mRNA_H-paniculata_contig19773.5034.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig19773.5034.1
Unique NamemRNA_H-paniculata_contig19773.5034.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig19773.5034.1 vs. uniprot
Match: D7FNL8_ECTSI (Homoserine dehydrogenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNL8_ECTSI)

HSP 1 Score: 346 bits (887), Expect = 2.360e-115
Identity = 168/200 (84.00%), Postives = 186/200 (93.00%), Query Frame = 1
Query:    1 VPCQGISSLTKVDFEYAKMMRSTIKLLGTAMLSPDGDKLSVFVSPVMVPLKHPIASARGPGNIVSVESKNMGTSSFAGPGAGRYPTANSVVNDLVRLGTGKVGKPFPFDKEWELETDFTAGFYMRITCVDDLGIIKRVGELAAENGVSIHAILQNPIEDPSNVDFVVTTDPCRQSQIVGLSNSIGEETWAKNVPLILSLL 600
            + C+GISSLT VDFEYAKMM+STIKLLGTAM SPDG+KLSVFVSPV+VPL HPIASARG GNIVSV+SKNMGT+SF+GPGAGRYPTANSVVND+VRLGTGKVG PFPFDKEWELE+DFT+ FY+RITC DDLGII+RVGELAAENGVSIHAILQNPIED  NVDFVVTTDPC+QSQ+  LS+SIG+E WAK VPLIL+LL
Sbjct:  294 IQCKGISSLTSVDFEYAKMMKSTIKLLGTAMRSPDGEKLSVFVSPVLVPLSHPIASARGAGNIVSVDSKNMGTASFSGPGAGRYPTANSVVNDIVRLGTGKVGSPFPFDKEWELESDFTSAFYLRITCSDDLGIIQRVGELAAENGVSIHAILQNPIEDVDNVDFVVTTDPCKQSQVDELSSSIGQEKWAKGVPLILTLL 493          
BLAST of mRNA_H-paniculata_contig19773.5034.1 vs. uniprot
Match: A0A835ZAD6_9STRA (Homoserine dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAD6_9STRA)

HSP 1 Score: 290 bits (743), Expect = 2.000e-94
Identity = 142/200 (71.00%), Postives = 163/200 (81.50%), Query Frame = 1
Query:    1 VPCQGISSLTKVDFEYAKMMRSTIKLLGTAMLSPDGDKLSVFVSPVMVPLKHPIASARGPGNIVSVESKNMGTSSFAGPGAGRYPTANSVVNDLVRLGTGKVGKPFPFDKEWELETDFTAGFYMRITCVDDLGIIKRVGELAAENGVSIHAILQNPIEDPSNVDFVVTTDPCRQSQIVGLSNSIGEETWAKNVPLILSLL 600
            VPCQGIS L+  DFE+A+MMRSTIKLLGTAML+ DG KLSVFVSPV+VPL  PIA ARG GNIV V S+N+ T+S++GPGAGR+PTANSVV+D+VR+  G    PFP+DK+W  ETDFT  FY RITC D LGIIKRVGELA ENGVSIHAILQNPIED  NVDFVVTT+PCR SQ+    +SI +E WAKN PL +SLL
Sbjct:  230 VPCQGISQLSSADFEFARMMRSTIKLLGTAMLNADGSKLSVFVSPVVVPLTSPIAGARGAGNIVVVNSRNVDTTSYSGPGAGRFPTANSVVSDIVRIARGMATPPFPYDKDWTFETDFTGEFYTRITCKDALGIIKRVGELAEENGVSIHAILQNPIEDRDNVDFVVTTEPCRLSQVESFCSSIAKERWAKNKPLCMSLL 429          
BLAST of mRNA_H-paniculata_contig19773.5034.1 vs. uniprot
Match: W7TUB9_9STRA (Homoserine dehydrogenase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TUB9_9STRA)

HSP 1 Score: 232 bits (591), Expect = 1.410e-71
Identity = 111/200 (55.50%), Postives = 149/200 (74.50%), Query Frame = 1
Query:    1 VPCQGISSLTKVDFEYAKMMRSTIKLLGTAMLSPDGDKLSVFVSPVMVPLKHPIASARGPGNIVSVESKNMGTSSFAGPGAGRYPTANSVVNDLVRLGTGKVGKPFPFDKEWELETDFTAGFYMRITCVDDLGIIKRVGELAAENGVSIHAILQNPIEDPSNVDFVVTTDPCRQSQIVGLSNSIGEETWAKNVPLILSLL 600
