mRNA_H-paniculata_contig1985.5069.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig1985.5069.1 vs. uniprot
Match: D7FV70_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FV70_ECTSI) HSP 1 Score: 196 bits (497), Expect = 2.280e-61 Identity = 102/116 (87.93%), Postives = 109/116 (93.97%), Query Frame = 1
Query: 1 LREETRIIKMVLSNISIGISSPFSSDLISTTKFRYIKAPRVEMSAEGKAEDAKRRKVQEEDSAFGTYAGAGGKRLVYRERTPAGNYRIIEESVNEEMTREEMLDKRATKKADRHCN 348
LREETRIIKMVLSN+SI ISSPFSSDLISTT FRYIKAPR+E+SAE KAE+ K+RKVQEEDSAFGTYAGAGGKRLVYRERTPAGNYRIIE +V+E MTREEMLD RATKKADRHCN
Sbjct: 107 LREETRIIKMVLSNMSISISSPFSSDLISTTNFRYIKAPRLEVSAETKAEERKKRKVQEEDSAFGTYAGAGGKRLVYRERTPAGNYRIIETTVDEAMTREEMLDMRATKKADRHCN 222
BLAST of mRNA_H-paniculata_contig1985.5069.1 vs. uniprot
Match: A0A835Z5I8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5I8_9STRA) HSP 1 Score: 111 bits (277), Expect = 1.860e-28 Identity = 61/117 (52.14%), Postives = 82/117 (70.09%), Query Frame = 1
Query: 1 LREETRIIKMVLSNISIGISSPFSSDLISTTKFRYIKAPRVEMSAEGKAEDAKRRKVQEEDSAFGTYAGAGGKRLVYRERTPA--GNYRIIEESVNEEMTREEMLDKRATKKADRHC 345
L +ETR+++MVLS+ G+SS FS+DLISTT F+Y+ APR E AE A AKR ++QEED AFGTY+ GG ++VYR + G Y I+ + MTREE+L+ R+ KKADR+C
Sbjct: 75 LAQETRLVRMVLSDAHAGVSSAFSTDLISTTAFQYVSAPRGE--AEDPAVAAKRARLQEEDRAFGTYSSGGGSKVVYRVKKAGVYGGYEIVTADSKKSMTREELLNVRSKKKADRYC 189
BLAST of mRNA_H-paniculata_contig1985.5069.1 vs. uniprot
Match: A0A024UEL5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UEL5_9STRA) HSP 1 Score: 111 bits (277), Expect = 3.170e-28 Identity = 62/120 (51.67%), Postives = 80/120 (66.67%), Query Frame = 1
Query: 1 LREETRIIKMVLSNISIGISSPFSSDLISTTKFRYIKAPRVEMSAEGKAEDAKRRKVQEEDSAFGTYAGA--GGKRLVYRERTPA--GNYRIIEESVNEEMTREEMLDKRATKKADRHCN 348
L+EETRI+KMVLS++S+ ISSPFSSDL+STT F YIKAP E+ + + +K EE SAFGTYAG G YR + G Y II+E+ + +REE+LD R+ +K DRHCN
Sbjct: 92 LKEETRIVKMVLSDVSVSISSPFSSDLVSTTTFWYIKAPPEEVDKDAVESKKRSKKNDEEASAFGTYAGGTTAGTEFTYRVKKAGVYGGYAIIKETADANRSREELLDIRSKRKGDRHCN 211
BLAST of mRNA_H-paniculata_contig1985.5069.1 vs. uniprot
Match: W4H648_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H648_9STRA) HSP 1 Score: 108 bits (269), Expect = 4.910e-27 Identity = 58/120 (48.33%), Postives = 81/120 (67.50%), Query Frame = 1
Query: 1 LREETRIIKMVLSNISIGISSPFSSDLISTTKFRYIKAPRVEMSAEGKAEDAKRRKVQEEDSAFGTYAG--AGGKRLVYRERTPA--GNYRIIEESVNEEMTREEMLDKRATKKADRHCN 348
++EETRI+KMVLS++SI ISSPFSSDL+STT F YIKAP E+ + + +K +EE AFGTYAG + G YR + G Y +++E+ + +RE++LD R+ +K DRHCN
