prot_H-paniculata_contig198.5047.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig198.5047.1
Unique Nameprot_H-paniculata_contig198.5047.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length297
Homology
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BLAST of mRNA_H-paniculata_contig198.5047.1 vs. uniprot
Match: D8LI08_ECTSI (CS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LI08_ECTSI)

HSP 1 Score: 270 bits (690), Expect = 9.400e-87
Identity = 156/300 (52.00%), Postives = 193/300 (64.33%), Query Frame = 0 
Query:    7 KRWPRLRLADTIVVSMILPFCSDTGCQMSDAFVVLAPPHVSTVHARMPRSTEATVATASLDGVSHW-----RTG----GVRGFLH-GFSYRIDKPFPRCLAAGLESGAG-AGAPDGGXGYAPGTGVGMEEYDAEMGMAPVDMDQAMGSFSPEWGNNTDKADPRTHLIKGSVISANQTAFPYAIDSFPPRINSEVYYNGTSERFWWNQDQDSVCVYVPVPRDFDVSSVEFVAKTTHISLKLNKEEILSGTPFYRIDGYESLYVVDLENDPPYVQLELYKFREYQNWEDLLLEGSRFSPRGA 295
            +R P +R A  + + ++LP       Q+SDAFV  AP  V +  +    +   +V   S   +  W     RTG       G  H G + R  +P       G+E+ A  AG  DGG           +E   +  MAPVD+DQAMGSFSPEW N T + + +  LIKGSVI+ANQT FPY+IDSFPP  NSEVYYNGTSER+WWNQ+ D+V VYVPVP+DFD   VEFVAKT HISLK + EE+L+GTPFYRIDGY+SL+V+D +NDPPYVQLEL+K REYQNWED LLE S F+P GA
Sbjct:    6 RRKPLMRRA-ALALGLLLPSLD----QVSDAFVFHAP--VPSTASPCDHAAFESVGLTSNCLLKAWSSRTSRTGRKAPAPDGQRHQGKARRGIRPALMSFEPGVEAAAASAGGGDGG-----------QEQGFDGDMAPVDLDQAMGSFSPEWANGTARVEAKEQLIKGSVIAANQTVFPYSIDSFPPLTNSEVYYNGTSERYWWNQNADAVSVYVPVPKDFDAEKVEFVAKTRHISLKFDGEEVLAGTPFYRIDGYDSLFVLDSDNDPPYVQLELFKVREYQNWEDFLLEKSDFTPGGA 287
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BLAST of mRNA_H-paniculata_contig198.5047.1 vs. uniprot
Match: A0A7S2V6G0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V6G0_9STRA)

HSP 1 Score: 74.3 bits (181), Expect = 4.640e-12
Identity = 37/118 (31.36%), Postives = 64/118 (54.24%), Query Frame = 0 
Query:  172 TAFPYAIDSFPPRINSEVYYNGTSERFWWNQDQDSVCVYVPVPRDFDVSSVEFVAKTTHISLKLNKEE-----ILSGTPFYRIDGYESLYVVDLENDPPYVQLELYKFREYQNWEDLL 284
            ++FPY    FP   +S  Y+ G ++ + W Q+ + VC+Y+PV    D S V+   +   + LKL   +     +L GT    I   +S +  + ++ PP++ +EL KF++Y+NWE L 
Sbjct:   93 SSFPYDPFLFPELRDSTKYWRGATQEYKWEQNHNKVCIYIPVDETVDKSDVDVEFEVHRLLLKLGGRDTKVGGLLGGT----IKPEDSYWFWESDSSPPFITIELQKFKQYRNWEFLF 206
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig198.5047.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LI08_ECTSI9.400e-8752.00CS domain-containing protein n=2 Tax=Ectocarpus Ta... [more]
A0A7S2V6G0_9STRA4.640e-1231.36Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007052CS domainPFAMPF04969CScoord: 197..258
e-value: 9.5E-5
score: 23.3
IPR007052CS domainPROSITEPS51203CScoord: 193..284
score: 11.175
IPR008978HSP20-like chaperoneGENE3D2.60.40.790coord: 193..285
e-value: 6.5E-12
score: 47.8
IPR008978HSP20-like chaperoneSUPERFAMILY49764HSP20-like chaperonescoord: 190..289

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig198contigH-paniculata_contig198:1767..16008 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig198.5047.1mRNA_H-paniculata_contig198.5047.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig198 1086..16045 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig198.5047.1 ID=prot_H-paniculata_contig198.5047.1|Name=mRNA_H-paniculata_contig198.5047.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=297bp
MSYNRRKRWPRLRLADTIVVSMILPFCSDTGCQMSDAFVVLAPPHVSTVH
ARMPRSTEATVATASLDGVSHWRTGGVRGFLHGFSYRIDKPFPRCLAAGL
ESGAGAGAPDGGGGYAPGTGVGMEEYDAEMGMAPVDMDQAMGSFSPEWGN
NTDKADPRTHLIKGSVISANQTAFPYAIDSFPPRINSEVYYNGTSERFWW
NQDQDSVCVYVPVPRDFDVSSVEFVAKTTHISLKLNKEEILSGTPFYRID
GYESLYVVDLENDPPYVQLELYKFREYQNWEDLLLEGSRFSPRGAG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007052CS_dom
IPR008978HSP20-like_chaperone