mRNA_H-paniculata_contig19844.5064.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig19844.5064.1 vs. uniprot
Match: D8LU90_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LU90_ECTSI) HSP 1 Score: 216 bits (550), Expect = 1.870e-65 Identity = 97/152 (63.82%), Postives = 118/152 (77.63%), Query Frame = 1
Query: 1 MAGQ-GPVTRVASGCTAEEENDLRAIMAKQPERFRVHFTPDYSRDVTTGEQFLFYNKPNGMAHFLKFADPPVNKAVIALVDPDMVFVSKLTPYVGNQKNMIWHDAESERGPDWVVEGQPVAQYYGLGGIWAAWTNLKDITAKLGPNSPANEV 453
M GQ G VTRVASGCT +E +L M +QPERF VHFTPDYS D TGE+F+FYNKPNGMAH+LK AD PV++AV+ALVDPDM+F+S LTP+VG+ M+WHD ++ GPDWV EG PV QYYGLGG+W W +L++IT LG +SPA V
Sbjct: 108 MVGQKGRVTRVASGCTRDERLELEVFMMRQPERFHVHFTPDYSFDPETGERFMFYNKPNGMAHYLKSADYPVHEAVVALVDPDMIFMSPLTPFVGDADKMLWHDGDAGEGPDWVEEGSPVGQYYGLGGVWTTWDDLREITENLGEDSPARAV 259
BLAST of mRNA_H-paniculata_contig19844.5064.1 vs. uniprot
Match: A0A835ZI64_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZI64_9STRA) HSP 1 Score: 118 bits (295), Expect = 2.120e-28 Identity = 55/137 (40.15%), Postives = 81/137 (59.12%), Query Frame = 1
Query: 10 QGPVTRVASGCTAEEENDLRAIMAKQPERFRVHFTPDYSRDVTTGEQFLFYNKPNGMAHFLKFADPPVNKAVIALVDPDMVFVSKLTPYVGNQKNMIWHDAESE-----RGPDWVVEGQPVAQYYGLGGIWAAWTNL 405
+GP+TR+A GC+ E++ ++ + P RVHFTPDYS +TG ++ +YNKP GM HFL A+PP+ ++A++DPD VF+ LTP++ + I D + G + EG P +Q YGLG W W L
Sbjct: 73 KGPITRLAGGCSPEKQTEILKLHQHMPPHHRVHFTPDYSVISSTGHRYPYYNKPFGMQHFLATANPPITNTIVAVLDPDQVFMKPLTPFL-DPDTTILADRNTMPPLRFNGMPVITEGYPASQRYGLGSEWRRWDGL 208
BLAST of mRNA_H-paniculata_contig19844.5064.1 vs. uniprot
Match: W7T637_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T637_9STRA) HSP 1 Score: 107 bits (266), Expect = 3.240e-24 Identity = 58/149 (38.93%), Postives = 92/149 (61.74%), Query Frame = 1
Query: 13 GPVTRVASGCTAEEENDLRAIMAKQPERFRVHFTPDYSRDVTTGEQFLFYNKPNGMAHFLKFADPPVNK-AVIALVDPDMVFVSKLTPYVGNQKNMIWHDAESERGP-DWVVEGQPVAQYYGLGGIWAAWTNLKDITAKLGPNSPANEV 453
G + R+ASGC+ E+ +++ + P RF+VHFTP++ +D +G+ + FYNKP G+ H+L P +K A++AL+DPD +F+ LT Y Q +++ ++ D V EG PVAQYYG+G + WT K + G +SPA++V
Sbjct: 120 GTIVRIASGCSEAEKKEVQKLYDTFPVRFQVHFTPNFKKDAKSGKSYDFYNKPYGLQHWLDSKAAPKHKDAIVALLDPDFLFMRPLT-YKVKQDRVLYSPPVTDGDLIDEVREGHPVAQYYGIG---SQWTKFK-VEYIAGKDSPASKV 263
BLAST of mRNA_H-paniculata_contig19844.5064.1 vs. uniprot
Match: A0A7S3HPB4_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HPB4_9STRA) HSP 1 Score: 104 bits (260), Expect = 2.370e-23 Identity = 60/160 (37.50%), Postives = 89/160 (55.62%), Query Frame = 1
Query: 1 MAGQ-GPVTRVASGCTAEEENDLRAIMAKQPERFRVHFTPDYSRDVTTGEQFLFYNKPNGMAHFLKFADPPVN-KAVIALVDPDMVFVSKLTPYVGNQKNMIW-HDAESERGPDWVVEGQPVAQYYGLGGIWAAWTNLKDITAKL-GPNSPANEVRAYVG 468
+ GQ G +TR+ASGC A ++ +L A+ K ++ HFTPD+ D T +++ FYNKP GM H+L+ A P + +IAL+DPDM+FV L P + +++ + E D + G PV+Q YGLG W + K K+ G SP +V G