            +P +GISS+  VDFEYA+++ +TIKLLG A LSPDG KLSV VSP +VP +HPIA   G  NIV++ S+N+ +SS+ GPGAGRYPTANS+V+DLVRL  G VG PFP D+   LE D+T+ FY+R+   D LG+I+ VGE+A  +GVSI+AILQNPI DP+++ FVVTT+P R SQ+   ++ I ++ + K  PL  + L
Sbjct:  225 IPTKGISSVASVDFEYARLLNATIKLLGMAQLSPDGKKLSVAVSPFIVPREHPIAGTNGSTNIVNISSRNLVSSSYIGPGAGRYPTANSIVSDLVRLARGLVGPPFPVDRAMPLEPDYTSRFYIRLRIRDQLGVIRVVGEIAERHGVSIYAILQNPISDPNDIHFVVTTEPARHSQVQAFADDIEKQDFTKGPPLFFAFL 424          
BLAST of mRNA_H-paniculata_contig19773.5034.1 vs. uniprot
Match: A0A7S2WAR1_9STRA (Homoserine dehydrogenase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WAR1_9STRA)

HSP 1 Score: 225 bits (573), Expect = 6.190e-69
Identity = 106/200 (53.00%), Postives = 148/200 (74.00%), Query Frame = 1
Query:    1 VPCQGISSLTKVDFEYAKMMRSTIKLLGTAMLSPDGDKLSVFVSPVMVPLKHPIASARGPGNIVSVESKNMGTSSFAGPGAGRYPTANSVVNDLVRLGTGKVGKPFPFDKEWELETDFTAGFYMRITCVDDLGIIKRVGELAAENGVSIHAILQNPIEDPSNVDFVVTTDPCRQSQIVGLSNSIGEETWAKNVPLILSLL 600
            +P  GIS +  VDFEYAK+M +T+KLLGTA LSP  + LSV+VSPV+VP  HP+ASARG  N+VSV S N+G+SS+ GPGAGR+PTANSVV+D++R+       PFP  +   LE D++A FY+RIT  D LGII  +G +AA+ GVSI ++LQNPI DP+ VDFVVTTD C++SQ+  +++ +  + +  + PL++ ++
Sbjct:  218 IPTAGISKIDAVDFEYAKLMNATVKLLGTARLSPSKESLSVYVSPVVVPQLHPVASARGATNVVSVASSNLGSSSYVGPGAGRFPTANSVVSDVLRVAMDTTTPPFPLQRTLPLEPDYSACFYVRITVKDQLGIIANIGAIAAKAGVSIFSVLQNPITDPAKVDFVVTTDQCKRSQVQAVADEVSAQLFTVSPPLVMPMV 417          
BLAST of mRNA_H-paniculata_contig19773.5034.1 vs. uniprot
Match: A0A7S1Z3Y2_TRICV (Homoserine dehydrogenase (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1Z3Y2_TRICV)

HSP 1 Score: 208 bits (529), Expect = 1.630e-63
Identity = 104/205 (50.73%), Postives = 146/205 (71.22%), Query Frame = 1
Query:    1 VPCQGISSLTKVDFEYAKMMRSTIKLLGTAM-LSPDGDK---LSVFVSPVMVPLKHPIASARGPGNIVSVESKNMGTSSFAGPGAGRYPTANSVVNDLVRLGTGKVGK-PFPFDKEWELETDFTAGFYMRITCVDDLGIIKRVGELAAENGVSIHAILQNPIEDPSNVDFVVTTDPCRQSQIVGLSNSIGEETWAKNVPLILSLL 600
            +PC GI+ +T VDFEYA+++  T+KL+GTA  LS  G++   LSV+V+P +VP  H +ASARG GN V+V+S N+G +S+ GPGAGRYPTA+SVV D+ R+  G     PFP +   EL+ D+T+ FY+RI+  D LGI++RVGE+A   GVSIH+ILQNPI+D    DFVVTT+ C+ SQ+ G+   +  E +A+  PL + +L
Sbjct:  108 IPCMGITGVTAVDFEYARLLGCTVKLVGTAARLSKYGERDGALSVYVAPKVVPNSHLLASARGCGNAVAVDSANLGVASYTGPGAGRYPTASSVVADVRRIADGLCPPDPFPLESSIELDNDYTSNFYVRISFADSLGIVRRVGEIAERRGVSIHSILQNPIDDRGAADFVVTTEACKLSQVTGMCEDVAGEDFARGPPLCMPML 312          
BLAST of mRNA_H-paniculata_contig19773.5034.1 vs. uniprot
Match: A0A6V1RNX4_HETAK (Homoserine dehydrogenase n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1RNX4_HETAK)

HSP 1 Score: 209 bits (531), Expect = 7.830e-62
Identity = 107/200 (53.50%), Postives = 141/200 (70.50%), Query Frame = 1
Query:    1 VPCQGISSLTKVDFEYAKMMRSTIKLLGTAMLSPDGDKLSVFVSPVMVPLKHPIASARGPGNIVSVESKNMGTSSFAGPGAGRYPTANSVVNDLVRLGTGKVGKPFPFDKEWELETDFTAGFYMRITCVDDLGIIKRVGELAAENGVSIHAILQNPIEDPSNVDFVVTTDPCRQSQIVGLSNSIGEETWAKNVPLILSLL 600
            +PC+GIS++  +DF+YAK M +TIKL G A  S +G +LSV+VSPV+VP  HP+ASAR   NIV V S NMG++S+ GPGAGRYPTANSVVND+VR   G  G  FP D E  +E D+ + FY+RI   D LG+++ VGELA ++GVSI AILQ PI DP+NVDFVVTT     S I   S  + ++ +    P++++LL
Sbjct:  301 IPCKGISAIQSIDFQYAKQMGATIKLAGVADASREG-QLSVYVSPVVVPRTHPLASARMATNIVEVTSDNMGSTSYVGPGAGRYPTANSVVNDVVRAARGLTGTAFPVDAEARIEGDYVSKFYVRIKIRDQLGVVRVVGELAEKHGVSIDAILQLPITDPNNVDFVVTTGQTAVSSIEAFSADVSKQGFTLESPVVMTLL 499          
BLAST of mRNA_H-paniculata_contig19773.5034.1 vs. uniprot
Match: A0A7S2KEY7_9STRA (Homoserine dehydrogenase n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KEY7_9STRA)

HSP 1 Score: 201 bits (511), Expect = 1.820e-59
Identity = 103/207 (49.76%), Postives = 145/207 (70.05%), Query Frame = 1
Query:    1 VPCQGISSLTKVDFEYAKMMRSTIKLLGTAM-LSPDGDK---LSVFVSPVMVPLKHPIASARGPGNIVSVESKNMGTSSFAGPGAGRYPTANSVVNDLVRLGTGKVGKPFPF---DKEWELETDFTAGFYMRITCVDDLGIIKRVGELAAENGVSIHAILQNPIEDPSNVDFVVTTDPCRQSQIVGLSNSIGEETWAKNVPLILSLL 600
            +PC GI+ ++ VDFEYAK++  TIKL+GTA  LS  G+    LSV+V+P +VP+ H +ASARG GN V+V S N+GT+S+ GPGAGRYPTA+SVV D+ R+  G    PFP        E++ D+T+ FY+RI+  D LGII+ VGELA  +GVSI+++LQNPI +    DFVVTT+ C+ SQ+V L + I ++ + +  PL + +L
Sbjct:  223 IPCSGITQISSVDFEYAKLLGCTIKLVGTAARLSEYGEHDGALSVYVTPKIVPMTHLLASARGSGNAVAVNSSNLGTASYTGPGAGRYPTASSVVADICRVADGSCSAPFPSVTSTSSIEIDNDYTSAFYIRISFQDGLGIIRSVGELAEAHGVSINSVLQNPIRNRMEADFVVTTESCKLSQVVSLCDDIAKQEYCRMPPLSMPIL 429          
BLAST of mRNA_H-paniculata_contig19773.5034.1 vs. uniprot
Match: D8LHG9_ECTSI (Homoserine dehydrogenase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHG9_ECTSI)

HSP 1 Score: 198 bits (503), Expect = 2.580e-58
Identity = 105/209 (50.24%), Postives = 138/209 (66.03%), Query Frame = 1
Query:    1 VPCQGISSLTKVDFEYAKMMRSTIKLLGTAMLSPDGDKLSVFVSPVMVPLKHPIASARGPGNIVSVESKNMGTSSFAGPGAGRYPTANSVVNDLVRL---GTGKVGKPFPFDKEWELETDFTAGFYMRITCVDDLGIIKRVGELAAENGVSIHAILQN------PIEDPSNVDFVVTTDPCRQSQIVGLSNSIGEETWAKNVPLILSLL 600
            VPC GIS+L+  DF  AKMM  TIKL+GTA L    DKL+VFVSPV+VPL  P+AS RGPGN+V V S+N+  S +AGPGAGRYPTANSVVND+VRL   G      PFP ++  ELE DF A FY+R+T  D LG++  VG +A+E GVS+H++L+         E+   V  VV TD C +SQ+    + +  +  A   P+++S+L
Sbjct:  226 VPCAGISNLSSTDFACAKMMGCTIKLVGTAALGESKDKLAVFVSPVLVPLGGPLASTRGPGNVVVVRSENLTESVYAGPGAGRYPTANSVVNDIVRLARLGAAGTPPPFPLERPLELEPDFEACFYVRVTAADGLGVLSAVGAIASEAGVSVHSVLRGGEGXXXXXEEAGVVSLVVKTDSCLRSQVGAFVDGLKGKKVATADPVVMSIL 434          
