mRNA_H-paniculata_contig1979.5044.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig1979.5044.1
Unique NamemRNA_H-paniculata_contig1979.5044.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
[Close]
BLAST of mRNA_H-paniculata_contig1979.5044.1 vs. uniprot
Match: A0A6H5JMB5_9PHAE (JmjC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMB5_9PHAE)

HSP 1 Score: 184 bits (468), Expect = 4.790e-48
Identity = 139/336 (41.37%), Postives = 173/336 (51.49%), Query Frame = 1 
Query:   49 EVEEAQAALERGDEGAAKRLALAEEELEKALXXXXXXXXXXXXXXXXXXXXXXXXSDSDGGPGFFDGVNDNPTLEEFTRLGAAAAPQLIGSARRXXXXXXXXXXXSAN-----------------------GDGDRGSXXXXXXXXXGIKHADLAAETREVNRVEDERCDGTRKSGMLIPAATES-------SSGEHAAEEDGYDGEPVGVKRFS--------SNKAAPSNFSKVDPSLPASELRERFPMFLEAEGCTVEVKAGQMLFLPAGWFHEVTSHASEDGHMAFNYWFHPPDAIESTTRKKSAGDAAMNPYTSSFWQNDWDARLKEDGGGL 942
            +V  AQAALERG+ GAA+RL  AEEELE+AL                        SDS+GGPGFFDG+ND+P+ E F       A    G  R            +A                               XXXXXXXXX          +   +R  D   +G  ++G                 +G   AE+D   GE    KR          ++K+AP+NFS+VDPSLP +EL ERFP+FLEAE CTVEV+AGQML+LPAGWFHEV+S ASE+GHMAFNYWFHPPD+  S++          +PY SSFWQ DW+AR +E+GGGL
Sbjct:  320 QVAAAQAALERGESGAAQRLEAAEEELERALEAVLDAECAGGAGFGDGGSGESS-SDSEGGPGFFDGINDDPSEEAFLAASTRTARGASGGVRVSDGGGGRSDDLAAGLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKPSGANSRSSDNGENGWVEAGXXXXXXXXXXXXXXXVENGGGRAEQDPAAGEGRTAKRRKIEGQEQQGASKSAPANFSRVDPSLPRAELAERFPLFLEAESCTVEVEAGQMLYLPAGWFHEVSSVASENGHMAFNYWFHPPDSFGSSS----------SPYESSFWQRDWEAR-QEEGGGL 643
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BLAST of mRNA_H-paniculata_contig1979.5044.1 vs. uniprot
Match: D8LM10_ECTSI (JmjC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM10_ECTSI)

HSP 1 Score: 141 bits (356), Expect = 9.300e-33
Identity = 141/349 (40.40%), Postives = 170/349 (48.71%), Query Frame = 1 
Query:   34 RSPEEEVEEAQAALERGDEGAAKRLALAEEELEKALXXXXXXXXXXXXXXXXXXXXXXXXSDSDGGPGFFDGVNDNPTLEEF----TRL--GAAAAPQLIGSARRXXXXXXXXXXXSANGDGDRGSXXXXXXXXXGIKHADLAAETREVN-------------RVEDERCDGTRKSGMLI----------------------PAATESSSGEHAAEEDGYDGEPVGVKRFSSNKAAPSNFSKVDPSLPASELRERFPMFLEAEGCTVEVKAGQMLFLPAGWFHEVTSHASEDGHMAFNYWFHPPDAIESTTRKKSAGDAAMNPYTSSFWQNDWDARLKEDGGGLL*GQD 957
            R  EEEV  AQAALERG+ GAA+RL  AEEELE+AL                        SDS+GGPGFFDG+ND+P+ E F    TR   GA+    + G    XXXXXXXXXXX          XXXXXXXXX                            R  D R  G  ++G                         PAA E  + +    E        G ++   +K+AP NFS+VDPSLP +EL ERFP+FLEAE CTVEV+AGQML+LPAGWFHEV+S ASE+GHMAFNY                                DW+AR +E+GGGL  G++
Sbjct:  304 RKSEEEVAAAQAALERGESGAAQRLEAAEEELERALEAVLDAECAGGAGFGDGGSGESS-SDSEGGPGFFDGINDDPSEEAFLAASTRKARGASGGVGVSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKPRGADSRSSGNGENGWAEAGSXXXXXXREVENGGDRPEREPAADEGRTAKRRKTE--------GQEQQRESKSAPVNFSRVDPSLPLAELAERFPLFLEAESCTVEVEAGQMLYLPAGWFHEVSSVASENGHMAFNYXXXXXXXXXXX----------XXXXXXXXXLRDWEAR-QEEGGGLGAGEE 632
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BLAST of mRNA_H-paniculata_contig1979.5044.1 vs. uniprot
Match: L8GL11_ACACA (JmjC domain-containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GL11_ACACA)

HSP 1 Score: 117 bits (294), Expect = 8.960e-25
Identity = 58/110 (52.73%), Postives = 67/110 (60.91%), Query Frame = 1 
Query:  604 SNKAAPSNFSKVDPSLPASELRERFPMFLEAEGCTVEVKAGQMLFLPAGWFHEVTSHASEDG--HMAFNYWFHPPDAIESTTRKKSAGDAAMNPYTSSFWQNDWDARLKE 927
            S  A P NFSKVD +LPA E   R+P+  EA     EV+AG MLFLPAGWFH VTS +  D   HMAFNYWFHPPDA                PY S+FWQ+DW+AR  +
Sbjct:  461 SGPALPQNFSKVDMTLPADEREARWPLLREASMIECEVRAGDMLFLPAGWFHNVTSFSDNDAGLHMAFNYWFHPPDA-----------STYAQPYHSNFWQHDWEARTPQ 559
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BLAST of mRNA_H-paniculata_contig1979.5044.1 vs. uniprot
Match: A0A836CK29_9STRA (Cupin-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK29_9STRA)

HSP 1 Score: 110 bits (274), Expect = 7.690e-23
Identity = 53/116 (45.69%), Postives = 70/116 (60.34%), Query Frame = 1 
Query:  592 KRFSSNKAAPSNFSKVDPSLPASELRERFPMFLEAEGCTVEVKAGQMLFLPAGWFHEVTSHASED-------GHMAFNYWFHPPDAIESTTRKKSAGDAAMNPYTSSFWQNDWDAR 918
            K  + + + P NFS+VD  L   ++++++P+F    GC  EV  GQML+LPAGWFHEVTS++S         GH+AFNYW+HPPD IE T  K         PY S FW+ DW  R
Sbjct:  262 KATTGDVSPPDNFSQVDLKLSEQQIKQQYPLFAAMYGCEAEVLPGQMLYLPAGWFHEVTSYSSSKDAAADCPGHLAFNYWYHPPD-IEGTYEK---------PYLSDFWEKDWTNR 367
[Close]
BLAST of mRNA_H-paniculata_contig1979.5044.1 vs. uniprot
Match: A0A6U2DHF7_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6U2DHF7_HEMAN)

HSP 1 Score: 102 bits (253), Expect = 1.480e-22
Identity = 50/114 (43.86%), Postives = 68/114 (59.65%), Query Frame = 1 
Query:  577 EPVGVKRFSSNKAAPSNFSKVDPSLPASELRERFPMFLEAEGCTVEVKAGQMLFLPAGWFHEVTSHASEDGHMAFNYWFHPPDAIESTTRKKSAGDAAMNPYTSSFWQNDWDAR 918
            E +GVKR +   A P +FS VD  L A +L  ++P++L+    + E+  G ML+LPAGWFH VTS+    GH+A NYWFHPPD+ +    +         PY S FW+ DW AR
Sbjct:    2 ECMGVKRTT---ADPLSFSTVDFGLSAEKLAGKYPLYLKCVKESCEISEGDMLYLPAGWFHNVTSYGEGKGHIAMNYWFHPPDSNKPQFER---------PYQSDFWERDWRAR 103
[Close]
BLAST of mRNA_H-paniculata_contig1979.5044.1 vs. uniprot
Match: A0A2D4BXC6_PYTIN (Ion channel putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BXC6_PYTIN)

HSP 1 Score: 110 bits (274), Expect = 6.320e-22
Identity = 55/127 (43.31%), Postives = 70/127 (55.12%), Query Frame = 1 
Query:  556 EEDGYDGEPVGVKRFSSNKAAPSNFSKVDPSLPAS-----ELRERFPMFLEAEGCTVEVKAGQMLFLPAGWFHEVTSHASEDGHMAFNYWFHPPDAIESTTRKKSAGDAAMNPYTSSFWQNDWDARL 921
            +EDGY       K        P NFS+VD S+ +       LRE+FP F  A+    ++  G+MLFLPA WFHEV S  S DGH+A NYW+HPPD +          D   NPY+S FW  DW+AR+
Sbjct:  789 DEDGY----TAKKSVDKTVKDPVNFSRVDTSMLSDPEQRERLREQFPGFFHAKAAFCDIHVGEMLFLPASWFHEVESFGSADGHLALNYWYHPPDQL----------DRFENPYSSPFWPRDWEARM 901
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BLAST of mRNA_H-paniculata_contig1979.5044.1 vs. uniprot
Match: A0A2P6V366_9CHLO (ABC transporter E family member 2 n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6V366_9CHLO)

HSP 1 Score: 108 bits (269), Expect = 3.290e-21
Identity = 55/106 (51.89%), Postives = 66/106 (62.26%), Query Frame = 1 
Query:  619 PSNFSKVDPSLPASELRERFPMFL-EAEGCTVEVKAGQMLFLPAGWFHEVTSH--ASEDGHMAFNYWFHPPDAIESTTRKKSAGDAAMNPYTSSFWQNDWDARLKE 927
            P +FS+VD  LP SEL+ RFP F  +A    VEV AGQML+LPAGWFHEVTS+  A    H+A NYW+HPPD +E+      A  A   PYT  FW   W  R +E
Sbjct: 1235 PESFSRVDLGLPDSELQRRFPRFPGKAAAIEVEVTAGQMLYLPAGWFHEVTSYSAAGSPTHLALNYWYHPPDNLEA-----GAAAAVERPYTQGFWPALWKGRRRE 1335
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BLAST of mRNA_H-paniculata_contig1979.5044.1 vs. uniprot
Match: A0A3L6UVS1_9STRA (JmjC domain-containing protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3L6UVS1_9STRA)

HSP 1 Score: 101 bits (251), Expect = 3.430e-21
Identity = 47/102 (46.08%), Postives = 61/102 (59.80%), Query Frame = 1 
Query:  619 PSNFSKVDPSLPASELRERFPMFLEAEGCTVEVKAGQMLFLPAGWFHEVTSH--ASEDGHMAFNYWFHPPDAIESTTRKKSAGDAAMNPYTSSFWQNDWDAR 918
            P +FS+V  + P  +L+  FP F +A     +V  G+ML+LPA WFHEV S   A++DGH+A NYW+HPPDA           D    PYTS FW ND+ AR
Sbjct:  103 PVSFSRVKTNRPNDDLQREFPRFADARAAFCDVNVGEMLYLPASWFHEVVSFNGATDDGHLALNYWYHPPDAT----------DCFATPYTSPFWTNDYAAR 194
[Close]
BLAST of mRNA_H-paniculata_contig1979.5044.1 vs. uniprot
Match: A0A485KTZ7_9STRA (Aste57867_11816 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KTZ7_9STRA)

HSP 1 Score: 105 bits (263), Expect = 4.140e-21
Identity = 49/100 (49.00%), Postives = 64/100 (64.00%), Query Frame = 1 
Query:  619 PSNFSKVDPSLPASELRERFPMFLEAEGCTVEVKAGQMLFLPAGWFHEVTSHASEDGHMAFNYWFHPPDAIESTTRKKSAGDAAMNPYTSSFWQNDWDAR 918
            P+NFS+V    PA+E+   FP F +A+    +V+ G+ML+LPA WFHEV S+ +E GH+A NYW+HPPDA           D   NPYTS FW ND+ AR
Sbjct:  344 PTNFSRVKTDRPAAEITADFPRFHDAKAVFADVQVGEMLYLPASWFHEVVSYGNE-GHLALNYWYHPPDAA----------DNFANPYTSDFWSNDFAAR 432
[Close]
BLAST of mRNA_H-paniculata_contig1979.5044.1 vs. uniprot
Match: A0A2P6U3K9_CHLSO (Ion channel n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6U3K9_CHLSO)

HSP 1 Score: 105 bits (261), Expect = 8.000e-21
Identity = 51/106 (48.11%), Postives = 69/106 (65.09%), Query Frame = 1 
Query:  619 PSNFSKVDPSLPASELRERFPMFL-EAEGCTVEVKAGQMLFLPAGWFHEVTSHASED--GHMAFNYWFHPPDAIESTTRKKSAGDAAMNPYTSSFWQNDWDARLKE 927
            P +F KVD +LP ++L+++FP F  +A      V+AGQML+LPAGWFHEVTS+A++D   H+A NYW+HPPD +      K A      PYTS+FW   W+ R  E
Sbjct:  267 PDSFCKVDLNLPDAQLKKKFPQFPGKAAALECIVEAGQMLYLPAGWFHEVTSYATDDCPTHLALNYWYHPPDNL------KDASTVLEQPYTSAFWPAVWEGRRAE 366
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1979.5044.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JMB5_9PHAE4.790e-4841.37JmjC domain-containing protein n=1 Tax=Ectocarpus ... [more]
D8LM10_ECTSI9.300e-3340.40JmjC domain-containing protein n=1 Tax=Ectocarpus ... [more]
L8GL11_ACACA8.960e-2552.73JmjC domain-containing protein n=1 Tax=Acanthamoeb... [more]
A0A836CK29_9STRA7.690e-2345.69Cupin-like domain-containing protein n=1 Tax=Tribo... [more]
A0A6U2DHF7_HEMAN1.480e-2243.86Hypothetical protein n=1 Tax=Hemiselmis andersenii... [more]
A0A2D4BXC6_PYTIN6.320e-2243.31Ion channel putative n=1 Tax=Pythium insidiosum Ta... [more]
A0A2P6V366_9CHLO3.290e-2151.89ABC transporter E family member 2 n=1 Tax=Micracti... [more]
A0A3L6UVS1_9STRA3.430e-2146.08JmjC domain-containing protein n=4 Tax=Aphanomyces... [more]
A0A485KTZ7_9STRA4.140e-2149.00Aste57867_11816 protein n=1 Tax=Aphanomyces stella... [more]
A0A2P6U3K9_CHLSO8.000e-2148.11Ion channel n=1 Tax=Chlorella sorokiniana TaxID=30... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1979contigH-paniculata_contig1979:16228..20247 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score120.9
Seed ortholog evalue4.9e-25
Seed eggNOG ortholog2880.D8LM10
Hectar predicted targeting categoryother localisation
GOsGO:0000228,GO:0000785,GO:0000790,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005694,GO:0006325,GO:0006338,GO:0006464,GO:0006482,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0008214,GO:0009987,GO:0016043,GO:0016569,GO:0016570,GO:0016577,GO:0019538,GO:0031974,GO:0031981,GO:0032451,GO:0032452,GO:0036211,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044454,GO:0044464,GO:0051276,GO:0070013,GO:0070988,GO:0071704,GO:0071840,GO:0140096,GO:1901564
EggNOG free text desc.Cupin-like domain
EggNOG OGsCOG1226@1,KOG2508@2759
Ec32 ortholog descriptionJumonji domain protein
Ec32 orthologEc-14_002420.1
COG Functional cat.P
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons4
Model size1397
Cds size441
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1979.5044.1prot_H-paniculata_contig1979.5044.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig1979 16677..18193 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929495.0790613-UTR-H-paniculata_contig1979:16227..166761622929495.0790613-UTR-H-paniculata_contig1979:16227..16676Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1979 16228..16676 -
1691480886.527681-UTR-H-paniculata_contig1979:16227..166761691480886.527681-UTR-H-paniculata_contig1979:16227..16676Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1979 16228..16676 -
1622929495.1297507-UTR-H-paniculata_contig1979:18193..185131622929495.1297507-UTR-H-paniculata_contig1979:18193..18513Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1979 18194..18513 -
1691480886.561044-UTR-H-paniculata_contig1979:18193..185131691480886.561044-UTR-H-paniculata_contig1979:18193..18513Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1979 18194..18513 -
1622929495.142105-UTR-H-paniculata_contig1979:19513..196491622929495.142105-UTR-H-paniculata_contig1979:19513..19649Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1979 19514..19649 -
1691480886.571873-UTR-H-paniculata_contig1979:19513..196491691480886.571873-UTR-H-paniculata_contig1979:19513..19649Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1979 19514..19649 -
1622929495.1536264-UTR-H-paniculata_contig1979:20196..202471622929495.1536264-UTR-H-paniculata_contig1979:20196..20247Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1979 20197..20247 -
1691480886.582081-UTR-H-paniculata_contig1979:20196..202471691480886.582081-UTR-H-paniculata_contig1979:20196..20247Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1979 20197..20247 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929495.0938427-CDS-H-paniculata_contig1979:16676..168621622929495.0938427-CDS-H-paniculata_contig1979:16676..16862Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1979 16677..16862 -
1691480886.540652-CDS-H-paniculata_contig1979:16676..168621691480886.540652-CDS-H-paniculata_contig1979:16676..16862Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1979 16677..16862 -
1622929495.1169577-CDS-H-paniculata_contig1979:17938..181931622929495.1169577-CDS-H-paniculata_contig1979:17938..18193Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1979 17939..18193 -
1691480886.551162-CDS-H-paniculata_contig1979:17938..181931691480886.551162-CDS-H-paniculata_contig1979:17938..18193Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1979 17939..18193 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig1979.5044.1

>prot_H-paniculata_contig1979.5044.1 ID=prot_H-paniculata_contig1979.5044.1|Name=mRNA_H-paniculata_contig1979.5044.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=147bp
MLIPAATESSSGEHAAEEDGYDGEPVGVKRFSSNKAAPSNFSKVDPSLPA
SELRERFPMFLEAEGCTVEVKAGQMLFLPAGWFHEVTSHASEDGHMAFNY
WFHPPDAIESTTRKKSAGDAAMNPYTSSFWQNDWDARLKEDGGGLL*
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mRNA from alignment at H-paniculata_contig1979:16228..20247-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig1979.5044.1 ID=mRNA_H-paniculata_contig1979.5044.1|Name=mRNA_H-paniculata_contig1979.5044.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4020bp|location=Sequence derived from alignment at H-paniculata_contig1979:16228..20247- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GCCAGCTATGGAGGGAGAGGGGCAGGGAGCGTCAGGAGCCCGGAAGAAGA
GGTAATGAGCCTTTTTTTGATACTTGTACGCTTAATGGTATATAGCTTCA
TGCTCAACGTGCAACCCGGGGTTCCATTTAGGGAGCTCATGTCCATGGGC
AATATGTGCTCGTTTCTGCTGTGTAAAGGTGAAGGTTCAGATCGACTCGA
TGCGTTATATATGGGGTTGAAGGGATAGGATGTGTTATTTTTCCATCTCT
GGCTCAGACGCGCTAGATGGGTAGGAAATTTTCGCAAAAATGAAAAGAAA
ATACTAAGGGGAAGGGGAAGGGGGAAGGTCAACGAGGGGCGGAACAACAT
GCGGATCAGATGCTCTTTTTATTAGGGGGTAAATGTGTATGACCGTAGTA
AACTAGCACTTGTATTGTGCATAGACACGACAATACCTACCAGGACGAGT
GTACACCTGAACTACGTTCGTATACCCACTTGATCTGCGACACGTCATTC
ACAATCAACCCGCTTCTATTTCACCACACAACGTACTAGTTAAGTACATA
CTCCTTGTCGCTCTCCCCGTGTGCCCGTGGTGTGTCGATGTGGCTCAGGT
AGAGGAGGCGCAGGCAGCTCTGGAGAGGGGGGACGAGGGGGCGGCGAAGA
GGCTGGCGTTGGCCGAGGAAGAATTGGAAAAGGCATTGGAGGCAGTGCTT
GATGCCGAGTGCACAGCAGGGGGCGGTTTCGGCGGTGAGGCATAACGTTT
TTGTTTTTTTCCTTCGAGGTGGAAAAGGAGAAGGAGAAGTCAATTAATCT
AACATACAGTTTCTGAAATTGATTTCGAATACTACGCTATGACTGACCAG
GCGTGATTTTTTCCTGTGTGGTGGAAGGTTGTTTGTTTTCTGTTGCTGGC
AAACAGCTCATTTATGGTGACACCAAGCGCTGGGACGCGTCGTATCTTAT
ACAAGACACATGATACTTTGGTTAAATAAGTTTTCCCGTGCAGCGTTTTT
GATCTTTGGATTCAGTTTACCCGCCCTATTGATTCAATTTTTCCTGAAAA
GTGTATACAACTGAAGGTTACTGAAATCAGTTGCATAGCCTCAACACGAG
TACAGTAGCGTTGTTATGTGACGTTCAGCGTTATAGTTGAACTAACCATG
ACAGGGTTGTTTTATTTTTCATGGTGTCGGTCATTCATACGAAAACTATT
TCATGCTCACGTACGGAACAGATGCGAGTGATTCAGTGATTTTCCCTTTG
TGAATTTTGCCGTAGCCCATGTCGTGCGTGGTCGAAGAGGTGCGAGAAGT
CCTGGTTCTTGGTCATGATGGCGTTAGAATGATTCGTCGATCTACCAAGC
TGCGAACCCAAATATCCCGTCAAGTCCACTGGAAATTCATTTCACCTGGG
TGAGCATGCCTAGATGGATCTGGATGAATTGTAGGCGCAATGATGGAGGA
GTGAGTACTTGCTCATGCACAACTCCTTGAGCGTCATGCACTCTAAGCGC
TCACAAGGGGGGTAGCTAGTCCCCAGGCTTGGCTAGCGCTGCAAAATATG
AGTACACTCTGCTCATATGGAGTCGTATATTGAAGTCATTTTACTCTCTC
TTTGGTGTCCAACAGTCATTCATGTTCCTCTTCTGCAAATCTTGGTCCGT
AAAGTCAGCTTTTCGGGTTTACCCTCACCTTCCACTTCCTCCCGTGGACT
CTTCTCGATGATGCACAATTTTTTCCACCACCAGACGGTGACGATTCAGG
AGAAGACTCTTCTGACAGCGACGGCGGTCCCGGCTTCTTCGACGGTGTTA
ACGACAACCCGACCCTCGAAGAGTTTACCCGCCTGGGAGCTGCTGCTGCG
CCGCAACTAATAGGCTCTGCGAGGAGGAAAGATAAAAGGAGGAGGGAGGA
GGGAGGCGGAAGCGCGAACGGTGACGGGGACCGGGGAAGCGATGGCGGCG
GTTTGGTTAACGGGGCCGGAATAAAGCATGCCGACCTTGCCGCTGAAACC
AGAGAAGTAAATAGAGTGGAGGACGAGCGCTGTGACGGCACAAGAAAAAG
CGGGATGCTAATTCCAGCGGCCACCGAAAGTAGTAGCGGAGAACACGCAG
CGGAGGAGGATGGCTACGACGGGGAGCCCGTGGGGGTGAAACGTTTTTCA
TCTAACAAGGCAGCTCCTTCAAATTTCAGTAAGGTGGATCCGTCGCTTCC
TGCTTCGGAGCTCCGGGAGAGGTTTCCTATGTTTTTGGAGGCGGAGGGGT
GCACGGTGGAGGTCAAGGCAGGGCAGATGCTGTTCCTTCCCGCGGGCTGG
TTCCATGAGGTGAGTGGGGTGGAATCAAGCTGGCGCAAGAAAATCATCCC
CAAAAGTACAAGCACCTGCGATATAGGGGGGGGGGTGATATTTTCGTGGG
GTCCGTCTTTTTATTTAGAGGATATCTTGCCTTACAGGAAGCTCGACCGT
TTCGTTTTCTGGGGGGGGCGATTTGATATCAAGACGAAACTGGACGGTGA
ACGCGAGCAGTCTGTTGTACACCACGGCCATTGTTTCGCGCCACAAGGGC
AGGTTAGACCCCCCCCCCCCCCCCCAAGTGTCTTGGTAATACTGTCACAA
AAAAAATAATCGGAGATCCCCTCACACGCGTTTTGCGCGACTATTGAGCT
