mRNA_H-paniculata_contig1974.5025.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig1974.5025.1
Unique NamemRNA_H-paniculata_contig1974.5025.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig1974.5025.1 vs. uniprot
Match: A0A6H5JC42_9PHAE (RING-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JC42_9PHAE)

HSP 1 Score: 270 bits (689), Expect = 8.140e-84
Identity = 139/205 (67.80%), Postives = 156/205 (76.10%), Query Frame = 2 
Query:  548 ALLPCDWRYFAASVFYITSVCCVFSMASVASGESDARNWAFVRWLFIASLIILSAIWFGRIVHLLTWRLS---QRRQRIPRGALEARLQLRHPGIELGRLRLLLVDRDFTGEDYQALLDLDENNEAPSRVGASEGEIRRNPSFLIREPAPDNVAKPRNCTICLYPFKPRERVRIIPCLHQFHTECIDPWLRQNAICPVCKFPAVG 1153
            +L+P   R F   +  I    CVFS+  V        NW  + W F  SL+++S     R+V+    R     +RRQRIPRGALEARLQL HPGIELGRLRLLLVDRDFTGEDYQALLDLDENN+ PS VGASEGEI+RNPSF+I EPA D+V KP+NC+ICLYPFKPRERVRIIPCLHQFHTECIDPWLRQNAICPVCKFPAVG
Sbjct:   40 SLIPLRSRRFVGLLLMI----CVFSLVQV-----GVLNWTLMAWGFFGSLLVVSLFRLVRLVNGYAIRSDTARRRRQRIPRGALEARLQLHHPGIELGRLRLLLVDRDFTGEDYQALLDLDENNDVPSTVGASEGEIKRNPSFVIPEPAADSVVKPKNCSICLYPFKPRERVRIIPCLHQFHTECIDPWLRQNAICPVCKFPAVG 235
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BLAST of mRNA_H-paniculata_contig1974.5025.1 vs. uniprot
Match: A0A836CGW1_9STRA (Ubiquitin-protein ligase/ zinc ion binding protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGW1_9STRA)

HSP 1 Score: 153 bits (386), Expect = 3.140e-39
Identity = 73/122 (59.84%), Postives = 92/122 (75.41%), Query Frame = 2 
Query:  791 EARLQLRHPGIELG-RLRLLLVDRDFTGEDYQALLDLDENNEAPSRVGASEGEIRRNPSFLIREPAPDNVAKPRNCTICLYPFKPRERVRIIPCLHQFHTECIDPWLRQNAICPVCKFPAVG 1153
            E+R+  RHP +  G RL LLL+DRDF G+DYQ LL+LD +N AP+ VGA+E EIRRNP F ++E     +A  R+C+ICL+ F   E VRI+PCLHQ+H+ECID WLR NA CP+CKFPAVG
Sbjct:  124 ESRMLARHPQLANGGRLALLLMDRDFDGDDYQMLLELDADNVAPAAVGATEAEIRRNPCFTVQESDAKQLA--RSCSICLHTFCAGEEVRIVPCLHQYHSECIDEWLRMNATCPICKFPAVG 243
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BLAST of mRNA_H-paniculata_contig1974.5025.1 vs. uniprot
Match: W7T4H0_9STRA (Zinc finger, RING-type n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T4H0_9STRA)

HSP 1 Score: 107 bits (268), Expect = 3.010e-23
Identity = 56/121 (46.28%), Postives = 77/121 (63.64%), Query Frame = 2 
Query:  785 ALEARLQLRHPGIELGRLRLLLVDRDFTGEDYQALLDLDENNE-APSRVGASEGEIRRNPSFLIREPAPDNVAKPRNCTICLYPFKPRERVRIIPCLHQFH-TECIDPWLRQNAICPVCKF 1141
            A+E  + L   G +  RL+L+L+DRDF+ EDY+ L  LDE+ + A   +GA++ E+ R P++++     D   K   C ICL  F   E VRI+PCLHQFH +EC DPWLR+   CPVCKF
Sbjct:   85 AVEEGIALSRRGTDSSRLQLMLMDRDFSSEDYEVLSRLDEDEQDACHLLGATDAELERLPTYIV-----DTETKLNKCFICLNDFLKGEVVRILPCLHQFHQSECCDPWLRRKMECPVCKF 200
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BLAST of mRNA_H-paniculata_contig1974.5025.1 vs. uniprot
Match: L1IY96_GUITC (RING-type domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1IY96_GUITC)