BLAST of mRNA_H-paniculata_contig19773.5034.1 vs. uniprot
Match: B7G7E3_PHATC (Homoserine dehydrogenase n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G7E3_PHATC)

HSP 1 Score: 194 bits (493), Expect = 8.510e-57
Identity = 106/210 (50.48%), Postives = 138/210 (65.71%), Query Frame = 1
Query:    1 VPCQGISSLTKVDFEYAKMMRSTIKLLGTA--MLSPDGDK-----LSVFVSPVMVPLKHPIASARGPGNIVSVESKNMGTSSFAGPGAGRYPTANSVVNDLVRLGTGKVG-KPFP--FDKEWELETDFTAGFYMRITCVDDLGIIKRVGELAAENGVSIHAILQNPIEDPSNVDFVVTTDPCRQSQIVGLSNSIGEETWAKNVPLILSLL 600
            +P  GIS++  VDFEYA ++ STIKL+GTA  +   DGD      LSV+VSPVMV  K  +AS RG GN + V S+NM   S+ GPGAGR+PTANSVV D+VR+  G+    PFP    +  ELE ++ + FY+RI   D LGII++ GELA  +GVSIHAILQNPI DP + DF VTTDPC  S +    N +  + + ++ PL + LL
Sbjct:  227 IPTAGISNIQAVDFEYAALLHSTIKLVGTARRLTGVDGDDANSSPLSVYVSPVMVSTKDMLASTRGSGNAIVVTSENMNACSYTGPGAGRFPTANSVVADIVRVANGQASVDPFPKVSPEPLELEDNYVSPFYVRIPFRDGLGIIRQTGELAERHGVSIHAILQNPIADPGSADFCVTTDPCPLSNVQAFCNDLAAQNFCRDPPLHMPLL 436          
BLAST of mRNA_H-paniculata_contig19773.5034.1 vs. uniprot
Match: A0A7S2R140_9STRA (Homoserine dehydrogenase n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R140_9STRA)

HSP 1 Score: 193 bits (490), Expect = 5.790e-56
Identity = 103/205 (50.24%), Postives = 141/205 (68.78%), Query Frame = 1
Query:    1 VPCQGISSLTKVDFEYAKMMRSTIKLLGTAM-LSPDGDK---LSVFVSPVMVPLKHPIASARGPGNIVSVESKNMGTSSFAGPGAGRYPTANSVVNDLVRLGTGKVG-KPFPFDKEWELETDFTAGFYMRITCVDDLGIIKRVGELAAENGVSIHAILQNPIEDPSNVDFVVTTDPCRQSQIVGLSNSIGEETWAKNVPLILSLL 600
            +PC GIS LT VDFEYAK++  TIKL+GTA  LS  G+    LSV+V+P +VP  H +AS RG GN V+V+S N+G +S+ GPGAGR+PTA+SVV D+ R+ +      PFP      L++D+T+ FY+RI+  D LGII+R+GEL+  +GVSI++ILQNPI+D    DFVVTT+ CR  QI  L   I  E + +  P+ + +L
Sbjct:  272 IPCLGISQLTSVDFEYAKLLGCTIKLVGTATRLSEYGEHDGALSVYVAPKVVPNSHLLASIRGSGNAVAVDSANLGIASYTGPGAGRFPTASSVVADICRVASNTASIDPFPLHSNIALDSDYTSEFYIRISFSDGLGIIRRIGELSETHGVSINSILQNPIKDKLMADFVVTTEECRLMQIKELCRDIANEDFVRCDPVFMPML 476          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig19773.5034.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FNL8_ECTSI2.360e-11584.00Homoserine dehydrogenase n=1 Tax=Ectocarpus silicu... [more]
A0A835ZAD6_9STRA2.000e-9471.00Homoserine dehydrogenase n=1 Tax=Tribonema minus T... [more]
W7TUB9_9STRA1.410e-7155.50Homoserine dehydrogenase n=2 Tax=Monodopsidaceae T... [more]
A0A7S2WAR1_9STRA6.190e-6953.00Homoserine dehydrogenase n=1 Tax=Rhizochromulina m... [more]
A0A7S1Z3Y2_TRICV1.630e-6350.73Homoserine dehydrogenase (Fragment) n=1 Tax=Triere... [more]
