prot_H-paniculata_contig1979.5039.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig1979.5039.1 vs. uniprot
Match: A0A6H5KLH5_9PHAE (PseudoU_synth_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLH5_9PHAE) HSP 1 Score: 278 bits (711), Expect = 8.810e-89 Identity = 174/314 (55.41%), Postives = 205/314 (65.29%), Query Frame = 0
Query: 1 RPSFDATQVLHMDNQMLWINKPAGLLSQGDRTGDVDVLALSREYVRVTTNKPGEAFVAMVHRLDRPGKTTKIYALMSGVMCIARTSKAAARLSASFRDRDSVEKTYYAVVTGELSGSGTREDLLVPVFSSVNGAKGVRGPRMTVVRESVAAGAAEEGGSRSAGRAEAGTKGSQRAVLEWEAIH-NLTSANAKLCHPTGGGADRPHTLVRIKLITGRKHQIRAQLAGMGHPIVGDVRYGGRSSVSYRGESRGSRNGKDRVEVMEEFETGSSGLSPLKDKSILLHASELAVPHPTRPGEAVRMRAPPPDCWAELCG 313
RPSF VL+MDN +L +NKPAGLLSQ DRTGD DV AL+REYVRV NK GEAFVA+VHRLDRP +SGVMC+ARTSKAAARLSASFR RD VEK Y+AVV G L+G G R+D LV +S A+ RGPR + V GA GG A + ++G + A LEWEAI + +SA+ C TG P TLVR++LITGRKHQIR QLA MGHP+VGD RYG RSS +SRG D + + + PL+D+SILLHASEL VPHPTR G VR A PP W++LCG
Sbjct: 38 RPSFRVEDVLYMDNHVLLVNKPAGLLSQSDRTGDADVAALAREYVRVAANKTGEAFVALVHRLDRP---------VSGVMCVARTSKAAARLSASFRARDGVEKIYHAVVAGGLAGRGIRQDFLVSPDASGAVARRGRGPRTGLSSAPVRGGA---GGRLLAAGPTSSSEG-KLAQLEWEAIDVSPSSADRLRCPRTGN----PRTLVRVRLITGRKHQIRVQLAEMGHPVVGDTRYG-RSSWC---QSRGG----DATDESAVPPPRAGSMEPLEDRSILLHASELIVPHPTRVGAMVRAVAAPPGMWSDLCG 326
BLAST of mRNA_H-paniculata_contig1979.5039.1 vs. uniprot
Match: D8LGZ5_ECTSI (23S RNA-specific pseudouridylate synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGZ5_ECTSI) HSP 1 Score: 182 bits (462), Expect = 9.650e-53 Identity = 118/234 (50.43%), Postives = 140/234 (59.83%), Query Frame = 0
Query: 80 MCIARTSKAAARLSASFRDRDSVEKTYYAVVTGELSGSGTREDLLVPVFSSVNGAKGVRGPRMTVVRESVAAGAAEEGGSRSAGRAEAGTKGSQRAVLEWEAIHNLTSANAKLCHPTGGGADRPHTLVRIKLITGRKHQIRAQLAGMGHPIVGDVRYGGRSSVSYRGESRGSRNGKDRVEVMEEFETGSSGLSPLKDKSILLHASELAVPHPTRPGEAVRMRAPPPDCWAELCG 313
MC+ARTSKAAARLSASFR RD VEK Y+AVV G L+G G R+DLLV +S A+ RGPR + GA G R + + A LEWEAI+ +S+ +L P G P TLVR++LITGRKHQIR QLA MGHP+VGD RYG SRG + D V G + PL+D+SILLHASEL VPHPTR G VR A PP W++LCG
Sbjct: 1 MCVARTSKAAARLSASFRARDDVEKIYHAVVAGSLAGRGIRQDLLVSPDASGAVARRGRGPRAGLSSVPARGGA----GGRLLAAGPTSSPDGKLAQLEWEAINVSSSSAVRLRCPRTGN---PRTLVRVRLITGRKHQIRVQLAEMGHPVVGDTRYG---------RSRGG-DATDESAVPPPRRAGR--IEPLEDRSILLHASELIVPHPTRVGATVRAVAAPPGMWSDLCG 215
BLAST of mRNA_H-paniculata_contig1979.5039.1 vs. uniprot
