prot_H-paniculata_contig19897.5081.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig19897.5081.1
Unique Nameprot_H-paniculata_contig19897.5081.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length45
Homology
BLAST of mRNA_H-paniculata_contig19897.5081.1 vs. uniprot
Match: D7FRC0_ECTSI (Radical S-adenosyl methionine domain-containing protein 1, mitochondrial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRC0_ECTSI)

HSP 1 Score: 70.5 bits (171), Expect = 5.170e-13
Identity = 33/43 (76.74%), Postives = 38/43 (88.37%), Query Frame = 0
Query:    1 MGVQSFDADLLRSCGRAHSLQDVYDAVQVMRKAGVENFSIDLM 43
            MGVQSFDA LL +CGRAHSL DVY AV+++RKA V+NFSIDLM
Sbjct:  197 MGVQSFDAGLLEACGRAHSLADVYQAVELLRKAKVDNFSIDLM 239          
BLAST of mRNA_H-paniculata_contig19897.5081.1 vs. uniprot
Match: A0A6H5K982_9PHAE (Radical SAM core domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K982_9PHAE)

HSP 1 Score: 68.9 bits (167), Expect = 1.800e-12
Identity = 32/43 (74.42%), Postives = 37/43 (86.05%), Query Frame = 0
Query:    1 MGVQSFDADLLRSCGRAHSLQDVYDAVQVMRKAGVENFSIDLM 43
            MGVQSFD  LL +CGRAHSL DVY AV+++RKA V+NFSIDLM
Sbjct:  138 MGVQSFDGGLLEACGRAHSLADVYQAVELLRKAKVDNFSIDLM 180          
BLAST of mRNA_H-paniculata_contig19897.5081.1 vs. uniprot
Match: A0A7S0SV04_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SV04_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 8.460e-11
Identity = 26/43 (60.47%), Postives = 36/43 (83.72%), Query Frame = 0
Query:    1 MGVQSFDADLLRSCGRAHSLQDVYDAVQVMRKAGVENFSIDLM 43
            MGVQSFD ++L+SCGRAHSL D+Y+A+  + K+  +NFSIDL+
Sbjct:   24 MGVQSFDENMLKSCGRAHSLSDIYNALDALNKSDFDNFSIDLI 66          
BLAST of mRNA_H-paniculata_contig19897.5081.1 vs. uniprot
Match: A0A7J7NDS4_9MAGN (Radical S-adenosyl methionine domain-containing protein 1, mitochondrial n=1 Tax=Kingdonia uniflora TaxID=39325 RepID=A0A7J7NDS4_9MAGN)

HSP 1 Score: 62.8 bits (151), Expect = 2.670e-10
Identity = 24/43 (55.81%), Postives = 39/43 (90.70%), Query Frame = 0
Query:    1 MGVQSFDADLLRSCGRAHSLQDVYDAVQVMRKAGVENFSIDLM 43
            +GVQ+F  +LLRSCGRAH +++VY+A++++R +GVEN+S+DL+
Sbjct:  274 LGVQAFQEELLRSCGRAHGIEEVYEAIEIIRSSGVENWSMDLI 316          
BLAST of mRNA_H-paniculata_contig19897.5081.1 vs. uniprot
Match: UPI00101720F0 (uncharacterized protein LOC114162341 isoform X2 n=1 Tax=Vigna unguiculata TaxID=3917 RepID=UPI00101720F0)

HSP 1 Score: 60.8 bits (146), Expect = 1.120e-9
Identity = 25/43 (58.14%), Postives = 37/43 (86.05%), Query Frame = 0
Query:    1 MGVQSFDADLLRSCGRAHSLQDVYDAVQVMRKAGVENFSIDLM 43
            +GVQ+F  +LLRSCGRAH +Q+V++A+ V++  GVEN+SIDL+
Sbjct:  185 LGVQAFQEELLRSCGRAHGVQEVHEAISVVKSCGVENWSIDLI 227          
BLAST of mRNA_H-paniculata_contig19897.5081.1 vs. uniprot
Match: UPI001CFBF85F (heme chaperone HemW n=1 Tax=Mangifera indica TaxID=29780 RepID=UPI001CFBF85F)

HSP 1 Score: 60.5 bits (145), Expect = 1.740e-9
Identity = 23/43 (53.49%), Postives = 38/43 (88.37%), Query Frame = 0
Query:    1 MGVQSFDADLLRSCGRAHSLQDVYDAVQVMRKAGVENFSIDLM 43
            +GVQ+F  DLL+SCGRAH +++VY+A+++++  GVEN+S+DL+
Sbjct:  182 LGVQAFQDDLLKSCGRAHGVKEVYEAIEIVKSCGVENWSMDLI 224          
BLAST of mRNA_H-paniculata_contig19897.5081.1 vs. uniprot
Match: A0A2P6P578_ROSCH (Radical S-adenosyl methionine domain-containing protein 1, mitochondrial n=1 Tax=Rosa chinensis TaxID=74649 RepID=A0A2P6P578_ROSCH)

HSP 1 Score: 60.5 bits (145), Expect = 1.740e-9
Identity = 24/43 (55.81%), Postives = 37/43 (86.05%), Query Frame = 0
Query:    1 MGVQSFDADLLRSCGRAHSLQDVYDAVQVMRKAGVENFSIDLM 43
            +GVQ+F  +LL+SCGRAH L++VYDA++++   GVEN+S+DL+
Sbjct:  175 LGVQAFQEELLKSCGRAHGLKEVYDAIEIVGSCGVENWSMDLI 217          
BLAST of mRNA_H-paniculata_contig19897.5081.1 vs. uniprot
Match: A0A2K3L3C1_TRIPR (Radical S-adenosyl methionine domain-containing protein 1, mitochondrial n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3L3C1_TRIPR)

HSP 1 Score: 60.1 bits (144), Expect = 2.340e-9
Identity = 24/43 (55.81%), Postives = 37/43 (86.05%), Query Frame = 0
Query:    1 MGVQSFDADLLRSCGRAHSLQDVYDAVQVMRKAGVENFSIDLM 43
            +GVQ+F   LL+SCGRAH L++V++A+ +++K GVEN+SIDL+
Sbjct:   72 LGVQAFQEKLLKSCGRAHGLEEVHEAIDIVKKCGVENWSIDLI 114          
BLAST of mRNA_H-paniculata_contig19897.5081.1 vs. uniprot
Match: A0A1Z4JC28_LEPBY (Heme chaperone HemW n=2 Tax=Leptolyngbya TaxID=47251 RepID=A0A1Z4JC28_LEPBY)

HSP 1 Score: 60.1 bits (144), Expect = 2.360e-9
Identity = 21/43 (48.84%), Postives = 38/43 (88.37%), Query Frame = 0
Query:    1 MGVQSFDADLLRSCGRAHSLQDVYDAVQVMRKAGVENFSIDLM 43
            +G Q+F +D+L++CGR H+++D+Y +V ++R+AG+ENFS+DL+
Sbjct:  127 LGTQAFQSDILKACGRTHTVEDIYTSVDLIRQAGIENFSLDLI 169          
BLAST of mRNA_H-paniculata_contig19897.5081.1 vs. uniprot
Match: A0A2H5PF74_CITUN (Elongator complex protein 3 n=1 Tax=Citrus unshiu TaxID=55188 RepID=A0A2H5PF74_CITUN)

HSP 1 Score: 60.1 bits (144), Expect = 2.380e-9
Identity = 23/43 (53.49%), Postives = 38/43 (88.37%), Query Frame = 0
Query:    1 MGVQSFDADLLRSCGRAHSLQDVYDAVQVMRKAGVENFSIDLM 43
            +GVQ+F  +LL+SCGRAH L++VY+A+++++  GVEN+S+DL+
Sbjct:  630 LGVQAFQEELLKSCGRAHGLKEVYEAIEIVKLCGVENWSLDLI 672          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig19897.5081.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FRC0_ECTSI5.170e-1376.74Radical S-adenosyl methionine domain-containing pr... [more]
A0A6H5K982_9PHAE1.800e-1274.42Radical SAM core domain-containing protein n=1 Tax... [more]
A0A7S0SV04_9STRA8.460e-1160.47Hypothetical protein (Fragment) n=1 Tax=Chromulina... [more]
A0A7J7NDS4_9MAGN2.670e-1055.81Radical S-adenosyl methionine domain-containing pr... [more]
UPI00101720F01.120e-958.14uncharacterized protein LOC114162341 isoform X2 n=... [more]
UPI001CFBF85F1.740e-953.49heme chaperone HemW n=1 Tax=Mangifera indica TaxID... [more]
A0A2P6P578_ROSCH1.740e-955.81Radical S-adenosyl methionine domain-containing pr... [more]
A0A2K3L3C1_TRIPR2.340e-955.81Radical S-adenosyl methionine domain-containing pr... [more]
A0A1Z4JC28_LEPBY2.360e-948.84Heme chaperone HemW n=2 Tax=Leptolyngbya TaxID=472... [more]
A0A2H5PF74_CITUN2.380e-953.49Elongator complex protein 3 n=1 Tax=Citrus unshiu ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023404Radical SAM, alpha/beta horseshoeGENE3D3.80.30.20coord: 1..44
e-value: 4.4E-13
score: 50.8
NoneNo IPR availablePANTHERPTHR13932:SF16coord: 1..43
NoneNo IPR availableSUPERFAMILY102114Radical SAM enzymescoord: 1..43
IPR034505Anaerobic coproporphyrinogen-III oxidasePANTHERPTHR13932COPROPORPHYRINIGEN III OXIDASEcoord: 1..43

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig19897contigH-paniculata_contig19897:4382..4565 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig19897.5081.1mRNA_H-paniculata_contig19897.5081.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig19897 4331..4613 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig19897.5081.1 ID=prot_H-paniculata_contig19897.5081.1|Name=mRNA_H-paniculata_contig19897.5081.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=45bp
MGVQSFDADLLRSCGRAHSLQDVYDAVQVMRKAGVENFSIDLMR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023404rSAM_horseshoe
IPR034505Coproporphyrinogen-III_oxidase