A0A6V1RNX4_HETAK7.830e-6253.50Homoserine dehydrogenase n=3 Tax=Heterosigma akash... [more]
A0A7S2KEY7_9STRA1.820e-5949.76Homoserine dehydrogenase n=1 Tax=Leptocylindrus da... [more]
D8LHG9_ECTSI2.580e-5850.24Homoserine dehydrogenase n=2 Tax=Ectocarpus TaxID=... [more]
B7G7E3_PHATC8.510e-5750.48Homoserine dehydrogenase n=2 Tax=Phaeodactylum tri... [more]
A0A7S2R140_9STRA5.790e-5650.24Homoserine dehydrogenase n=1 Tax=Eucampia antarcti... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig19773contigH-paniculata_contig19773:2425..4526 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score349.7
Seed ortholog evalue8.8e-94
Seed eggNOG ortholog2880.D7FNL8
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Homoserine dehydrogenase
EggNOG OGs2QT5B@2759,COG0460@1
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons5
Model size603
Cds size603
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig19773.5034.1prot_H-paniculata_contig19773.5034.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig19773 2425..4526 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929494.099652-CDS-H-paniculata_contig19773:2424..25091622929494.099652-CDS-H-paniculata_contig19773:2424..2509Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig19773 2425..2509 -
1691480886.1173074-CDS-H-paniculata_contig19773:2424..25091691480886.1173074-CDS-H-paniculata_contig19773:2424..2509Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig19773 2425..2509 -
1622929494.1152968-CDS-H-paniculata_contig19773:2878..30101622929494.1152968-CDS-H-paniculata_contig19773:2878..3010Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig19773 2879..3010 -
1691480886.1285684-CDS-H-paniculata_contig19773:2878..30101691480886.1285684-CDS-H-paniculata_contig19773:2878..3010Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig19773 2879..3010 -
1622929494.1312256-CDS-H-paniculata_contig19773:3197..32531622929494.1312256-CDS-H-paniculata_contig19773:3197..3253Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig19773 3198..3253 -
1691480886.1359973-CDS-H-paniculata_contig19773:3197..32531691480886.1359973-CDS-H-paniculata_contig19773:3197..3253Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig19773 3198..3253 -
1622929494.148229-CDS-H-paniculata_contig19773:3580..37031622929494.148229-CDS-H-paniculata_contig19773:3580..3703Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig19773 3581..3703 -
1691480886.1438205-CDS-H-paniculata_contig19773:3580..37031691480886.1438205-CDS-H-paniculata_contig19773:3580..3703Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig19773 3581..3703 -
1622929494.1614635-CDS-H-paniculata_contig19773:4319..45261622929494.1614635-CDS-H-paniculata_contig19773:4319..4526Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig19773 4320..4526 -
1691480886.151724-CDS-H-paniculata_contig19773:4319..45261691480886.151724-CDS-H-paniculata_contig19773:4319..4526Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig19773 4320..4526 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig19773.5034.1

>prot_H-paniculata_contig19773.5034.1 ID=prot_H-paniculata_contig19773.5034.1|Name=mRNA_H-paniculata_contig19773.5034.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=201bp
VPCQGISSLTKVDFEYAKMMRSTIKLLGTAMLSPDGDKLSVFVSPVMVPL
KHPIASARGPGNIVSVESKNMGTSSFAGPGAGRYPTANSVVNDLVRLGTG
KVGKPFPFDKEWELETDFTAGFYMRITCVDDLGIIKRVGELAAENGVSIH
AILQNPIEDPSNVDFVVTTDPCRQSQIVGLSNSIGEETWAKNVPLILSLL
*
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mRNA from alignment at H-paniculata_contig19773:2425..4526-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig19773.5034.1 ID=mRNA_H-paniculata_contig19773.5034.1|Name=mRNA_H-paniculata_contig19773.5034.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2102bp|location=Sequence derived from alignment at H-paniculata_contig19773:2425..4526- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GTGCCGTGCCAGGGCATCTCCAGCTTGACGAAGGTGGATTTTGAGTACGC CAAAATGATGCGTTCTACCATCAAGCTGCTCGGGACGGCTATGCTGTCGC CTGACGGCGACAAACTGTCCGTGTTTGTGTCCCCCGTCATGGTACCCCTC AAGCACCCCATTGCTTCCGCTAGGGGGCCGGGTAACATCGTCTCCGTAGA ATCCAAGGTACGAATAAACGAAAGGGCGAGGGTCTACCGTTGTCCCGCGT TGTCCTACACGACACCGAAAAGCATAAACTGTAAATTTGACCTTTTTCAT GTCATTGACTTCGTTAAACCTTTCAGGGTGACTAGGCTCTTGTCGGGTGA TGTCTTTGGCTTATTGAATGCTGCTTTTTCTCGCCTCGATTTCCTCATTT ATACGGGGCGAACCCTAATATGGCTCGCCCGAAACAGGCTCGCACGATAA TGTAAATATTGAAGGGTTATAGTACATCACTCACCCATATCATGTGTTGG CAAAAATAGGCCACTGTCCTCTGGTGTCCTGTCCAAACCACCCCTTTCGG GCATCGCTGTACTCATCAAATCAGCTGCCAACCAAGCTGGTGTACCGCTT AGTGTGTGCGTCTAGAAAATACTGTCTGTTGAGTCGCGAGCTCCATCTCG TGGAAGCTAAGGTCGGAAAACAGTTTATTAGGATCAGGCACATTCGCTTG AGCTTCCAACAGCGCCCGCATGACATAACTATACAATTTCGTTGCTCAGC AGGGGGCCACCTTTTGTTTGGTTATTCACCCAGCCGTCGCTTCGGCGATG TCACTGACCGTTTTGTTTTGCAGAACATGGGCACCTCGTCCTTCGCGGGA CCTGGGGCCGGGCGGTACCCCACGGCCAACTCGGTCGTCAATGATCTCGT GCGTCTTGGGACGGGCAAAGTCGGGAAGCCGTTCCCGTTCGACAAGGTGT GTATAAATGATGAATGTCTAGCGTGGGGCGGTGGGAATGCACATCGATTC ATTTTGATCACTACTCCATCACTCTGTCATACTACCAAAGAAGATGCGTG CGACAAGAGAGAAACGTACGTAGAGCTAGCTGTGCGCGCAACCCGTTAGT GGGCTGTTTCTCTTTGTATTGCGCCAAATTTGCGCCCCCATCTTGCCCTT GTAGAGCAATTTGTTTTTTCTCGTTTGACGCAGCTCCGTACGCTGATCTC CCCAGTCTTCATCTCCCGCTTTCTGCCGTTGCCCCCTTATGCGCTCGCTG GTTGTCGCCCCTGGCATATTAAGGAGTGGGAGCTGGAAACTGACTTCACG GCAGGGTTTTACATGCGCATCACATGCGTGTGAGTTCGCTGAAGACTGAC GTCCATTTTCTTGGCTGTGCTCCACCACCCTGAGTGCACTGAAAGGCCTA TGCCTTAGGGACGAGTCGGAACATCGCCGTGACGAATGTATCTCCCCGGA CTATTTTAGCAACCACGAGCCTGCTCTGTTCCGTGTTTTTCGTTCTCATT TTCAACACCCATGCAGAGACGACTTGGGGATCATCAAGCGGGTAGGTGAA TTGGCGGCGGAAAACGGGGTATCCATTCATGCCATCCTGCAGAATCCCAT CGAGGACCCCTCCAACGTAGACTTTGTCGTCACCACAGACCCTTGCAGGT GAGGACATTGTGGTGCGAAGCATGACCAAGCAGTCGTGGCACTTTGTATA TAGGCGGATTCGCTGAGAGAGATTAAGCGCCCGTGTCGGTGTTGTAGGGT ACCTATTCATTGCTTTTTTTGCTTTTTTTTCGCTTGAATATGATGAAACA CGACTAGGCACCCCGAGACCTGTATTACTCGATCATAATGCAGAGTCGAG CAGCTGACGAAATGCACAGGAAACTGGCCGGCTGCCACTAAACGAAGCCT CCCCGCATTTCTTTGATATCGCCTTCCTTGTCGGTGTGCATCGGCTAGAT AAACAAAATGTTATCGTTGTTTCGGTTTTCGTTCCCGCTCATGTCGTCTT GTCCCCCTTTTTTGCAGACAATCGCAGATCGTGGGTCTGTCTAACTCCAT CGGCGAGGAGACGTGGGCGAAAAACGTACCCTTGATTCTCTCCCTTCTCT AG
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Coding sequence (CDS) from alignment at H-paniculata_contig19773:2425..4526-

>mRNA_H-paniculata_contig19773.5034.1 ID=mRNA_H-paniculata_contig19773.5034.1|Name=mRNA_H-paniculata_contig19773.5034.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1206bp|location=Sequence derived from alignment at H-paniculata_contig19773:2425..4526- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GTGCCGTGCCAGGGCATCTCCAGCTTGACGAAGGTGGATTTTGAGTACGC
CAAAATGATGCGTTCTACCATCAAGCTGCTCGGGACGGCTATGCTGTCGC
CTGACGGCGACAAACTGTCCGTGTTTGTGTCCCCCGTCATGGTACCCCTC
AAGCACCCCATTGCTTCCGCTAGGGGGCCGGGTAACATCGTCTCCGTAGA
ATCCAAGGTGCCGTGCCAGGGCATCTCCAGCTTGACGAAGGTGGATTTTG
AGTACGCCAAAATGATGCGTTCTACCATCAAGCTGCTCGGGACGGCTATG
CTGTCGCCTGACGGCGACAAACTGTCCGTGTTTGTGTCCCCCGTCATGGT
ACCCCTCAAGCACCCCATTGCTTCCGCTAGGGGGCCGGGTAACATCGTCT
CCGTAGAATCCAAGAACATGGGCACCTCGTCCTTCGCGGGACCTGGGGCC
GGGCGGTACCCCACGGCCAACTCGGTCGTCAATGATCTCGTGCGTCTTGG
GACGGGCAAAGTCGGGAAGCCGTTCCCGTTCGACAAGAACATGGGCACCT
CGTCCTTCGCGGGACCTGGGGCCGGGCGGTACCCCACGGCCAACTCGGTC
GTCAATGATCTCGTGCGTCTTGGGACGGGCAAAGTCGGGAAGCCGTTCCC
GTTCGACAAGGAGTGGGAGCTGGAAACTGACTTCACGGCAGGGTTTTACA
TGCGCATCACATGCGTGAGTGGGAGCTGGAAACTGACTTCACGGCAGGGT
TTTACATGCGCATCACATGCGTAGACGACTTGGGGATCATCAAGCGGGTA
GGTGAATTGGCGGCGGAAAACGGGGTATCCATTCATGCCATCCTGCAGAA
TCCCATCGAGGACCCCTCCAACGTAGACTTTGTCGTCACCACAGACCCTT
GCAGAGACGACTTGGGGATCATCAAGCGGGTAGGTGAATTGGCGGCGGAA
AACGGGGTATCCATTCATGCCATCCTGCAGAATCCCATCGAGGACCCCTC
CAACGTAGACTTTGTCGTCACCACAGACCCTTGCAGACAATCGCAGATCG
TGGGTCTGTCTAACTCCATCGGCGAGGAGACGTGGGCGAAAAACGTACCC
TTGATTCTCTCCCTTCTCTAGACAATCGCAGATCGTGGGTCTGTCTAACT
CCATCGGCGAGGAGACGTGGGCGAAAAACGTACCCTTGATTCTCTCCCTT
CTCTAG
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