Match: A0A259TYX9_9BACT (PseudoU_synth_2 domain-containing protein n=1 Tax=Rubricoccus marinus TaxID=716817 RepID=A0A259TYX9_9BACT) HSP 1 Score: 161 bits (408), Expect = 9.540e-45 Identity = 116/304 (38.16%), Postives = 150/304 (49.34%), Query Frame = 0
Query: 8 QVLHMDNQMLWINKPAGLLSQGDRTGDVDVLALSREYVRVTTNKPGEAFVAMVHRLDRPGKTTKIYALMSGVMCIARTSKAAARLSASFRDRDSVEKTYYAVVTGELSGSGTREDLLVPVFSSVNGAKGVRGPRMTVVRESVAAGAAEEGGSRSAGRAEAGTKGSQRAVLEWEAIHNLTSANAKLCHPTGGGADRPHTLVRIKLITGRKHQIRAQLAGMGHPIVGDVRYGGRSSVSYRGESRGSRNGKDRVEVMEEFETGSSGLSPLKD-KSILLHASELAVPHPTRPGEAVRMRAPPPDCWAE 310
++L +DN +L + KPAG+LSQGD TGD DV ++ +++ NKPG FV +V RLDRP SGVM +ARTSKAA+RL+ FR R SVEK Y A+V G+L GSG ED L F + + G R R++ T G+++AVLEW A+ + R TLVR+ L TGR HQ+R QL G+GHPIVGD+RY + PL D SI LHA+ LA+ HPT+ R A PP W E
Sbjct: 4 EILFLDNHLLVVAKPAGMLSQGDSTGDRDVANWAKAFLKREFNKPGNVFVGLVQRLDRPA---------SGVMVLARTSKAASRLTEQFRKR-SVEKVYLALVEGKLEGSGRLEDWL---FKTHDTETGTRVKRVSST-----------------------TSGAKKAVLEWRALATV----------------RGRTLVRVVLETGRPHQVRVQLGGIGHPIVGDLRY--------------------------------AAPVPLGDGHSIALHAAHLALDHPTQKDRR-RFTAAPPPAWGE 222
BLAST of mRNA_H-paniculata_contig1979.5039.1 vs. uniprot
Match: A0A800M4B4_9BACT (RluA family pseudouridine synthase n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A800M4B4_9BACT) HSP 1 Score: 151 bits (382), Expect = 6.870e-41 Identity = 107/296 (36.15%), Postives = 145/296 (48.99%), Query Frame = 0
Query: 9 VLHMDNQMLWINKPAGLLSQGDRTGDVDVLALSREYVRVTTNKPGEAFVAMVHRLDRPGKTTKIYALMSGVMCIARTSKAAARLSASFRDRDSVEKTYYAVVTGELSGSGTREDLLVPVFSSVNGAKGVRGPRMTVVRESVAAGAAEEGGSRSAGRAEAGTKGSQRAVLEWEAIHNLTSANAKLCHPTGGGADRPHTLVRIKLITGRKHQIRAQLAGMGHPIVGDVRYGGRSSVSYRGESRGSRNGKDRVEVMEEFETGSSGLSPLKDKSILLHASELAVPHPTRPGEAVRMRAPP 304
VL++DN +L + KPAG+LSQ D TGD+DV+ +++++R +KPG F +VHRLDRP + G M IARTSKAA+RL+ FR R + EK Y A+V G L GSG D L+ RG R+ VR+ GT G++RAV+ W + L + +LV + L TGR HQIR QL+G+GHPIVGD+RYG + + G+ RG I LHA+ L + HPT+ APP
Sbjct: 5 VLYLDNHLLVVAKPAGMLSQADDTGDLDVVTWAKDFLRREFDKPGNVFAGLVHRLDRP---------VGGAMVIARTSKAASRLAEQFRQR-TPEKRYLAMVEGRLDGSGRETDWLLKTRDPK------RGTRVKRVRQ--------------------GTDGAKRAVMTWTSRSVLGT----------------RSLVEVGLETGRAHQIRVQLSGLGHPIVGDLRYGAEAPL---GDGRG----------------------------IALHATHLTIEHPTKRDRRTFTSAPP 217
BLAST of mRNA_H-paniculata_contig1979.5039.1 vs. uniprot