Sbjct: 112 VVGQKGRITRIASGCDATQQAELTALYKKLYPKYGAHFTPDFKNDAKTNKKYDFYNKPWGMKHWLENAVPAIPPNTIIALLDPDMIFVRPLGPQIRGDISLLTDRGIKDEEIVDVIGLGHPVSQTYGLGAPWTNDNHKKFNRGKICGEGSPCLQVNMRYG 271
BLAST of mRNA_H-paniculata_contig19844.5064.1 vs. uniprot
Match: A0A482SH38_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SH38_9ARCH) HSP 1 Score: 98.2 bits (243), Expect = 5.050e-22 Identity = 52/130 (40.00%), Postives = 78/130 (60.00%), Query Frame = 1
Query: 13 GPVTRVASGCTAEEENDLRAIMAK-QPERFRVHFTPDYSRDVTTGEQFLFYNKPNGMAHFLKFADPPVNK-AVIALVDPDMVFVSKLTPYVGNQKNMIWHDAESERGPDWVVEGQPVAQYYGLGGIWAAW 396
G +TR+ASGC ++ L + + VHFTPD+ +D + + FYNKP G+ H+L++A+PP+ + A+IAL+DPDMVF+ LTP V ++ + V EG+PV+Q YGLG + AW
Sbjct: 135 GIITRIASGCDQAQQEHLTTLYKTLYGDYCTVHFTPDFKKDAQSQRSYDFYNKPWGIKHWLEYANPPIPEDAIIALLDPDMVFLRPLTPVVAGSPYIVRRKFPMTEMIEEVGEGRPVSQTYGLG-MCMAW 263
BLAST of mRNA_H-paniculata_contig19844.5064.1 vs. uniprot
Match: A0A7R9U6U9_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U6U9_9STRA) HSP 1 Score: 90.5 bits (223), Expect = 3.290e-18 Identity = 49/133 (36.84%), Postives = 75/133 (56.39%), Query Frame = 1
Query: 10 QGPVTRVASGCTAEEENDLRAIMAK-QPERFRVHFTPDYSRDVTTGEQFLFYNKPNGMAHFLKFADPPVNKAVIALVDPDMVFVSKLTPYVGNQKNMI------WHDAESERGPDWVVEGQPVAQYYGLGGIW 387
+GPVTR+ASGCT EE+ LR RVHF D S+ + G + ++NKP+G+ H+L++ + VIAL+DPDM+ + ++ +K+ I W ++ + P +V+G P AQ YGLG W
Sbjct: 133 KGPVTRIASGCTPEEQEALRTRYDTFDLAGLRVHFA-DASKKMADGRVYKYFNKPSGLKHWLEYDERLEGNEVIALLDPDMILMKPFPAHMDPEKDFIRTHVPYW---DASKAPKRIVDGTPAAQNYGLGSKW 261
BLAST of mRNA_H-paniculata_contig19844.5064.1 vs. uniprot
Match: F0YDA7_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YDA7_AURAN) HSP 1 Score: 89.0 bits (219), Expect = 8.730e-18 Identity = 62/145 (42.76%), Postives = 81/145 (55.86%), Query Frame = 1
Query: 1 MAGQ-GPVTRVASGCTAEEENDLRAIMAKQPE---RFRVHFTPDYSRDVTTGEQFLFYNKPNGM--------AHFLKFADPPVNKAVIALVDPDMVFVSKLTPYVGNQKNMIWH---DAESERGP-DWVVEGQPVAQYYGLGGIW 387
+AGQ G VTR+ASGCT E LRA A +P+ RF VH TP +S D +G+ + FYNKP G+ H+L AD + AV+AL+DPD +F+ LT V N ++ DA + V GQPV Q+YGLG W
Sbjct: 54 LAGQPGRVTRIASGCTDAEAAKLRARHA-EPDLAGRFLVHLTPHFSTDGDSGKDYKFYNKPYGLRHWLGAGKGHWLARADLG-DDAVVALIDPDFIFLRPLTADVSNASAILASAPVDAAAAAARFRRVKRGQPVGQFYGLGDGW 196
BLAST of mRNA_H-paniculata_contig19844.5064.1 vs. uniprot
Match: B7G3R2_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G3R2_PHATC) HSP 1 Score: 89.0 bits (219), Expect = 9.910e-18 Identity = 61/166 (36.75%), Postives = 89/166 (53.61%), Query Frame = 1
Query: 13 GPVTRVASGCTAEEENDLRA-----IMAKQPERFRVHFTPDYSRDVTTGEQFLFYNKPNGMAHFLK----FADPPVNK-AVIALVDPDMVFVSKLTPYVGNQ-KNMIW-HDAESERGPDWVVEGQPVAQYYGLGGIWAAWTNLKDITAKLGPNSPANEVRAYVGCM 474
G VTRV SGC E++ L++ I+ PERFR+HFTPD+SR V G + ++NKP G H+L+ F D P+++ +++ L+DPD + L P+ N N W A+S V G P+ Q YG G W + DIT +PANE+ + + M
