mRNA_H-paniculata_contig19841.5063.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig19841.5063.1
Unique NamemRNA_H-paniculata_contig19841.5063.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig19841.5063.1 vs. uniprot
Match: A0A6H5K560_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K560_9PHAE)

HSP 1 Score: 335 bits (858), Expect = 6.870e-114
Identity = 171/187 (91.44%), Postives = 181/187 (96.79%), Query Frame = 1
Query:    1 EACRTDIAENRRLNYHLYQALRKSVYKPAAFYKGMLLPLASAGDCTLREASIFASVLARVTIPANHSAVALLKLAQLPYNGASSLFIRVLLNKKYALPYKVIDALVDHFMTFTTETRLLPVLWHQSLLVFAQRYREDVTRLDKDRLKELLKTQQHHQITPEVRRQLFMGGCRGDPKTLSVASTPRST 561
            EACRTDI ENRRLNYHLY+ALRKSVYKPAAFYKGMLLPLASAGDCTLREA+IFASVL+RVTIPANHSAVALLKLAQLPYNGA+SLFIRVLLNKKYALPYKVID+LVDHFMTFTTETR+LPVLWHQSLLVFAQRYR D+TR DK+RLKELLK QQHHQITPEVRRQLFMGGCRG+PK  S+ASTPRST
Sbjct:  109 EACRTDILENRRLNYHLYEALRKSVYKPAAFYKGMLLPLASAGDCTLREAAIFASVLSRVTIPANHSAVALLKLAQLPYNGATSLFIRVLLNKKYALPYKVIDSLVDHFMTFTTETRVLPVLWHQSLLVFAQRYRGDITRADKNRLKELLKAQQHHQITPEVRRQLFMGGCRGEPKG-SLASTPRST 294          
BLAST of mRNA_H-paniculata_contig19841.5063.1 vs. uniprot
Match: D7FWC2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWC2_ECTSI)

HSP 1 Score: 334 bits (857), Expect = 3.890e-112
Identity = 171/187 (91.44%), Postives = 180/187 (96.26%), Query Frame = 1
Query:    1 EACRTDIAENRRLNYHLYQALRKSVYKPAAFYKGMLLPLASAGDCTLREASIFASVLARVTIPANHSAVALLKLAQLPYNGASSLFIRVLLNKKYALPYKVIDALVDHFMTFTTETRLLPVLWHQSLLVFAQRYREDVTRLDKDRLKELLKTQQHHQITPEVRRQLFMGGCRGDPKTLSVASTPRST 561
            EACRTDI ENRRLNYHLY+ALRKSVYKPAAFYKGMLLPLASAGDCTLREA+IFASVL+RVTIPANHSAVALLKLAQLPYNGA+SLFIRVLLNKKYALPYKVID+LVDHFMTFTTETR+LPVLWHQSLLVFAQRYR D+TR DKDRLKELLK QQHHQITPEVRRQLFMG CRG+PK  S+ASTPRST
Sbjct:  221 EACRTDILENRRLNYHLYEALRKSVYKPAAFYKGMLLPLASAGDCTLREAAIFASVLSRVTIPANHSAVALLKLAQLPYNGATSLFIRVLLNKKYALPYKVIDSLVDHFMTFTTETRVLPVLWHQSLLVFAQRYRGDITRADKDRLKELLKAQQHHQITPEVRRQLFMGSCRGEPKG-SLASTPRST 406          
BLAST of mRNA_H-paniculata_contig19841.5063.1 vs. uniprot
Match: A0A835ZE25_9STRA (Bystin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE25_9STRA)

HSP 1 Score: 249 bits (637), Expect = 3.950e-78
Identity = 124/187 (66.31%), Postives = 155/187 (82.89%), Query Frame = 1
Query:    1 EACRTDIAENRRLNYHLYQALRKSVYKPAAFYKGMLLPLASAGDCTLREASIFASVLARVTIPANHSAVALLKLAQLPYNGASSLFIRVLLNKKYALPYKVIDALVDHFMTFTTETRLLPVLWHQSLLVFAQRYREDVTRLDKDRLKELLKTQQHHQITPEVRRQLFMGGCRGDPKTLSVASTPRST 561