Match: A0A848XZP8_9BACT (RNA pseudouridine synthase n=1 Tax=Rhodothermaceae bacterium TaxID=2026787 RepID=A0A848XZP8_9BACT) HSP 1 Score: 149 bits (376), Expect = 3.720e-40 Identity = 106/301 (35.22%), Postives = 144/301 (47.84%), Query Frame = 0
Query: 8 QVLHMDNQMLWINKPAGLLSQGDRTGDVDVLALSREYVRVTTNKPGEAFVAMVHRLDRPGKTTKIYALMSGVMCIARTSKAAARLSASFRDRDSVEKTYYAVVTGELSGSGTREDLLVPVFSSVNGAKGVRGPRMTVVRESVAAGAAEEGGSRSAGRAEAGTKGSQRAVLEWEAIHNLTSANAKLCHPTGGGADRPHTLVRIKLITGRKHQIRAQLAGMGHPIVGDVRYGGRSSVSYRGESRGSRNGKDRVEVMEEFETGSSGLSPLKDKSILLHASELAVPHPTRPGEAVRMRAPPPDCW 308
+VL++DN +L + KP GLL+Q DRTGD D+L + +++ +KPG F+ +VHRLDRP +SGVM +ARTSKAA RLS +FR+R VEK Y A+V G +SG+G RED L+ R+ +V G +RAVL W+A+ G + +LV +KL+TGR HQ+R QLA +G PI+GD RYG L +++ LHA LA HP R E + APPP W
Sbjct: 2 EVLYLDNHLLVVVKPPGLLAQADRTGDTDLLTQGKAFLKEKFDKPGNVFLGLVHRLDRP---------VSGVMVLARTSKAAGRLSKAFRERR-VEKRYLALVEGRMSGAGEREDYLLKEDG-----------RVRIVSADHPKG--------------------KRAVLRWQAL----------------GEEGRLSLVEVKLLTGRAHQVRVQLAALGTPILGDFRYG--------------------------------ATRELDGRNLALHAYRLAFEHPVR-REPLVFTAPPPVSW 212
BLAST of mRNA_H-paniculata_contig1979.5039.1 vs. uniprot
Match: A0A2H5XHX8_9BACT (Ribosomal large subunit pseudouridine synthase D n=2 Tax=Bacteria TaxID=2 RepID=A0A2H5XHX8_9BACT) HSP 1 Score: 145 bits (366), Expect = 1.860e-38 Identity = 113/304 (37.17%), Postives = 147/304 (48.36%), Query Frame = 0
Query: 5 DATQVLHMDNQMLWINKPAGLLSQGDRTGDVDVLALSREYVRVTTNKPGEAFVAMVHRLDRPGKTTKIYALMSGVMCIARTSKAAARLSASFRDRDSVEKTYYAVVTGELSGSGTREDLLVPVFSSVNGAKGVRGPRMTVVRESVAAGAAEEGGSRSAGRAEAGTKGSQRAVLEWEAIHNLTSANAKLCHPTGGGADRPHTLVRIKLITGRKHQIRAQLAGMGHPIVGDVRYGGRSSVSYRGESRGSRNGKDRVEVMEEFETGSSGLSPLKDKSILLHASELAVPHPTRPGEAVRMRAPPPDCW 308
+A VL+ DN +L INKPAGL SQGDR+G VL+L++ ++++ +KPG ++ +VHRLD P +SGVM +ARTSKAAARL FRDR +V+KTY A+V GEL G GT ED + P G M +V ES G +RAVL W+A L S N TL+R+ TGRKHQIR QLA G+PI+GD RY R + + LHA +L + HPT+ + APPP W
Sbjct: 9 EALPVLYYDNHLLVINKPAGLRSQGDRSGAPTVLSLAKAWLKMQCHKPGNVYLGLVHRLDAP---------VSGVMVLARTSKAAARLMQQFRDR-TVQKTYLALVEGELEGGGTWEDYVAPA-----------GESMRLVPESHPWG--------------------RRAVLHWQA---LLSRNGL-------------TLLRLVPETGRKHQIRVQLAFRGYPILGDRRYRSRRAFV--------------------------------PHQLALHAWQLQLTHPTQ-RIPMAWSAPPPVTW 222
BLAST of mRNA_H-paniculata_contig1979.5039.1 vs. uniprot
Match: A0A1M6P7L7_9BACT (Ribosomal large subunit pseudouridine synthase D n=1 Tax=Rhodothermus profundi TaxID=633813 RepID=A0A1M6P7L7_9BACT) HSP 1 Score: 144 bits (364), Expect = 3.590e-38 Identity = 110/300 (36.67%), Postives = 141/300 (47.00%), Query Frame = 0