TTTCTGCAAATTTCTCTGCACCCGAAAAAGGGAGGATTTGGAGCTATTGT
CGTTACTTCGTATCCTTGACATCCGCTGGTGAATCTCCTCTGAAGGCAAA
ACGTCATGGGTTCAAATAAGCTATTTCGAGCGTTGTTCTAATGCAGCGTA
CGGCAAATACATTGAGACAAAGTTCTACTGTTTTCAACCTTTTCGCTCCC
CCTTTTTTGTGTTTCACGAAAAAACGAATCGAAGGAAACCCCGTATGGTG
CAGTATTGAACAACCAAGCAGCAGCGAAGTACAATTTTAGCCCCCGCGTA
TCACATTGTCTGTGTTTGTTACTTCCTCAGAGCGGAAGACCATTTTGTCG
AACACGATGGTCGAGGTTCAAGAATGATAATAGTGTACCCAGAAAGTTAT
CAGAACGTTCCAGTCTGGGTGGTTTTGAGGTGTGCCCCAAGAGAGTATTT
GCTTATATCGGCGCCTGACGGCGCCGATTTGAGCTCTGTCAACGCACACT
TTACGTAGGATATGGGGTTCAGGCTTAGGGTTATTGTTAATTCCCGCGTT
TGTCCTGCTCGTGTTTGAGCACCACGAAGCGTGAACCATTAAAAAGTAAA
CATTTCAACTAGTGTCTTCGATCACATGGTAAACGAGGCTTAAATAACCT
CTTTTCTTCTCTTATGGCTACCTTTTTCACCCATAATCTTTAGATTTTCC
TATATATTTTGCATTTTGTTCATCTTGGGTCGAAGGTAACATCGCACGCC
TCCGAGGACGGACACATGGCGTTCAATTACTGGTTCCACCCACCAGATGC
AATCGAATCTACAACAAGGAAAAAGAGCGCAGGCGACGCAGCAATGAATC
CGTACACATCGTCTTTCTGGCAGAACGACTGGGACGCACGCCTAAAGGAG
GACGGCGGGGGGTTACTGTAGGGTCAAGATACTTTTCGAGGAGCCGGCTT
GTTGGCCGAAGAGCCATGGTTGATAGACTGATCAACTTGTAGCAGTAGTA
TGGACTGAGCGTCTTGCTCAAACCGTGTTTTTGTAGTCGCGAACAGGCTC
TGAGTGGACCGCGGCGGAGCTCAAAGCGCAGCGTTTGCCTGTGTCGTATG
TGCCCCTCGAAGTGTATTTCTTAAATTTGTTGACTTTAAAGTTACCGTTT
TGATGTGCATGGGATGTTAGAGGGGTCTTTGTTTCTGTTGGTGTAATATG
TGCACGCTCATGTGAGAATGACGTACCCCTTTAATGTTTGACATGAATAA
TGTAACTCGCGAAGATTGTCATGAAGACGTGCACGTCGTGCCCCGTGTTG
TTCCGTCACCATCGTGCTGATTTCGATGATTTAATATTGTTCCTGCGGTC
ACTTTGACGTTCGAAATGCT
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Coding sequence (CDS) from alignment at H-paniculata_contig1979:16228..20247-

>mRNA_H-paniculata_contig1979.5044.1 ID=mRNA_H-paniculata_contig1979.5044.1|Name=mRNA_H-paniculata_contig1979.5044.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=882bp|location=Sequence derived from alignment at H-paniculata_contig1979:16228..20247- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCTAATTCCAGCGGCCACCGAAAGTAGTAGCGGAGAACACGCAGCGGA
GGAGGATGGCTACGACGGGGAGCCCGTGGGGGTGAAACGTTTTTCATCTA
ACAAGGCAGCTCCTTCAAATTTCAGTAAGGTGGATCCGTCGCTTCCTGCT
TCGGAGCTCCGGGAGAGGTTTCCTATGTTTTTGGAGGCGGAGGGGTGCAC
GGTGGAGGTCAAGGCAGGGCAGATGCTGTTCCTTCCCGCGGGCTGGTTCC
ATGAGATGCTAATTCCAGCGGCCACCGAAAGTAGTAGCGGAGAACACGCA
GCGGAGGAGGATGGCTACGACGGGGAGCCCGTGGGGGTGAAACGTTTTTC
ATCTAACAAGGCAGCTCCTTCAAATTTCAGTAAGGTGGATCCGTCGCTTC
CTGCTTCGGAGCTCCGGGAGAGGTTTCCTATGTTTTTGGAGGCGGAGGGG
TGCACGGTGGAGGTCAAGGCAGGGCAGATGCTGTTCCTTCCCGCGGGCTG
GTTCCATGAGGTAACATCGCACGCCTCCGAGGACGGACACATGGCGTTCA
ATTACTGGTTCCACCCACCAGATGCAATCGAATCTACAACAAGGAAAAAG
AGCGCAGGCGACGCAGCAATGAATCCGTACACATCGTCTTTCTGGCAGAA
CGACTGGGACGCACGCCTAAAGGAGGACGGCGGGGGGTTACTGTAGGTAA
CATCGCACGCCTCCGAGGACGGACACATGGCGTTCAATTACTGGTTCCAC
CCACCAGATGCAATCGAATCTACAACAAGGAAAAAGAGCGCAGGCGACGC
AGCAATGAATCCGTACACATCGTCTTTCTGGCAGAACGACTGGGACGCAC
GCCTAAAGGAGGACGGCGGGGGGTTACTGTAG
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