            E CR+D+A+N+RLNYHLY+AL+KSVYKPAAF+KG+LLPLA++G+CTLREA+IF SVL++V+IPANH+AVALLKLA++PY+GA+S+F+RVLLNKKYALP++VI ALVDHF  F  ETR LPVLWHQSLL F QRYR D+T  DK+R+KELL+ Q H  IT EVRR+LF    R D    +     R+T
Sbjct:  281 ERCRSDMADNKRLNYHLYEALKKSVYKPAAFFKGILLPLAASGNCTLREATIFGSVLSKVSIPANHAAVALLKLAEMPYSGATSMFVRVLLNKKYALPHRVIAALVDHFSRFVGETRELPVLWHQSLLAFVQRYRGDITARDKERIKELLRAQPHRLITDEVRRELFGAAARADLALAAFKQRGRAT 467          
BLAST of mRNA_H-paniculata_contig19841.5063.1 vs. uniprot
Match: A0A7S2CAR2_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CAR2_9STRA)

HSP 1 Score: 221 bits (563), Expect = 5.700e-70
Identity = 117/174 (67.24%), Postives = 140/174 (80.46%), Query Frame = 1
Query:    1 EACRTDIAENRRLNYHLYQALRKSVYKPAAFYKGMLLPLASAGDCTLREASIFASVLARVTIPANHSAVALLKLAQLPYNGASSLFIRVLLNKKYALPYKVIDALVDHFMTFTTETRLLPVLWHQSLLVFAQRYREDVTRLDKDRLKELLKTQQHHQITPEVRRQLFMGGCRGD 522
            E  + DI EN RLNYHLY A++K+VYKPAAF+KGM+LP+A  G C+L+EA+I ASVLA+V+IPANHSAVALLKLA++PY G +SLFIRVLLNKKYALP++VIDALVDHF        L PVLWHQSLLVFAQRY+ DV+   K+RLK L K Q HHQITPE+RR+LF    R +
Sbjct:   56 ERVKLDIEENGRLNYHLYMAVKKAVYKPAAFFKGMVLPMAQTG-CSLKEATIMASVLAKVSIPANHSAVALLKLAEMPYAGPTSLFIRVLLNKKYALPHRVIDALVDHFCDLGDGPEL-PVLWHQSLLVFAQRYKADVSLEQKERLKTLFKAQFHHQITPEIRRELFSTASRAE 227          
BLAST of mRNA_H-paniculata_contig19841.5063.1 vs. uniprot
Match: A0A6V1WMU3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1WMU3_HETAK)

HSP 1 Score: 218 bits (556), Expect = 2.620e-66
Identity = 111/174 (63.79%), Postives = 135/174 (77.59%), Query Frame = 1
Query:    1 EACRTDIAENRRLNYHLYQALRKSVYKPAAFYKGMLLPLASAGDCTLREASIFASVLARVTIPANHSAVALLKLAQLPYNGASSLFIRVLLNKKYALPYKVIDALVDHFMTFTTETRLLPVLWHQSLLVFAQRYREDVTRLDKDRLKELLKTQQHHQITPEVRRQLFMGGCRGD 522
            E  R DI +N++LNYHLY AL K+ YKPAAFYKG+LLPLA  GDCTL+EA+I  SVL +  IP NHSAVALLKLAQ  Y+GA+SLFI++LLNKKY LPY+V+DAL  HF+ F +++R LPVLWHQSLL FAQRY+  +TR  K+ LK LLK   H  ITPEVRR+L+    RG+
Sbjct:  262 EKVRDDIRQNKKLNYHLYNALLKACYKPAAFYKGILLPLARGGDCTLQEATIVGSVLTKKAIPVNHSAVALLKLAQGKYSGAASLFIKLLLNKKYCLPYRVVDALCAHFLAFASDSRELPVLWHQSLLTFAQRYKHHLTREQKEALKPLLKAHFHRLITPEVRRELYSSRSRGE 435          
BLAST of mRNA_H-paniculata_contig19841.5063.1 vs. uniprot
Match: L8GEG0_ACACA (Bystin, putative (Fragment) n=2 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GEG0_ACACA)

HSP 1 Score: 212 bits (540), Expect = 4.300e-65