Query: 9 VLHMDNQMLWINKPAGLLSQGDRTGDVDVLALSREYVRVTTNKPGEAFVAMVHRLDRPGKTTKIYALMSGVMCIARTSKAAARLSASFRDRDSVEKTYYAVVTGELSGSGTREDLLVPVFSSVNGAKGVRGPRMTVVRESVAAGAAEEGGSRSAGRAEAGTKGSQRAVLEWEAIHNLTSANAKLCHPTGGGADRPHTLVRIKLITGRKHQIRAQLAGMGHPIVGDVRYGGRSSVSYRGESRGSRNGKDRVEVMEEFETGSSGLSPLKDKSILLHASELAVPHPTRPGEAVRMRAPPPDCW 308
VL++DN +L +NKPAGL SQGDR+G VL+L + ++ NKPG ++ +VHRLD P +SGVM +ARTSKAAARL FR+R +VEK Y A+V GEL G G ED + P M +V A +RAVL WEA+ TLVR+ TGRKHQIR QLA G+P++GD RY R L+P + LHA +L+V HPTR E ++ AP P CW
Sbjct: 9 VLYLDNHLLVVNKPAGLRSQGDRSGAPTVLSLGKALIKERFNKPGNVYLGLVHRLDAP---------VSGVMVLARTSKAAARLMQQFRER-TVEKIYLALVEGELEGEGVWEDFIAPARD-----------HMRLVS--------------------ADHPWGKRAVLRWEALMTRNGL----------------TLVRLIPETGRKHQIRVQLAFRGYPVLGDRRYRARR-----------------------------WLAP---GQMALHAWKLSVTHPTR-RERMQWTAPVPSCW 218
BLAST of mRNA_H-paniculata_contig1979.5039.1 vs. uniprot
Match: A0A271J2Z8_9BACT (PseudoU_synth_2 domain-containing protein n=1 Tax=Rubrivirga marina TaxID=1196024 RepID=A0A271J2Z8_9BACT) HSP 1 Score: 141 bits (355), Expect = 5.890e-37 Identity = 105/302 (34.77%), Postives = 145/302 (48.01%), Query Frame = 0
Query: 10 LHMDNQMLWINKPAGLLSQGDRTGDVDVLALSREYVRVTTNKPGEAFVAMVHRLDRPGKTTKIYALMSGVMCIARTSKAAARLSASFRDRDSVEKTYYAVVTGELSGSGTREDLLVPVFSSVNGAKGVRGPRMTVVRESVAAGAAEEGGSRSAGRAEAGTKGSQRAVLEWEAIHNLTSANAKLCHPTGGGADRPHTLVRIKLITGRKHQIRAQLAGMGHPIVGDVRYGGRSSVSYRGESRGSRNGKDRVEVMEEFETGSSGLSPLKDKSILLHASELAVPHPTRPGEAVRMRAPPPDCWAEL 311
L++DN +L ++KP GLL+Q DRTGD D+++L++ Y++ +KPG FV +VHRLDRP SGVM +ARTSKAA+RLS FR R +K Y AVV G+ G + + + ++GG S G QRA L + + D +LV ++L+TGRKHQIRAQLA +G PI+GD RYG ++ + + RG + LHA L V HPT+ E V + APPP+ WA L
Sbjct: 4 LYLDNHLLAVSKPPGLLTQADRTGDPDLVSLAKAYLKERFDKPGNVFVGLVHRLDRPA---------SGVMMLARTSKAASRLSDQFRRRVP-QKRYLAVVEGDPGDGGAWTERVDAI---------------------------DKGGGGSVDVVPVGE--GQRAALRYRTL----------------ARDSARSLVEVELLTGRKHQIRAQLAELGAPILGDFRYGNQTPFA---DGRG----------------------------VALHAYRLVVEHPTK-REPVTVVAPPPEAWAGL 218
BLAST of mRNA_H-paniculata_contig1979.5039.1 vs. uniprot
Match: A0A7Y2GAW4_9BACT (RNA pseudouridine synthase n=1 Tax=Rhodothermales bacterium TaxID=2306054 RepID=A0A7Y2GAW4_9BACT) HSP 1 Score: 140 bits (354), Expect = 1.080e-36 Identity = 109/307 (35.50%), Postives = 141/307 (45.93%), Query Frame = 0
