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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 2498 |
| Cds size | 1314 |
| Stop | 1 |
| Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig19917.5087.1 >prot_H-paniculata_contig19917.5087.1 ID=prot_H-paniculata_contig19917.5087.1|Name=mRNA_H-paniculata_contig19917.5087.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=438bp
GRAPTDTVKEALQGGLSAPRGVGGRGGSGRRGGRDEEQDERGGSRGGYRR
GQRYDVHSRDRDERERDGAGCEDYGIDEGDFPPVGVVEEERWQPEQLEDD
DEGFGGNRGAKRHADDDDDRASAKKQKPVPRKVTVVAAEQYQPRAAAGRT
SVRNADDRDSSPSPSPPPWSSRRDGSRRDRSVDSRDSHGDGEEGRRKVRH
EPVREVVVREVRDVPSRPAPQAVGRVDDGARTAPKGDKGPGGGRDRVKGY
EEESRSRAGGGGERTERDEQRRSSGGGGREEGGGEGSGRGRREVSEAQSG
GRGSRGRDDNGTLKKSASRGKGSGTVVVDRKNGTNEKNKDTPQRRDMPQR
EDKRQGRRRGRRRSRSESSSSGSSSDSGSSSDSGSGSSSSSSGSSSSSSD
SGSSSDSESSSSSDSASSSSASPSPVRSSKKRSREKR* back to topmRNA from alignment at H-paniculata_contig19917:242..3761+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig19917.5087.1 ID=mRNA_H-paniculata_contig19917.5087.1|Name=mRNA_H-paniculata_contig19917.5087.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3520bp|location=Sequence derived from alignment at H-paniculata_contig19917:242..3761+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGTAGGGCGCCCACAGATACCGTCAAAGAAGCGCTCCAAGGCGGGCTAAG
TGCCCCGCGCGGTGTTGGTGGGCGTGGGGGAAGCGGCAGGCGTGGCGGTA
GAGATGAAGAGCAGGTGAGGGAGGATGTACCGAGCCAAACTCAATTTTTG
ATTGTAAAAACTGAAAAGCTTCATGATATTTTGCAGGACCAATTCGCTCT
TGACTTTCCTTTAGTCTACAGTTGTTATTGGTGAAGATATTTACGTTCCT
TCACGATCCGAACCGTGAGCTCTTGAGAATATCGGTATCATCGAGGTCCG
AACGTAATCAAACGCGATTATTTCGACAAGTACAGCGCTACTGACAAGAA
ACAGGGTTCTGTTGGAAAGATGTTGCATCGATATATCGATTGACGGGTTC
TTTCGACCGCGCAAGTCTCCCTTCTCCACATAGTCGTATCTGAAAATAGA
TGTTACCCCGGTGCGATACCGCGATACCCCCCTCCCGGATTTTACGGTAC
CGACGGCTGCCGAATGTGCGATGTACGTGACCCGTTACCCGCGATGGGGA
TGCTCCATTGAAACCGTGGTCAACTCCAGCTTGGCGTACTCGTAAATCTG
GATAATGACTAGTTTAGCCCTTATGGAGTGCGCCTCATCGGCGAGATCTC
GGTATACCAATCCGTCCCCCGATTGTCAAGGTGCGAGATCAATGGTAGTC
TCAAGACGGCATTCGAATGCGATGAAGAAATTTGATTTTGAGAAATTCAG
GGCACCAATCTTTTTGTGACGTGTTGAATATTTTTTCTCAAGAACCGCAG
CTCACTTTGTAAAGACATATTTTAATCTCCATATACTGGATACAAGAAAC
TCTAATTCTTCGTGAGGCTAGCGTTCGAGTAGGCTATGCTGAAATGAAGG
TAAAAATAGTTGCTGGATAGTGTGACGATGTCGAGATGTCCAGGGAAAAA
AATGTTTCGTTCTTCCCTCGACCCCGAATTGTAACAGATGTGGACTATGC
TAACTTTTGTTTGGTTATGCTAGTAGGGAGTCAGCGGCGGCGATTTTTTT
TTTTTTTTTTTCCCCTTTTTCCAAGTGTTGTCGTGGGGTACTGTATACAA
CACACCCCGCACCTGTCGTGACGATAATCCTTTACAGGACGAGCGCGGCG
GCAGCCGCGGCGGGTACCGACGCGGGCAGAGGTACGACGTGCACTCCCGT
GACAGAGATGAAAGAGAAAGAGACGGGGCGGGGTGCGAGGACTACGGCAT
TGACGAGGGCGATTTCCCACCAGTCGGGGTTGTGGAAGAAGAGCGGTGGC
AGCCGGAACAACTGGAGGATGACGATGAGGGGTTTGGGGGCAACAGGGGA
GCAAAGAGGCACGCTGATGATGACGACGATCGCGCGTCCGCTAAGAAGCA
GAAGCCCGTGCCTCGCAAAGTTACAGTGGTGGCCGCCGAGCAGTATCAGC
CGCGTGCGGCGGCTGGGCGGACGTCGGTCAGAAACGCTGATGACAGAGAC
TCGTCGCCGTCACCGTCTCCTCCGCCGTGGTCATCCCGTCGGGATGGCAG
TAGAAGGGACAGGAGCGTGGACAGCCGAGACAGTCATGGGGATGGAGAGG
AGGGGAGGCGCAAGGTAAGGCATGAGCCGGTGCGCGAAGTGGTCGTCCGT
GAGGTCCGCGACGTCCCTTCTCGCCCTGCTCCTCAGGCTGTGGGCAGAGT
CGACGACGGAGCTAGGACGGCCCCTAAGGGTGATAAAGGCCCCGGTGGCG
GGAGGGATCGTGTGAAAGGTTACGAAGAGGAATCGAGATCGCGGGCTGGG
GGCGGCGGCGAACGTACTGAGCGCGATGAGCAACGCCGCAGTAGTGGTGG
TGGTGGTCGTGAGGAAGGGGGTGGTGAAGGTAGTGGCCGCGGTCGGCGTG
AGGTGTCCGAGGCGCAGAGTGGTGGGCGGGGTAGTAGGGGGAGAGATGAC
AACGGGACGCTGAAGAAAAGTGCGAGTAGAGGCAAGGGAAGCGGTACCGT
GGTGGTTGACCGTAAGAACGGGACCAATGAGAAAAATAAGGACACCCCGC
AGAGAAGGGACATGCCGCAGAGAGAGGACAAGCGGCAGGGCCGCCGCAGA
GGTCGTCGTCGATCGCGCAGCGAGAGTTCCTCTTCTGGGTCATCGTCGGA
TTCGGGGTCTTCGTCGGATTCCGGATCGGGTTCGTCTTCGTCTTCGTCGG
GTTCGAGCTCGTCTTCATCGGATTCGGGGTCTTCATCGGATTCTGAGTCT
TCGTCTTCATCGGATTCCGCTTCCTCTTCGTCCGCGTCACCGTCTCCTGT
GCGCTCTTCGAAAAAGCGCAGCCGCGAGAAGAGGTGATTATCTTGTCTCG
GTCATGGCGATGATGATCATGAGTCTGCGTCTTTGTAAGCAAGGGAAGGG
GGTTCCGCTCTGTGGGGTTTGGTGCTGACTGGTGTTCGTTTTGTGGCTTG
GCGACGTGTGTTTGTCCTTCTCTACGACAACACCCAGCCTTATTTATTGC
TGTCTACCAGAATCTAACGGTACTGTTGAGTGTAGTTGACTAGGGTACGA
AGTACCGGCTGCCGACGATGCCCTAGTGCACCTGGGGGAGGGGGAAGTAG
TTGGTTCGGGGGATAGGAGGGTAGGTCTGGACACGTGTGCAGCTTTCACA
AGTCAGGAAGAGCCTTGGAATGATAAAGGGGTATCTTTATGGTTGCGTCC
TGTAAGTTGAATTTCTGCAAGGCGAAGGGAATCGGGGGTTACCGTGGTGA
CAAAAAAGTCATGTATGATGATGCCTTATTTCAAGGCCGTCGATGTTGAT
CGATTTTCGCACTTGGAACGCCTGACGAAGGATGAATATGACAGTAAATA
CGAGAGGAAAACGGAGTATGGTGGTGTGCTCATATTCAGCAGCCTCTAGT
CAGCTAACGGTTTTCTTCGTGTCGTTGTCAGTGGAGATGAATCGTTGGTG
TGTTACGAGGGTTTGGCGTCTATGGCGGTTCTAATACTGCTGTTGTCCAA
GAAGAAAAGTTCAGTTAGTGTATGGCCGTCAGATGACACCGACTGTGAGG
AGGGTAGCATACATGCATGACAACATGAAATTTTAAACAGATTGTGGGTC
ATCGGCCGGCGGGAGGTGACTTATTACTTGGATTTGTTTTCGTTTCCAAA
AGAGAAAAGTTCCAAAGTAGGGAGCGCCAGCTCTGTGTTGCGAACTCGGT
TTATCTTATCGTGCGAATCCCCGTGGAATAATCGAGCGTGATACCAGGTA
CTGCCGGCATCTCTCCCTCTCATGTTGCTTCCACCATCACAGCTGGCAAG
CAGGAAAGTGGGTGCAGACACGTGTATATGTCTTCAGCTTGCTGTCTGTT
TGTCTGATAAGCCGGGGGCAAACATGTGTTACCGGTTGGTAGGGTAACAA
TCACAGGTGAAACTAGATGACATCAGCGTCCGTTGAGGTTTGATGTTTCT
CATGTTGGGTCCTCTGCTCCCGGGATATGGGCATTCAAAGCCACAATCTA
GCAGCCATTCACGGTTCCCC back to topCoding sequence (CDS) from alignment at H-paniculata_contig19917:242..3761+ >mRNA_H-paniculata_contig19917.5087.1 ID=mRNA_H-paniculata_contig19917.5087.1|Name=mRNA_H-paniculata_contig19917.5087.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2628bp|location=Sequence derived from alignment at H-paniculata_contig19917:242..3761+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGTAGGGCGCCCACAGATACCGTCAAAGAAGCGCTCCAAGGCGGGCTAAG
TGCCCCGCGCGGTGTTGGTGGGCGTGGGGGAAGCGGCAGGCGTGGCGGTA
GAGATGAAGAGCAGGGTAGGGCGCCCACAGATACCGTCAAAGAAGCGCTC
CAAGGCGGGCTAAGTGCCCCGCGCGGTGTTGGTGGGCGTGGGGGAAGCGG
CAGGCGTGGCGGTAGAGATGAAGAGCAGGACGAGCGCGGCGGCAGCCGCG
GCGGGTACCGACGCGGGCAGAGGTACGACGTGCACTCCCGTGACAGAGAT
GAAAGAGAAAGAGACGGGGCGGGGTGCGAGGACTACGGCATTGACGAGGG
CGATTTCCCACCAGTCGGGGTTGTGGAAGAAGAGCGGTGGCAGCCGGAAC
AACTGGAGGATGACGATGAGGGGTTTGGGGGCAACAGGGGAGCAAAGAGG
CACGCTGATGATGACGACGATCGCGCGTCCGCTAAGAAGCAGAAGCCCGT
GCCTCGCAAAGTTACAGTGGTGGCCGCCGAGCAGTATCAGCCGCGTGCGG
CGGCTGGGCGGACGTCGGTCAGAAACGCTGATGACAGAGACTCGTCGCCG
TCACCGTCTCCTCCGCCGTGGTCATCCCGTCGGGATGGCAGTAGAAGGGA
CAGGAGCGTGGACAGCCGAGACAGTCATGGGGATGGAGAGGAGGGGAGGC
GCAAGGTAAGGCATGAGCCGGTGCGCGAAGTGGTCGTCCGTGAGGTCCGC
GACGTCCCTTCTCGCCCTGCTCCTCAGGCTGTGGGCAGAGTCGACGACGG
AGCTAGGACGGCCCCTAAGGGTGATAAAGGCCCCGGTGGCGGGAGGGATC
GTGTGAAAGGTTACGAAGAGGAATCGAGATCGCGGGCTGGGGGCGGCGGC
GAACGTACTGAGCGCGATGAGCAACGCCGCAGTAGTGGTGGTGGTGGTCG
TGAGGAAGGGGGTGGTGAAGGTAGTGGCCGCGGTCGGCGTGAGGTGTCCG
AGGCGCAGAGTGGTGGGCGGGGTAGTAGGGGGAGAGATGACAACGGGACG
CTGAAGAAAAGTGCGAGTAGAGGCAAGGGAAGCGGTACCGTGGTGGTTGA
CCGTAAGAACGGGACCAATGAGAAAAATAAGGACACCCCGCAGAGAAGGG
ACATGCCGCAGAGAGAGGACAAGCGGCAGGGCCGCCGCAGAGGTCGTCGT
CGATCGCGCAGCGAGAGTTCCTCTTCTGGGTCATCGTCGGATTCGGGGTC
TTCGTCGGATTCCGGATCGGGTTCGTCTTCGTCTTCGTCGGGTTCGAGCT
CGTCTTCATCGGATTCGGGGTCTTCATCGGATTCTGAGTCTTCGTCTTCA
TCGGATTCCGCTTCCTCTTCGTCCGCGTCACCGTCTCCTGTGCGCTCTTC
GAAAAAGCGCAGCCGCGAGAAGAGGTGAGACGAGCGCGGCGGCAGCCGCG
GCGGGTACCGACGCGGGCAGAGGTACGACGTGCACTCCCGTGACAGAGAT
GAAAGAGAAAGAGACGGGGCGGGGTGCGAGGACTACGGCATTGACGAGGG
CGATTTCCCACCAGTCGGGGTTGTGGAAGAAGAGCGGTGGCAGCCGGAAC
AACTGGAGGATGACGATGAGGGGTTTGGGGGCAACAGGGGAGCAAAGAGG
CACGCTGATGATGACGACGATCGCGCGTCCGCTAAGAAGCAGAAGCCCGT
GCCTCGCAAAGTTACAGTGGTGGCCGCCGAGCAGTATCAGCCGCGTGCGG
CGGCTGGGCGGACGTCGGTCAGAAACGCTGATGACAGAGACTCGTCGCCG
TCACCGTCTCCTCCGCCGTGGTCATCCCGTCGGGATGGCAGTAGAAGGGA
CAGGAGCGTGGACAGCCGAGACAGTCATGGGGATGGAGAGGAGGGGAGGC
GCAAGGTAAGGCATGAGCCGGTGCGCGAAGTGGTCGTCCGTGAGGTCCGC
GACGTCCCTTCTCGCCCTGCTCCTCAGGCTGTGGGCAGAGTCGACGACGG
AGCTAGGACGGCCCCTAAGGGTGATAAAGGCCCCGGTGGCGGGAGGGATC
GTGTGAAAGGTTACGAAGAGGAATCGAGATCGCGGGCTGGGGGCGGCGGC
GAACGTACTGAGCGCGATGAGCAACGCCGCAGTAGTGGTGGTGGTGGTCG
TGAGGAAGGGGGTGGTGAAGGTAGTGGCCGCGGTCGGCGTGAGGTGTCCG
AGGCGCAGAGTGGTGGGCGGGGTAGTAGGGGGAGAGATGACAACGGGACG
CTGAAGAAAAGTGCGAGTAGAGGCAAGGGAAGCGGTACCGTGGTGGTTGA
CCGTAAGAACGGGACCAATGAGAAAAATAAGGACACCCCGCAGAGAAGGG
ACATGCCGCAGAGAGAGGACAAGCGGCAGGGCCGCCGCAGAGGTCGTCGT
CGATCGCGCAGCGAGAGTTCCTCTTCTGGGTCATCGTCGGATTCGGGGTC
TTCGTCGGATTCCGGATCGGGTTCGTCTTCGTCTTCGTCGGGTTCGAGCT
CGTCTTCATCGGATTCGGGGTCTTCATCGGATTCTGAGTCTTCGTCTTCA
TCGGATTCCGCTTCCTCTTCGTCCGCGTCACCGTCTCCTGTGCGCTCTTC
GAAAAAGCGCAGCCGCGAGAAGAGGTGA back to top
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