Identity = 105/171 (61.40%), Postives = 141/171 (82.46%), Query Frame = 1
Query:   10 RTDIAENRRLNYHLYQALRKSVYKPAAFYKGMLLPLASAGDCTLREASIFASVLARVTIPANHSAVALLKLAQLPYNGASSLFIRVLLNKKYALPYKVIDALVDHFMTFTTETRLLPVLWHQSLLVFAQRYREDVTRLDKDRLKELLKTQQHHQITPEVRRQLFMGGCRGD 522
            R D+ +N++LN+HLY AL+KSV+KPAAFYKG++LPL  + +CTLREA+I AS++ +V+IPA  SAVALLK+AQ+ Y+GA+S+FIRVLL+KKY+LPY+VIDALVDHF+ F  E R+LPVLWHQ+LLVF QRY+ED+T   K ++K+L+K Q HH IT E+ R+L     RG+
Sbjct:  169 RNDMEQNKKLNWHLYMALKKSVFKPAAFYKGIVLPLCESRNCTLREATIVASIIVKVSIPALQSAVALLKIAQMEYSGANSIFIRVLLDKKYSLPYRVIDALVDHFVGFIKEERMLPVLWHQALLVFVQRYKEDMTPNQKAQVKQLIKHQGHHTITGEILRELNESKSRGE 339          
BLAST of mRNA_H-paniculata_contig19841.5063.1 vs. uniprot
Match: A0A059LII7_9CHLO (Bystin n=1 Tax=Helicosporidium sp. ATCC 50920 TaxID=1291522 RepID=A0A059LII7_9CHLO)

HSP 1 Score: 209 bits (533), Expect = 6.930e-65
Identity = 103/180 (57.22%), Postives = 140/180 (77.78%), Query Frame = 1
Query:    4 ACRTDIAENRRLNYHLYQALRKSVYKPAAFYKGMLLPLASAGDCTLREASIFASVLARVTIPANHSAVALLKLAQLPYNGASSLFIRVLLNKKYALPYKVIDALVDHFMTFTTETRLLPVLWHQSLLVFAQRYREDVTRLDKDRLKELLKTQQHHQITPEVRRQLFMGGCRGDPKTLSVA 543
            A R DIAEN+RL++ L+QAL+K+ YKPAAF+KG+LLPL ++G+C+LREA I +SVL R ++P  HSA ALL+LA++PY+G +S FIRVLL+K+YALPY+V+DALVDHF+ F ++ R LPV+WHQ+LL F QRY+ ++   D+  L  LL+TQ HH +TPE+RR+L  G  RG      VA
Sbjct:   77 AVRNDIAENKRLHFALFQALKKATYKPAAFFKGILLPLCASGNCSLREAVIISSVLKRCSLPVLHSAAALLRLAEMPYSGTTSFFIRVLLDKRYALPYRVVDALVDHFVRFRSDERALPVVWHQALLCFVQRYKNEIREEDRAELHGLLRTQFHHLVTPEIRRELEAGVARGVQAPAPVA 256          
BLAST of mRNA_H-paniculata_contig19841.5063.1 vs. uniprot
Match: V4B1L4_LOTGI (Uncharacterized protein n=1 Tax=Lottia gigantea TaxID=225164 RepID=V4B1L4_LOTGI)

HSP 1 Score: 213 bits (542), Expect = 1.150e-64
Identity = 102/169 (60.36%), Postives = 135/169 (79.88%), Query Frame = 1
Query:   10 RTDIAENRRLNYHLYQALRKSVYKPAAFYKGMLLPLASAGDCTLREASIFASVLARVTIPANHSAVALLKLAQLPYNGASSLFIRVLLNKKYALPYKVIDALVDHFMTFTTETRLLPVLWHQSLLVFAQRYREDVTRLDKDRLKELLKTQQHHQITPEVRRQLFMGGCR 516
            R DIAE  RLN+HLY A+RKS++KPAAF+KG+LLPL  AGDCTLREA I +S+LA+ +IP  HSA A+LK+A++ YNGA+S+F+R L +KKYALPY+V+DA+V H++ F ++ R LPVLWHQSLL F QRY+ED++   K+ L ELL+   HHQIT E+RR+L +  CR
Sbjct:  226 RDDIAEYNRLNFHLYLAIRKSLFKPAAFFKGVLLPLCEAGDCTLREAIIMSSILAKCSIPMLHSAAAILKIAEMNYNGANSIFLRTLFDKKYALPYRVVDAVVHHYLGFRSDKRELPVLWHQSLLTFVQRYKEDISTEQKEALMELLRLHTHHQITDEIRRELLLSKCR 394          
BLAST of mRNA_H-paniculata_contig19841.5063.1 vs. uniprot
Match: A0A507F3D9_9FUNG (Uncharacterized protein n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A507F3D9_9FUNG)

HSP 1 Score: 213 bits (542), Expect = 2.300e-64
Identity = 105/171 (61.40%), Postives = 137/171 (80.12%), Query Frame = 1
Query:   10 RTDIAENRRLNYHLYQALRKSVYKPAAFYKGMLLPLASAGDCTLREASIFASVLARVTIPANHSAVALLKLAQLPYNGASSLFIRVLLNKKYALPYKVIDALVDHFMTFTTETRLLPVLWHQSLLVFAQRYREDVTRLDKDRLKELLKTQQHHQITPEVRRQLFMGGCRGD 522
            R DI E ++LNYHLY AL+KS+YKPAAF+KG+LLPL   G CTLREA+I  SV+++V+IP  HSA  LLKLA++ Y+GA+SLFIR+LL+KKYALP+KV+DALV HF+ F  + R LPVLWHQSLLVFAQRY+ED+T   K+ L +L++ + H  I+PE+RR+L    CRG+
Sbjct:  254 RDDIQETKKLNYHLYMALKKSLYKPAAFFKGLLLPLCETGTCTLREAAIIGSVISKVSIPVLHSAAGLLKLAEMDYSGANSLFIRILLDKKYALPFKVVDALVFHFIRFKNDPRELPVLWHQSLLVFAQRYKEDMTPEQKEALLDLIRYKVHEGISPEIRRELQNSECRGE 424          
BLAST of mRNA_H-paniculata_contig19841.5063.1 vs. uniprot
Match: A0A507DUN4_9FUNG (Uncharacterized protein n=1 Tax=Powellomyces hirtus TaxID=109895 RepID=A0A507DUN4_9FUNG)

HSP 1 Score: 213 bits (543), Expect = 2.730e-64
Identity = 106/171 (61.99%), Postives = 137/171 (80.12%), Query Frame = 1
Query:   10 RTDIAENRRLNYHLYQALRKSVYKPAAFYKGMLLPLASAGDCTLREASIFASVLARVTIPANHSAVALLKLAQLPYNGASSLFIRVLLNKKYALPYKVIDALVDHFMTFTTETRLLPVLWHQSLLVFAQRYREDVTRLDKDRLKELLKTQQHHQITPEVRRQLFMGGCRGD 522
            R DIAE ++LNYHLY +L+K++YKPAAF+KG+LLPL  +G CTLREA+I  SV+++ +IP  HSA  LLKLA++ Y+GA+SLFIRVLL+KKYALP+KV+DALV HFM F  + R +PVLWHQ+LLVFAQRY+ED+T   KD L +LL+ + H  ITPEVRR+L    CR +
Sbjct:  275 RDDIAETKKLNYHLYLSLKKALYKPAAFFKGLLLPLCESGTCTLREAAIVGSVISKTSIPVLHSAAGLLKLAEMEYSGANSLFIRVLLDKKYALPFKVVDALVLHFMRFKNDRREMPVLWHQALLVFAQRYKEDMTPEQKDALMDLLRHKTHEGITPEVRRELVGSACRDE 445          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig19841.5063.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K560_9PHAE6.870e-11491.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FWC2_ECTSI3.890e-11291.44Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZE25_9STRA3.950e-7866.31Bystin n=1 Tax=Tribonema minus TaxID=303371 RepID=... [more]
A0A7S2CAR2_9STRA5.700e-7067.24Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A6V1WMU3_HETAK2.620e-6663.79Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
L8GEG0_ACACA4.300e-6561.40Bystin, putative (Fragment) n=2 Tax=Acanthamoeba c... [more]
A0A059LII7_9CHLO6.930e-6557.22Bystin n=1 Tax=Helicosporidium sp. ATCC 50920 TaxI... [more]
V4B1L4_LOTGI1.150e-6460.36Uncharacterized protein n=1 Tax=Lottia gigantea Ta... [more]
A0A507F3D9_9FUNG2.300e-6461.40Uncharacterized protein n=2 Tax=Spizellomyces TaxI... [more]
A0A507DUN4_9FUNG2.730e-6461.99Uncharacterized protein n=1 Tax=Powellomyces hirtu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig19841contigH-paniculata_contig19841:1827..4594 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score336.7
Seed ortholog evalue7.2e-90
Seed eggNOG ortholog2880.D7FWC2
Preferred nameBYSL
KEGG rclassRC00002,RC00017
KEGG koko:K00901,ko:K05038,ko:K14797
KEGG TC2.A.22.2
KEGG ReactionR02240
KEGG Pathwayko00561,ko00564,ko01100,ko01110,ko04070,ko04072,ko05231,map00561,map00564,map01100,map01110,map04070,map04072,map05231
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000462,GO:0001701,GO:0001824,GO:0001825,GO:0001829,GO:0002237,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0005829,GO:0005856,GO:0005874,GO:0005881,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0007155,GO:0007275,GO:0007399,GO:0007417,GO:0007420,GO:0007565,GO:0008150,GO:0008152,GO:0008283,GO:0009605,GO:0009607,GO:0009617,GO:0009653,GO:0009790,GO:0009792,GO:0009987,GO:0010033,GO:0010467,GO:0014070,GO:0015630,GO:0016070,GO:0016072,GO:0022414,GO:0022610,GO:0022613,GO:0030154,GO:0030490,GO:0031974,GO:0031981,GO:0032496,GO:0032501,GO:0032502,GO:0033993,GO:0034097,GO:0034470,GO:0034641,GO:0034660,GO:0042221,GO:0042254,GO:0042274,GO:0042995,GO:0043009,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044085,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044430,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0044706,GO:0045177,GO:0046483,GO:0048471,GO:0048513,GO:0048646,GO:0048731,GO:0048856,GO:0048869,GO:0050896,GO:0051704,GO:0051707,GO:0051716,GO:0060322,GO:0070013,GO:0070555,GO:0070848,GO:0070887,GO:0071216,GO:0071219,GO:0071222,GO:0071310,GO:0071345,GO:0071347,GO:0071363,GO:0071396,GO:0071407,GO:0071704,GO:0071840,GO:0090304,GO:0099080,GO:0099081,GO:0099512,GO:0099513,GO:1901360,GO:1901700,GO:1901701
EggNOG free text desc.ribosome biogenesis
EggNOG OGsKOG3871@1,KOG3871@2759
Ec32 ortholog descriptionBystin
Ec32 orthologEc-25_000450.1
EC2.7.1.107
COG Functional cat.P
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko02000,ko03009
Exons4
Model size561
Cds size561
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig19841.5063.1prot_H-paniculata_contig19841.5063.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig19841 1827..4594 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929499.4839098-CDS-H-paniculata_contig19841:1826..19431622929499.4839098-CDS-H-paniculata_contig19841:1826..1943Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig19841 1827..1943 -
1691480887.635889-CDS-H-paniculata_contig19841:1826..19431691480887.635889-CDS-H-paniculata_contig19841:1826..1943Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig19841 1827..1943 -
1622929499.5008812-CDS-H-paniculata_contig19841:3184..33281622929499.5008812-CDS-H-paniculata_contig19841:3184..3328Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig19841 3185..3328 -
1691480887.6474764-CDS-H-paniculata_contig19841:3184..33281691480887.6474764-CDS-H-paniculata_contig19841:3184..3328Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig19841 3185..3328 -
1622929499.5137131-CDS-H-paniculata_contig19841:3723..38461622929499.5137131-CDS-H-paniculata_contig19841:3723..3846Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig19841 3724..3846 -
1691480887.6564114-CDS-H-paniculata_contig19841:3723..38461691480887.6564114-CDS-H-paniculata_contig19841:3723..3846Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig19841 3724..3846 -
1622929499.542976-CDS-H-paniculata_contig19841:4417..45941622929499.542976-CDS-H-paniculata_contig19841:4417..4594Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig19841 4418..4594 -
1691480887.665946-CDS-H-paniculata_contig19841:4417..45941691480887.665946-CDS-H-paniculata_contig19841:4417..4594Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig19841 4418..4594 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig19841.5063.1

>prot_H-paniculata_contig19841.5063.1 ID=prot_H-paniculata_contig19841.5063.1|Name=mRNA_H-paniculata_contig19841.5063.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=187bp
EACRTDIAENRRLNYHLYQALRKSVYKPAAFYKGMLLPLASAGDCTLREA
SIFASVLARVTIPANHSAVALLKLAQLPYNGASSLFIRVLLNKKYALPYK
VIDALVDHFMTFTTETRLLPVLWHQSLLVFAQRYREDVTRLDKDRLKELL
KTQQHHQITPEVRRQLFMGGCRGDPKTLSVASTPRST
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mRNA from alignment at H-paniculata_contig19841:1827..4594-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig19841.5063.1 ID=mRNA_H-paniculata_contig19841.5063.1|Name=mRNA_H-paniculata_contig19841.5063.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2768bp|location=Sequence derived from alignment at H-paniculata_contig19841:1827..4594- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GAGGCCTGCCGGACTGACATTGCGGAGAATCGGCGGCTGAACTACCATCT CTACCAGGCGTTGCGTAAGTCGGTATATAAACCGGCGGCATTTTACAAGG GCATGCTGTTACCGTTGGCATCCGCAGGCGATTGCACGTTAAGGGAAGCG TCCATCTTTGCCAGTGTTCTGGCGAGGGTGAGTGTTGGCATCTTATACAT CAGTCATTGGACATAATCAAAGTTAAACGGTCTGTTTTTGCATTCACATG TGTGCGTCACAGATGGTTCAGAGAGCAGAGCTACGGTATACGAACGCCGA GTGTTGTGCATGCTGCAGGCACGTACAGCTATAATGTTCAACTCTACACT ATTGACCAGATGCCATGATCGTGACTCTGATGTCAAAATACTGAAAAGCT TGGGATCGAATGGTGAAGATTTAGAATGCCAGGGAAAGTGGTGGGATGGA TTTAATGTTTTTGGGTACCGAATAACAGAACATTATTATGCTGGTGGTGT CGTCCCATCGCTGGTCCACCTTCGTCGTCGTTCACCCCCTTGTTAGTGTC TACATTGTAGTAGAGTGCATCATTTCTGTTGAAGTTGAGCCTATTTTCCC GTGACTCGGACTCTAGCTGTTAATCCGAGGTATTTTGCTCGATGCTAGAT CGTGTCCATTGTTGGGTGTGTGACGCACCGGAATACCCTGCTTTGCTCCC TTTTGATACATAAATGAGTGTCGTTCCTCCGCAATTGCTATCATACAGGT GACCATCCCTGCGAACCACTCCGCCGTAGCCCTGCTCAAGCTGGCGCAGC TCCCGTACAACGGCGCGTCTTCTCTGTTTATACGAGTCTTACTCAACAAA AAGTACGCCCTGCCGTACAAGGTGTGTCAAGCCTCCAGTTGGTGTCCATT GCTGCTGTCGTTTTGTCTTGAAAGTCAACGGTGTTCAATGGCCGCGTAGC TGCGATGCCTGCTGTAATGGCCCGACCAACCAGAAGCGTGTTTCACTCGT CTTGTTATGGCTCGGTTACTGCATTCCCCTCTGATGATGGAGCCTTGTCG GCACTTCGGCGCGCGTTCCATGTGAAAAAGGGCTACGTCTTGTGTTTTTC CATTGGTTTCTATTTTTATTATGAAGGAGAGTGAGTCCATCCAGTTAGCG TCTGATGGACAGAAATGTCATAATCTAACCCTCCGTGTCATGATATACCT GGTTCGCTTTGTTGTCGCCTTTTTTTCCATTACATTTTCTTCATGTTGAT GAAACACAACACTCAGGTTATCGATGCATTGGTGGACCATTTCATGACGT TTACTACGGAAACACGCCTTCTGCCGGTACTTTGGCACCAAAGTCTTCTC GTTTTCGCGCAGCGGTATCGTGAAGACGTCACACGACTTGATAAGGATCG ACTCAAGGAGGTAAGACCTAAATGTAATGAAGTTATAGTGGTAATTTCTC AAGATTTCACGTGCATAATAGTTTTGAGGATTTTTATTTATTTGTTGAAT TGCGAACCCCAACAGACGGGTGTTTTCCCGAGTGACCCGAGAGCGCAGCG ATTCTTAGCGGAGTTATGGTAGATGGAACTGCAACTTGCAGCCAAGATTC TCGGACAATCCTCTGGCTTGCACAGGCGTAGCTCCTCTGACGCCTACTTG GCAACATGTGCTTTCTGCGGGTTGGTGGTGGGCGTCAGCGGTTCTCTCCT AGGCGCCCTTGTGTTAAGTAGAGCTTTGTCATGCATCGGATATTGTATGC CTCAATTCAGCGAGGTATCGGTTCTGATTTTGTAGATGGATCAACTGACC TAATTATTTCCGTCGTGGGGTACCTTCGCTCTGAGGACACCAAACCACGT CGGGCTGCTGCAGTCGGATGTTGTTGAACTCAAAATGGTAGTACTGTGAG GGTCAGGCACGAAAGAGTGGGAGGGTCCGTACCCCAACGGCCTCCCGGGG AAGTTACGTGCCGAGATGAATGTCCGGTTTTGCTTTGTGCGATACAGAGT ACTGTGCACAGTGATTGCGACGTCTTGCCTTCAAGATGCTCACTAAACGT TAACGCTGTACAAGCGTCGTGTCTCGCGAGCATAAACGGCAAGAACACCA TTGGCTCTGTCGACGACCTCATAGTGAGAGAAACCAGTGTCAATTTTCAG TTTTGAAGAGCTTAACTCGAGCATGCCAGCATTTTCACATGAGCGGTTTT ATTGGATTTTGATTGTGGCGAGACACCACGTTTGCCGATTTCTTGGTGCT TATGGCTTGTTTTTTTTTCTCCTTTTTCTAGTTTCCAAAATTTTGAAGGG TGACGATCATTAAACGCTCTGCCCTAAGTTGTATGAGCATGAGCCATCCC GAAAGTATACCTGATTGACCTTTTCAACAATAGAAATTGAATATTGCTTA GTGAAGGAGACCACGATACTTTCTCTCCAAAACAGACTTGAATTGGTGAG TGGCTTCGAATCTCAATACGCTTCTCGGCACTGCAACTTTATCAAGTTTA GATTATCCTGTAATCGTGCGCATGGAAGCGGTTGTATAATGCAACTTGAC TTGGGTATGCTAGACGCTGGGTGTCTACTATAGTGTGTTTGTCCTCCCTG TTCCGATGATGCCTCTTCTGTTTTTTGCTTCATTCGTTATTGGTGTTGCA GCTGCTGAAGACGCAACAACACCACCAGATCACACCCGAAGTACGTCGAC AACTCTTCATGGGGGGTTGCCGGGGTGATCCGAAGACGCTCAGCGTAGCC TCCACGCCTAGGTCGACA
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Coding sequence (CDS) from alignment at H-paniculata_contig19841:1827..4594-

>mRNA_H-paniculata_contig19841.5063.1 ID=mRNA_H-paniculata_contig19841.5063.1|Name=mRNA_H-paniculata_contig19841.5063.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1122bp|location=Sequence derived from alignment at H-paniculata_contig19841:1827..4594- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GAGGCCTGCCGGACTGACATTGCGGAGAATCGGCGGCTGAACTACCATCT
CTACCAGGCGTTGCGTAAGTCGGTATATAAACCGGCGGCATTTTACAAGG
GCATGCTGTTACCGTTGGCATCCGCAGGCGATTGCACGTTAAGGGAAGCG
TCCATCTTTGCCAGTGTTCTGGCGAGGGAGGCCTGCCGGACTGACATTGC
GGAGAATCGGCGGCTGAACTACCATCTCTACCAGGCGTTGCGTAAGTCGG
TATATAAACCGGCGGCATTTTACAAGGGCATGCTGTTACCGTTGGCATCC
GCAGGCGATTGCACGTTAAGGGAAGCGTCCATCTTTGCCAGTGTTCTGGC
GAGGGTGACCATCCCTGCGAACCACTCCGCCGTAGCCCTGCTCAAGCTGG
CGCAGCTCCCGTACAACGGCGCGTCTTCTCTGTTTATACGAGTCTTACTC
AACAAAAAGTACGCCCTGCCGTACAAGGTGACCATCCCTGCGAACCACTC
CGCCGTAGCCCTGCTCAAGCTGGCGCAGCTCCCGTACAACGGCGCGTCTT
CTCTGTTTATACGAGTCTTACTCAACAAAAAGTACGCCCTGCCGTACAAG
GTTATCGATGCATTGGTGGACCATTTCATGACGTTTACTACGGAAACACG
CCTTCTGCCGGTACTTTGGCACCAAAGTCTTCTCGTTTTCGCGCAGCGGT
ATCGTGAAGACGTCACACGACTTGATAAGGATCGACTCAAGGAGGTTATC
GATGCATTGGTGGACCATTTCATGACGTTTACTACGGAAACACGCCTTCT
GCCGGTACTTTGGCACCAAAGTCTTCTCGTTTTCGCGCAGCGGTATCGTG
AAGACGTCACACGACTTGATAAGGATCGACTCAAGGAGCTGCTGAAGACG
CAACAACACCACCAGATCACACCCGAAGTACGTCGACAACTCTTCATGGG
GGGTTGCCGGGGTGATCCGAAGACGCTCAGCGTAGCCTCCACGCCTAGGT
CGACACTGCTGAAGACGCAACAACACCACCAGATCACACCCGAAGTACGT
CGACAACTCTTCATGGGGGGTTGCCGGGGTGATCCGAAGACGCTCAGCGT
AGCCTCCACGCCTAGGTCGACA
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