Query: 2 PSFDATQVLHMDNQMLWINKPAGLLSQGDRTGDVDVLALSREYVRVTTNKPGEAFVAMVHRLDRPGKTTKIYALMSGVMCIARTSKAAARLSASFRDRDSVEKTYYAVVTGELSGSGTREDLLVPVFSSVNGAKGVRGPRMTVVRESVAAGAAEEGGSRSAGRAEAGTKGSQRAVLEWEAIHNLTSANAKLCHPTGGGADRPHTLVRIKLITGRKHQIRAQLAGMGHPIVGDVRYGGRSSVSYRGESRGSRNGKDRVEVMEEFETGSSGLSPLKDKSILLHASELAVPHPTRPGEAVRMRAPPPDCW 308
P+ + VL+ DN +L + KPAG+ SQ DRTGD D+L + Y++ +KPG F+ + HRLDRP SGVM +ARTSKAA+RL F DRD VEK Y A+V G + G GT E G R VAA EEG +Q A L+WE + T+V ++L TGRKHQIR QLA +GHPIVGD+RYG EF+ +++ LH L + HPT G A+ +A PP W
Sbjct: 2 PTPFSEYVLYCDNHLLVVCKPAGMPSQRDRTGDPDLLTAGKGYLKEKFDKPGRVFLGLAHRLDRPA---------SGVMVLARTSKAASRLGRQFLDRD-VEKQYVALVEGSVVGQGTTE----------------AGYLKKSERGVVAASRGEEG--------------AQYAELDWEKVKETARG----------------TIVNVRLKTGRKHQIRHQLARIGHPIVGDMRYG----------------------ATREFD----------GRNLALHCYLLTIDHPTL-GHAMSWQALPPLSW 219
BLAST of mRNA_H-paniculata_contig1979.5039.1 vs. uniprot
Match: A0A3N1UFZ4_9DELT (23S rRNA pseudouridine1911/1915/1917 synthase n=1 Tax=Desulfosoma caldarium TaxID=610254 RepID=A0A3N1UFZ4_9DELT) HSP 1 Score: 139 bits (351), Expect = 6.680e-36 Identity = 109/300 (36.33%), Postives = 147/300 (49.00%), Query Frame = 0
Query: 9 VLHMDNQMLWINKPAGLLSQGDRTGDVDVLALSREYVRVTTNKPGEAFVAMVHRLDRPGKTTKIYALMSGVMCIARTSKAAARLSASFRDRDSVEKTYYAVVTGELSGSGTREDLLVPVFSSVNGAKGVRGPRMTVVRESVAAGAAEEGGSRSAGRAEAGTKGSQRAVLEWEAIHNLTSANAKLCHPTGGGADRPHTLVRIKLITGRKHQIRAQLAGMGHPIVGDVRYGGRSSVSYRGESRGSRNGKDRVEVMEEFETGSSGLSPLKDKSILLHASELAVPHPTRPGEAVRMRAPPPDCW 308
VLH+DN +L + KPAGLL QGD +GD+ +L L+R++++ KPG FV +VHRLDRP +SG++ +ARTSKAA+RLSA FR+ + +K Y AVV G S + + V+G ++R+ S+S T G+QRA L + + TL+ + L TGRKHQIRAQLA G PIVGDVRYG + + YR SI LHA +L +PHPT+ GEAV + P P W
Sbjct: 32 VLHVDNHLLAVYKPAGLLVQGDPSGDLSLLDLARKWIKERYKKPGNVFVGLVHRLDRP---------VSGLVLLARTSKAASRLSAVFRE-NRAQKIYLAVVEGRPSRA---------CATLVHG----------LIRQE----------SKSVAVLPVKTPGTQRAELHYRTV----------------AFSDQRTLLAVHLKTGRKHQIRAQLAHEGCPIVGDVRYGAPTPLPYR--------------------------------SIALHAWKLTLPHPTK-GEAVEISCPLPLNW 243 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1979.5039.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-paniculata_contig1979.5039.1 ID=prot_H-paniculata_contig1979.5039.1|Name=mRNA_H-paniculata_contig1979.5039.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=313bpback to top |