Sbjct: 122 GIVTRVVSGCNPEDQATLQSFFDSMILPMAPERFRIHFTPDFSR-VKPGTNYKYFNKPFGTKHWLESALGFPDNPIDEDSIVILMDPDQLI---LRPFRDNDFSNSRWMFMAKSSTPRTRVAHGAPMGQLYGFG---LQWKDKVDITKV----APANELPSPIETM 276
BLAST of mRNA_H-paniculata_contig19844.5064.1 vs. uniprot
Match: A0A1Z5J689_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J689_FISSO) HSP 1 Score: 88.6 bits (218), Expect = 1.460e-17 Identity = 56/156 (35.90%), Postives = 81/156 (51.92%), Query Frame = 1
Query: 13 GPVTRVASGCTAEEENDLRAIMAKQ-----PERFRVHFTPDYSRDVTTGEQFLFYNKPNGMAHFLKFA-----DPPVNKAVIALVDPDMVFVSKLTPYVGNQ-KNMIWHDAESERGPDWVVE-GQPVAQYYGLGGIWAAWTNLKDITAKLGPNSPA 444
G VTR+ SGC EEE+ L+A+ Q PERF++HFTPDYS +F+++NKP GM H+L+ A +P +++ L+DPD + L P+ N N W + P +E G P+ Q YG W D+T + PN P+
Sbjct: 122 GTVTRIVSGCNEEEESTLQALFDLQIKPMAPERFKIHFTPDYSNVKGGKTKFVYFNKPFGMRHWLQTALGFPYNPIDEDSIVVLMDPDQLI---LRPFRDNDFTNTQWKFVPPNQKPRTKIEHGYPMGQLYGFA---LQWKQKIDMTL-VSPNEPS 270
BLAST of mRNA_H-paniculata_contig19844.5064.1 vs. uniprot
Match: A0A7S3Q7Y1_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q7Y1_9STRA) HSP 1 Score: 87.0 bits (214), Expect = 5.300e-17 Identity = 57/158 (36.08%), Postives = 84/158 (53.16%), Query Frame = 1
Query: 13 GPVTRVASGCTAEEENDLRAIMAKQPER----FRVHFTPDYSR-----DVTTGEQFLFYNKPNGMAHFLKFADPPV-NKAVIALVDPDMVFVSKLTPYVGNQKNMIWHDAESERGPDWVVEGQPVAQYYGLGGIWAAWTNLKDITAKLGPN-SPANEV 453
G VTR+ASGCT EE+ RA ++ ++ F+VHFTP +S+ + GE + F+NKP G+ H+++ A+ + + ++ L+DPD V +T NQ + + V G P AQ +G G A+W NL DI A G N SPA V
Sbjct: 116 GTVTRIASGCTKEEQEAERAFQSQISDQMSSNFKVHFTPQFSKVKGEGEEGDGETYKFFNKPFGLLHWIEHAEVKIKDDDIVILLDPDQVLTRPITNDFSNQSE---NTLVGQNPKTIVTHGSPFAQEFGFG---ASWRNL-DIDAVTGTNDSPAKSV 266 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig19844.5064.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 23
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig19844.5064.1 >prot_H-paniculata_contig19844.5064.1 ID=prot_H-paniculata_contig19844.5064.1|Name=mRNA_H-paniculata_contig19844.5064.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=159bp MAGQGPVTRVASGCTAEEENDLRAIMAKQPERFRVHFTPDYSRDVTTGEQback to top mRNA from alignment at H-paniculata_contig19844:439..2968+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig19844.5064.1 ID=mRNA_H-paniculata_contig19844.5064.1|Name=mRNA_H-paniculata_contig19844.5064.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2530bp|location=Sequence derived from alignment at H-paniculata_contig19844:439..2968+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig19844:439..2968+ >mRNA_H-paniculata_contig19844.5064.1 ID=mRNA_H-paniculata_contig19844.5064.1|Name=mRNA_H-paniculata_contig19844.5064.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=954bp|location=Sequence derived from alignment at H-paniculata_contig19844:439..2968+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |