTCTGATCTC
CCGGCACGCGACGAGATTGTTGAAGCTGCGTGTGGACGAGATAGAAGTAA
AGGCCCGGATCGCGACCGGAGAGCATGGGGAGCGAGAGGTGATGGACACT
CTGATCTCCCGGCACGCGACGAGATTGTTGAAGCTGCGTGTGGACGAGAT
AGAAGTAAAGGCCCGGATCGCGACCGGAGAGCATGGGGAGCGAGAGATTA
CTCCCCTCCGACTCATGGCCAGCTCCATGTCGGGGCAGTGGCTTCGCATG
GATGGATTCGAGGAATACCCCGATCCTATTACTGGGGTGACGAAGCAGTG
GTGCAAGCTCACGGGGGGGGAGGCAGACGGGGAAGGCATGTGTATGCTGA
ACCCCTACCCGGCCAGCAACTCTGTGCAGATTACTCCCCTCCGACTCATG
GCCAGCTCCATGTCGGGGCAGTGGCTTCGCATGGATGGATTCGAGGAATA
CCCCGATCCTATTACTGGGGTGACGAAGCAGTGGTGCAAGCTCACGGGGG
GGGAGGCAGACGGGGAAGGCATGTGTATGCTGAACCCCTACCCGGCCAGC
AACTCTGTGCAGCTCCGCCGAGCCGCTGCCCGGCGAATCGGAACCACTTA
CGCGCCCGATTTCCTGGGGCTCATGGAAGTAGCACTTCTCCGCCGAGCCG
CTGCCCGGCGAATCGGAACCACTTACGCGCCCGATTTCCTGGGGCTCATG
GAAGTAGCACTTATCGGAATGTGGAGTGAGTTCCTCGCGGACCTGAAGGA
TGCCGCGGGCGCTTCGGGGACTCCTCCGATGACTTCGATGCCTAGTCCTA
TCGGAATGTGGAGTGAGTTCCTCGCGGACCTGAAGGATGCCGCGGGCGCT
TCGGGGACTCCTCCGATGACTTCGATGCCTAGTCCTCTGTTCGAGTCCGA
CGAGCTGGTTCTGCAGGCCGATGGGTCGTTGGCGAAGCAGTTCAGGATGG
TCGGCACGAACAAGGTCGGCATGTTGGCTTGGCACGTCGTGATGCGCACG
CCTGAGTACCCAGGCGGACGAGAGCTGGTGATCATCGCCAACGATGTAAC
TTTCCAGTCAGGTTCCTTCGGTGTGCGGGAGCTGTTCGAGTCCGACGAGC
TGGTTCTGCAGGCCGATGGGTCGTTGGCGAAGCAGTTCAGGATGGTCGGC
ACGAACAAGGTCGGCATGTTGGCTTGGCACGTCGTGATGCGCACGCCTGA
GTACCCAGGCGGACGAGAGCTGGTGATCATCGCCAACGATGTAACTTTCC
AGTCAGGTTCCTTCGGTGTGCGGGAGGACGACTTTTTCAAGGCGGCATCC
GAGTACGCCCGCAAGCTTGGGGTGCCTCGCATCTACATCTCTTCGAACTC
TGGGGCACGCATTGGCCTGGTGGAGGAGCTCAAGCCCAAGTTCAAGGACG
ACTTTTTCAAGGCGGCATCCGAGTACGCCCGCAAGCTTGGGGTGCCTCGC
ATCTACATCTCTTCGAACTCTGGGGCACGCATTGGCCTGGTGGAGGAGCT
CAAGCCCAAGTTCAAGGTTGCTTGGAATGACGACTCTAACCCGGCTCAAG
GCTTCAAGTACCTATACCTATCTCCTGAAGACTATGGAGCACTGGAGGAA
GGTACTGTCAATACTAGAGAGGTGGTGGTGGATGGGGAGAAGCGCTACGA
GCTCACGGATATCATCGGCCAGGTGGTTGCTTGGAATGACGACTCTAACC
CGGCTCAAGGCTTCAAGTACCTATACCTATCTCCTGAAGACTATGGAGCA
CTGGAGGAAGGTACTGTCAATACTAGAGAGGTGGTGGTGGATGGGGAGAA
GCGCTACGAGCTCACGGATATCATCGGCCAGGTG
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