prot_H-paniculata_contig19845.5065.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig19845.5065.1
Unique Nameprot_H-paniculata_contig19845.5065.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length92
Homology
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BLAST of mRNA_H-paniculata_contig19845.5065.1 vs. uniprot
Match: A0A6H5K3G1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3G1_9PHAE)

HSP 1 Score: 90.5 bits (223), Expect = 1.360e-19
Identity = 48/88 (54.55%), Postives = 55/88 (62.50%), Query Frame = 0 
Query:    5 WGPGGRILWKGLCTSFFMLTRPCEMFAESGNLVHPTYCLRRSGVAFYQGQAQLRRKAWGSADRVEVRFRRAKGDQFRSGAVVTCVRTG 92
            WG  GR+L+  L  SFF L R CEMFA S   +   + LRR  VAF+ G  QL  +  G ADRVEVRFR +KGDQFR GAV T  R G
Sbjct:  178 WGTRGRVLFLALSASFFFLMRACEMFAVSSLAMDSCHGLRRGDVAFFLGSRQLPPERRGEADRVEVRFRSSKGDQFRKGAVCTRARPG 265
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig19845.5065.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K3G1_9PHAE1.360e-1954.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig19845contigH-paniculata_contig19845:4220..4495 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig19845.5065.1mRNA_H-paniculata_contig19845.5065.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig19845 4220..4495 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig19845.5065.1 ID=prot_H-paniculata_contig19845.5065.1|Name=mRNA_H-paniculata_contig19845.5065.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=92bp
LSFGWGPGGRILWKGLCTSFFMLTRPCEMFAESGNLVHPTYCLRRSGVAF
YQGQAQLRRKAWGSADRVEVRFRRAKGDQFRSGAVVTCVRTG
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