Sbjct: 91 MKEETRIVKMVLSDVSISISSPFSSDLVSTTTFSYIKAPPEEIDQDAIETKKRSKKNEEETFAFGTYAGGTSAGSEFTYRVKKAGAYGGYAVLKETADANRSREDLLDIRSKRKGDRHCN 210
BLAST of mRNA_H-paniculata_contig1985.5069.1 vs. uniprot
Match: A0A6G0XV17_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XV17_9STRA) HSP 1 Score: 108 bits (269), Expect = 5.150e-27 Identity = 62/119 (52.10%), Postives = 78/119 (65.55%), Query Frame = 1
Query: 1 LREETRIIKMVLSNISIGISSPFSSDLISTTKFRYIKAPRVEMSAEGKAEDAKRRKVQEEDSAFGTYAGAG--GKRLVYRERTPA--GNYRIIEESVNEEMTREEMLDKRATKKADRHC 345
L+EETRI+ MVLS++SI ISSPFSSDLISTT F YIKAP E+ + +R+ QEE AFGTYAG G YR + G Y I++E+ + +REE+LD R+ KK DRHC
Sbjct: 93 LKEETRIVTMVLSDVSISISSPFSSDLISTTTFSYIKAPPEEVDKDELETKKRRKNEQEESFAFGTYAGGTTVGTEYTYRVKKSGAYGGYAIVKETADSNRSREELLDIRSKKKGDRHC 211
BLAST of mRNA_H-paniculata_contig1985.5069.1 vs. uniprot
Match: A0A7S3ZK63_9STRA (Hypothetical protein (Fragment) n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZK63_9STRA) HSP 1 Score: 107 bits (266), Expect = 1.450e-26 Identity = 60/108 (55.56%), Postives = 73/108 (67.59%), Query Frame = 1
Query: 1 LREETRIIKMVLSNISIGISSPFSSDLISTTKFRYIKAPRVEMSAEGKAEDAKRRKVQEEDSAFGTYAGAGGKRLVYRERTP-----AGNYRIIEESVNEEMTREEML 309
L EETRI+KMVLS++SI ISS FSSDL+STT FRY+ APRVE SA K DA +R+V ED A G YAG GG LVYR R + ++I+ E + E TR E+L
Sbjct: 105 LTEETRIVKMVLSDVSIAISSAFSSDLVSTTAFRYVAAPRVEQSAADKERDAAQRRVLREDGAVGDYAGGGGTTLVYRTRKKGAVGGSNGWKIVTEKLAEPKTRTELL 212
BLAST of mRNA_H-paniculata_contig1985.5069.1 vs. uniprot
Match: A0A485LKB6_9STRA (Aste57867_21986 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LKB6_9STRA) HSP 1 Score: 107 bits (266), Expect = 1.490e-26 Identity = 60/119 (50.42%), Postives = 78/119 (65.55%), Query Frame = 1
Query: 1 LREETRIIKMVLSNISIGISSPFSSDLISTTKFRYIKAPRVEMSAEGKAEDAKRRKVQEEDSAFGTYAGA--GGKRLVYRERTPA--GNYRIIEESVNEEMTREEMLDKRATKKADRHC 345
L+EETRII MVLS++S+ ISSPFS+DL+STT F YIKAP+ E+ KR+K EE AFGTYAG G YR + G Y I++E+ + +RE++LD R+ KK DRHC
Sbjct: 94 LKEETRIITMVLSDVSVSISSPFSTDLVSTTTFSYIKAPKEEVDVADLENKKKRKKNDEELFAFGTYAGGTTAGTEFTYRVKKAGVYGGYAILKETADSNRSREDLLDIRSKKKGDRHC 212
BLAST of mRNA_H-paniculata_contig1985.5069.1 vs. uniprot
Match: A0A1V9YA44_9STRA (Niemann-Pick C1 protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YA44_9STRA) HSP 1 Score: 105 bits (263), Expect = 4.090e-26 Identity = 62/120 (51.67%), Postives = 78/120 (65.00%), Query Frame = 1
Query: 1 LREETRIIKMVLSNISIGISSPFSSDLISTTKFRYIKAPRVEMSAEGKAEDAKRRKVQEEDSAFGTYAGA--GGKRLVYRERTPA--GNYRIIEESVNEEMTREEMLDKRATKKADRHCN 348
L+EETRI++MVLS++SI ISS FSSDL+STT F YIKAP K K++K EE AFGTYAG G +L YR + G Y II+E+ + +REE+LD R+ K DRHCN
Sbjct: 93 LQEETRIVRMVLSDVSISISSAFSSDLVSTTTFHYIKAPPDXXXXAQKELATKKQKKDEEGFAFGTYAGGTTAGSQLTYRVKKSGVYGGYTIIKETADTSRSREELLDLRSKMKGDRHCN 212
BLAST of mRNA_H-paniculata_contig1985.5069.1 vs. uniprot
Match: M4BTL8_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BTL8_HYAAE) HSP 1 Score: 102 bits (253), Expect = 1.580e-24 Identity = 59/120 (49.17%), Postives = 83/120 (69.17%), Query Frame = 1
Query: 1 LREETRIIKMVLSNISIGISSPFSSDLISTTKFRYIKAPRVEMSAEGKAEDAKRRKVQ-EEDSAFGTYAGAG--GKRLVYRERTPA--GNYRIIEESVNEEMTREEMLDKRATKKADRHC 345
L +ETRI++MVLS++S +SS FSSDL+S+T F YI+AP + EG+ A+ +K + +E++AFGTYAG G +L YR + G Y I++E NEE +RE++LD RA KK DRHC
Sbjct: 101 LVDETRIVRMVLSDVSASVSSAFSSDLVSSTPFYYIRAPPDDKKHEGEELKARLKKHRKDEETAFGTYAGGTEKGGQLTYRVKKSGAYGGYAIVKEDTNEERSREDLLDIRAKKKGDRHC 220
BLAST of mRNA_H-paniculata_contig1985.5069.1 vs. uniprot
Match: A0A067CG03_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CG03_SAPPC) HSP 1 Score: 101 bits (251), Expect = 2.680e-24 Identity = 60/120 (50.00%), Postives = 73/120 (60.83%), Query Frame = 1
Query: 1 LREETRIIKMVLSNISIGISSPFSSDLISTTKFRYIKAPRVEMSAEGKAEDAKRRKVQEEDSAFGTYAGA--GGKRLVYRERTPA--GNYRIIEESVNEEMTREEMLDKRATKKADRHCN 348
L+EETRI+KMVLS++S+ ISS FSSDL+STT F YIKAP E EE AFGTYAG G YR + G Y I++E+ + +REE+LD RA KK DRHCN
Sbjct: 95 LQEETRIVKMVLSDVSVSISSAFSSDLVSTTTFHYIKAPPDEXXXXXXXXXXXXXXSDEEGFAFGTYAGGTTAGSEYTYRVKKSGVYGGYAIMKETADANRSREELLDLRAKKKGDRHCN 214 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1985.5069.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1985.5069.1 >prot_H-paniculata_contig1985.5069.1 ID=prot_H-paniculata_contig1985.5069.1|Name=mRNA_H-paniculata_contig1985.5069.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=108bp MVLSNISIGISSPFSSDLISTTKFRYIKAPRVEMSAEGKAEDAKRRKVQEback to top mRNA from alignment at H-paniculata_contig1985:21339..22404- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig1985.5069.1 ID=mRNA_H-paniculata_contig1985.5069.1|Name=mRNA_H-paniculata_contig1985.5069.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1066bp|location=Sequence derived from alignment at H-paniculata_contig1985:21339..22404- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig1985:21339..22404- >mRNA_H-paniculata_contig1985.5069.1 ID=mRNA_H-paniculata_contig1985.5069.1|Name=mRNA_H-paniculata_contig1985.5069.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=648bp|location=Sequence derived from alignment at H-paniculata_contig1985:21339..22404- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |