prot_H-paniculata_contig1994.5090.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1994.5090.1
Unique Nameprot_H-paniculata_contig1994.5090.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length523
Homology
BLAST of mRNA_H-paniculata_contig1994.5090.1 vs. uniprot
Match: D8LKW0_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKW0_ECTSI)

HSP 1 Score: 194 bits (493), Expect = 5.810e-51
Identity = 93/112 (83.04%), Postives = 103/112 (91.96%), Query Frame = 0
Query:  192 GERCSICLDPWTSKGNHRICTLHCGHLFGKSCIERWLKERRSCPQCGGKVGARGSGRVIPLFLTNLVAKDTGELETARQQRDQEKRLRKQCEAERVRLSIQNESLKDQLSRL 303
            GERCSICLDPWTSKG HRICTL CGHLFG+SCIERWLKERRSCPQCG KVGA+G+ R+IPLFL NLVA+DTGELETAR   ++EKRLRKQCEAERVR+SI+N SLKD+LSRL
Sbjct:   42 GERCSICLDPWTSKGKHRICTLLCGHLFGQSCIERWLKERRSCPQCGTKVGAKGTNRIIPLFLHNLVAQDTGELETARTLLEEEKRLRKQCEAERVRVSIENASLKDRLSRL 153          
BLAST of mRNA_H-paniculata_contig1994.5090.1 vs. uniprot
Match: A0A6H5JB60_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB60_9PHAE)

HSP 1 Score: 195 bits (496), Expect = 1.000e-50
Identity = 93/112 (83.04%), Postives = 103/112 (91.96%), Query Frame = 0
Query:  192 GERCSICLDPWTSKGNHRICTLHCGHLFGKSCIERWLKERRSCPQCGGKVGARGSGRVIPLFLTNLVAKDTGELETARQQRDQEKRLRKQCEAERVRLSIQNESLKDQLSRL 303
            GERCSICLDPWTSKG HRICTL CGHLFG+SCIERWLKERRSCPQCG KVGA+G+ R+IPLFL NLVA+DTGELETAR   ++EKRLRKQCEAERVR+SI+N SLKD+LSRL
Sbjct:  117 GERCSICLDPWTSKGKHRICTLLCGHLFGQSCIERWLKERRSCPQCGAKVGAKGTNRIIPLFLQNLVAQDTGELETARTLLEEEKRLRKQCEAERVRVSIENASLKDRLSRL 228          
BLAST of mRNA_H-paniculata_contig1994.5090.1 vs. uniprot
Match: A0A267GDQ9_9PLAT (RING-type domain-containing protein n=1 Tax=Macrostomum lignano TaxID=282301 RepID=A0A267GDQ9_9PLAT)

HSP 1 Score: 103 bits (258), Expect = 1.920e-20
Identity = 50/111 (45.05%), Postives = 69/111 (62.16%), Query Frame = 0
Query:  193 ERCSICLDPWTSKGNHRICTLHCGHLFGKSCIERWLKERRSCPQCGGKVGARGSGRVIPLFLTNLVAKDTGELETARQQRDQEKRLRKQCEAERVRLSIQNESLKDQLSRL 303
            E C+IC +PWTS G HR+C L CGHLFGKSC+ERWL+ R+ CPQC           V+PL++TNL A D  E E  + + D+ KR +   E E   + ++ + L+D+  RL
Sbjct:  245 EGCTICFEPWTSSGEHRVCALRCGHLFGKSCVERWLETRQQCPQCNRNCRRH---EVLPLYVTNLRAVDNSENEALKLEIDKIKRAKLTAEQEAGDMRLRLDMLRDENRRL 352          
BLAST of mRNA_H-paniculata_contig1994.5090.1 vs. uniprot
Match: A0A1I8IIU3_9PLAT (RING-type domain-containing protein n=1 Tax=Macrostomum lignano TaxID=282301 RepID=A0A1I8IIU3_9PLAT)

HSP 1 Score: 103 bits (258), Expect = 5.880e-20
Identity = 50/111 (45.05%), Postives = 69/111 (62.16%), Query Frame = 0
Query:  193 ERCSICLDPWTSKGNHRICTLHCGHLFGKSCIERWLKERRSCPQCGGKVGARGSGRVIPLFLTNLVAKDTGELETARQQRDQEKRLRKQCEAERVRLSIQNESLKDQLSRL 303
            E C+IC +PWTS G HR+C L CGHLFGKSC+ERWL+ R+ CPQC           V+PL++TNL A D  E E  + + D+ KR +   E E   + ++ + L+D+  RL
Sbjct:  245 EGCTICFEPWTSSGEHRVCALRCGHLFGKSCVERWLETRQQCPQCNRNCRRH---EVLPLYVTNLRAVDNSENEALKLEIDKIKRAKLTAEQEAGDMRLRLDMLRDENRRL 352          
BLAST of mRNA_H-paniculata_contig1994.5090.1 vs. uniprot
Match: A0A267DN52_9PLAT (RING-type domain-containing protein n=4 Tax=Macrostomum lignano TaxID=282301 RepID=A0A267DN52_9PLAT)

HSP 1 Score: 103 bits (258), Expect = 1.000e-19
Identity = 50/111 (45.05%), Postives = 69/111 (62.16%), Query Frame = 0
Query:  193 ERCSICLDPWTSKGNHRICTLHCGHLFGKSCIERWLKERRSCPQCGGKVGARGSGRVIPLFLTNLVAKDTGELETARQQRDQEKRLRKQCEAERVRLSIQNESLKDQLSRL 303
            E C+IC +PWTS G HR+C L CGHLFGKSC+ERWL+ R+ CPQC           V+PL++TNL A D  E E  + + D+ KR +   E E   + ++ + L+D+  RL
Sbjct:  245 EGCTICFEPWTSSGEHRVCALRCGHLFGKSCVERWLETRQQCPQCNRNCRRH---EVLPLYVTNLRAVDNSENEALKLEIDKIKRAKLTAEQEAGDMRLRLDMLRDENRRL 352          
BLAST of mRNA_H-paniculata_contig1994.5090.1 vs. uniprot
Match: A0A813Y3E3_9BILA (Hypothetical protein n=1 Tax=Brachionus calyciflorus TaxID=104777 RepID=A0A813Y3E3_9BILA)

HSP 1 Score: 95.9 bits (237), Expect = 2.880e-17
Identity = 49/109 (44.95%), Postives = 68/109 (62.39%), Query Frame = 0
Query:  193 ERCSICLDPWTSKGNHRICTLHCGHLFGKSCIERWLKERRSCPQCGGKVGARGSGRVIPLFLTNLVAKDTGELETARQQRDQEKRLRKQCEAERVRLSIQNESLKDQLS 301
            E CSICL+PWT+ G HR+  L CGHLFG+ CIERWLK    CPQC  +   R   R I  +   L   DT EL+ A +  + E++LRK+CE E   + ++ + ++D+LS
Sbjct:   93 ETCSICLEPWTNSGIHRLVCLKCGHLFGEGCIERWLKTNPKCPQCN-RPSKRSDIRRI--YARALKVIDTAELDKALKDLEDERQLRKKCEIETSEIKLRFQIVRDELS 198          
BLAST of mRNA_H-paniculata_contig1994.5090.1 vs. uniprot
Match: UPI000549B7D8 (E3 ubiquitin-protein ligase RFWD3-like isoform X1 n=2 Tax=Meleagris gallopavo TaxID=9103 RepID=UPI000549B7D8)

HSP 1 Score: 94.4 bits (233), Expect = 3.260e-17
Identity = 49/114 (42.98%), Postives = 72/114 (63.16%), Query Frame = 0
Query:  192 GERCSICLDPWTSKGNHRICTLHCGHLFGKSCIERWLK-ERRSCPQCGGKVGARGSGRVIPLFLTNLVAKDTGELETARQQRDQEKRLRKQCEAERVRLSIQNESLKDQLSRLK 304
            G+ C+IC +PWT+ G HR+  L CGHLFG +CI+RWLK +   CPQC  K  A+ S  V+ L+   L A DT E E  +   ++E++LR+Q E E  +  +Q + L D+ S+L+
Sbjct:  263 GDTCAICFEPWTNAGEHRLSALRCGHLFGYTCIDRWLKGQAGKCPQCNKK--AKRSDIVV-LYARTLKALDTSEQERVKSSLEKEQKLRRQAELESAQSRLQLQVLTDECSKLR 373          
BLAST of mRNA_H-paniculata_contig1994.5090.1 vs. uniprot
Match: A0A851UBM4_9PASS (RFWD3 ligase (Fragment) n=2 Tax=Passeriformes TaxID=9126 RepID=A0A851UBM4_9PASS)

HSP 1 Score: 95.9 bits (237), Expect = 3.950e-17
Identity = 51/114 (44.74%), Postives = 71/114 (62.28%), Query Frame = 0
Query:  192 GERCSICLDPWTSKGNHRICTLHCGHLFGKSCIERWLK-ERRSCPQCGGKVGARGSGRVIPLFLTNLVAKDTGELETARQQRDQEKRLRKQCEAERVRLSIQNESLKDQLSRLK 304
            G+ C+IC + WT+ G HR+C L CGHLFG +CIERWLK +   CPQC  K  A+ S  V+ L+   L A DT E E  R   ++E+ LR+Q E E  +  +Q + L D+ S+L+
Sbjct:  256 GDTCAICFEQWTNAGEHRLCALRCGHLFGYTCIERWLKGQAGKCPQCNKK--AKRSDIVV-LYARTLKALDTSEQERMRSSLEKEQMLRRQAELESAQSRLQLQVLTDECSKLR 366          
BLAST of mRNA_H-paniculata_contig1994.5090.1 vs. uniprot
Match: A0A091WF64_OPIHO (E3 ubiquitin-protein ligase RFWD3 (Fragment) n=2 Tax=Opisthocomus hoazin TaxID=30419 RepID=A0A091WF64_OPIHO)

HSP 1 Score: 95.5 bits (236), Expect = 4.270e-17
Identity = 51/114 (44.74%), Postives = 73/114 (64.04%), Query Frame = 0
Query:  192 GERCSICLDPWTSKGNHRICTLHCGHLFGKSCIERWLK-ERRSCPQCGGKVGARGSGRVIPLFLTNLVAKDTGELETARQQRDQEKRLRKQCEAERVRLSIQNESLKDQLSRLK 304
            G+ C+IC +PWT+ G+HR+  L CGHLFG +CIERWLK +   CPQC  K  A+ S  VI L+   L A DT E E  +   ++E++LR+Q E E  +  +Q + L D+ S+L+
Sbjct:  134 GDTCAICFEPWTNAGDHRLSALRCGHLFGYTCIERWLKGQAGKCPQCNKK--AKRSDIVI-LYARTLKALDTSEQERMKSSLEKEQKLRRQAELESAQSRLQLQVLTDEWSKLR 244          
BLAST of mRNA_H-paniculata_contig1994.5090.1 vs. uniprot
Match: A0A7K5DY35_POLCE (RFWD3 ligase (Fragment) n=1 Tax=Polioptila caerulea TaxID=66707 RepID=A0A7K5DY35_POLCE)

HSP 1 Score: 95.5 bits (236), Expect = 5.280e-17
Identity = 51/114 (44.74%), Postives = 72/114 (63.16%), Query Frame = 0
Query:  192 GERCSICLDPWTSKGNHRICTLHCGHLFGKSCIERWLK-ERRSCPQCGGKVGARGSGRVIPLFLTNLVAKDTGELETARQQRDQEKRLRKQCEAERVRLSIQNESLKDQLSRLK 304
            G+ C+IC + WT+ G+HR+C L CGHLFG +CIERWLK +   CPQC  K  A+ S  VI L+   L A DT E E  +   ++E+ LR+Q E E  +  +Q + L D+ S+L+
Sbjct:  262 GDTCAICFEQWTNAGDHRLCALRCGHLFGYTCIERWLKGQAGKCPQCNKK--AKRSDIVI-LYARTLKALDTSEQERMKSSLEKEQMLRRQAELESAQSRLQLQVLTDECSKLR 372          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1994.5090.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LKW0_ECTSI5.810e-5183.04RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JB60_9PHAE1.000e-5083.04RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A267GDQ9_9PLAT1.920e-2045.05RING-type domain-containing protein n=1 Tax=Macros... [more]
A0A1I8IIU3_9PLAT5.880e-2045.05RING-type domain-containing protein n=1 Tax=Macros... [more]
A0A267DN52_9PLAT1.000e-1945.05RING-type domain-containing protein n=4 Tax=Macros... [more]
A0A813Y3E3_9BILA2.880e-1744.95Hypothetical protein n=1 Tax=Brachionus calyciflor... [more]
UPI000549B7D83.260e-1742.98E3 ubiquitin-protein ligase RFWD3-like isoform X1 ... [more]
A0A851UBM4_9PASS3.950e-1744.74RFWD3 ligase (Fragment) n=2 Tax=Passeriformes TaxI... [more]
A0A091WF64_OPIHO4.270e-1744.74E3 ubiquitin-protein ligase RFWD3 (Fragment) n=2 T... [more]
A0A7K5DY35_POLCE5.280e-1744.74RFWD3 ligase (Fragment) n=1 Tax=Polioptila caerule... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 265..306
NoneNo IPR availableCOILSCoilCoilcoord: 84..114
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 186..242
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 195..237
e-value: 9.0E-5
score: 31.9
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 194..237
e-value: 2.0E-10
score: 40.9
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 195..237
score: 11.825
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 166..323
e-value: 2.9E-16
score: 61.3
IPR037381E3 ubiquitin-protein ligase RFWD3PANTHERPTHR16047RFWD3 PROTEINcoord: 87..328

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1994contigH-paniculata_contig1994:5700..20998 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1994.5090.1mRNA_H-paniculata_contig1994.5090.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1994 5700..20999 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1994.5090.1 ID=prot_H-paniculata_contig1994.5090.1|Name=mRNA_H-paniculata_contig1994.5090.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=523bp
MPFLLNLSKSWIRITRAIIYHYHHTIFELLLSIPVCHNFEYHRADDTRRH
VVSRSGCIGTMNPSEHDYSSVVVDLTIIDDDDTADDERQEDEQQESEKEQ
SEKEESEEDEEEADSFGDRRSISSGDSFELSALSHSRSLSRTSPLTAVPE
SSVSGVVSGTVLSNEARSAKGKRKRMPMASSSSEQEEKEGDGERCSICLD
PWTSKGNHRICTLHCGHLFGKSCIERWLKERRSCPQCGGKVGARGSGRVI
PLFLTNLVAKDTGELETARQQRDQEKRLRKQCEAERVRLSIQNESLKDQL
SRLKLRQLQHDAQAKAIASSSSSSAAAAAAASPALTSLRDHQHTSNIGTK
RPSPNPYSWKRDLIREPVVGTRSTPGRHPAPLFRLPDDTPNKTRLPPDNN
NTTTTTTTQDSLSPSPSSSPRLTCATTVTTRQSGTAPPTSTLTPMPTPAR
TPSTSILRIDPLNVYFRVPVRDRDSRGGPTEHASAGPMAKTAITTSSRRL
MAPAAGVTVGGASGSGRGVITEG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
IPR037381RFWD3