HSP 1 Score: 101 bits (251), Expect = 8.020e-22
Identity = 51/106 (48.11%), Postives = 65/106 (61.32%), Query Frame = 2 
Query:  821 IELGRLRLLLVDRDFTGEDYQALLDLDENNEAPSRVGASEGEIRRNPSFLIREPAPDNVAKPRNCTICLYPFKPRERVRIIPCLHQFHTECIDPWLRQNAICPVCK 1138
            I    LRL L++RDFT  DY+ALL LDE   A    GA++  I R P + + E      +K   CT+CL P    ++ RI+PCLHQFH +CID WLR N+ CPVCK
Sbjct:   22 ISQDHLRLSLINRDFTSNDYEALLSLDEA--AGRSRGANQDRIDRLPCYTVAE-----GSKAPPCTVCLDPLNVSDQARILPCLHQFHKDCIDRWLRDNSTCPVCK 120
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BLAST of mRNA_H-paniculata_contig1974.5025.1 vs. uniprot
Match: A0A6G0WUI5_9STRA (RING-type domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WUI5_9STRA)

HSP 1 Score: 102 bits (254), Expect = 2.170e-21
Identity = 51/108 (47.22%), Postives = 65/108 (60.19%), Query Frame = 2 
Query:  836 LRLLLVDRDFTGEDYQALLDLDENNEAPSRVGASEGEIRRNPSFLIREP--APDNVAKPRNCTICLYPFKPRERVRIIPCLHQFHTECIDPWLRQNAICPVCKFPAVG 1153
            + LLL DRDF   DY+ LL LDENN   S  GA++ EI R P   I E   +   V +   C+ICL       + R++PC H+FH  CIDPWL+  A CP+CKFPA+G
Sbjct:   92 INLLLTDRDFDSNDYERLLLLDENNVKKSH-GATDFEIDRLPVVTISESMLSKGGVEEDLKCSICLEELSVGSQARMVPCFHRFHPACIDPWLKDKAECPICKFPAIG 198
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BLAST of mRNA_H-paniculata_contig1974.5025.1 vs. uniprot
Match: H3GXJ4_PHYRM (RING-type domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GXJ4_PHYRM)

HSP 1 Score: 101 bits (252), Expect = 3.230e-21
Identity = 53/134 (39.55%), Postives = 83/134 (61.94%), Query Frame = 2 
Query:  752 LSQRRQRIPRGALEARLQLRHPGIELGRLRLLLVDRDFTGEDYQALLDLDENNEAPSRVGASEGEIRRNPSFLIREPAPDNVAKPRNCTICLYPFKPRERVRIIPCLHQFHTECIDPWLRQNAICPVCKFPAVG 1153
            +  ++QR PRG ++    L +  ++   L+LL+ +RDF   DY+ L+ L+  NE   R GAS  +I++ P   + E +    ++  +C +CL  F+   RVR++PC H+FH ECIDPWL++ A CPVCKFPA+ 
Sbjct:   59 MQNQQQRRPRGVMQMSRAL-YDQLDGEMLQLLMSNRDFDSNDYERLMRLEALNER-KREGASPHQIQQLPIVTVTE-SMLQASENASCAVCLSTFQLDGRVRMMPCFHRFHQECIDPWLQEKASCPVCKFPAIA 189
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BLAST of mRNA_H-paniculata_contig1974.5025.1 vs. uniprot
Match: W2R565_PHYPN (RING-type domain-containing protein n=10 Tax=Phytophthora TaxID=4783 RepID=W2R565_PHYPN)

HSP 1 Score: 100 bits (249), Expect = 6.890e-21
Identity = 51/136 (37.50%), Postives = 83/136 (61.03%), Query Frame = 2 
Query:  755 SQRRQRIPRGALEARLQLRHPGIELGRLRLLLVDRDFTGEDYQALLDLDENNEAPSRVGASEGEIRRNPSFLIREP---APDNVAKPRNCTICLYPFKPRERVRIIPCLHQFHTECIDPWLRQNAICPVCKFPAVG 1153
            +QRR++ PRG ++    L +  ++   L+LL+ +RDF   DY+ L+ L+  NE  +  GA+  +I++ P   + E    A +N      CT+CL  F+    VR++PC H+FH +CIDPWL++  +CP+CKFPA+ 
Sbjct:   53 NQRRRQAPRGVMQMSRAL-YEQLDGDMLQLLMSNRDFDSNDYERLMRLEALNERRNE-GATPQQIQQLPIVAVTESMLKASENAC----CTVCLSAFQVNSPVRMMPCFHRFHPQCIDPWLQEKGLCPICKFPAIA 182
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BLAST of mRNA_H-paniculata_contig1974.5025.1 vs. uniprot
Match: A0A485LC69_9STRA (Aste57867_17819 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LC69_9STRA)

HSP 1 Score: 100 bits (250), Expect = 1.030e-20
Identity = 50/111 (45.05%), Postives = 66/111 (59.46%), Query Frame = 2 
Query:  836 LRLLLVDRDFTGEDYQALLDLDENNEAPSRVGASEGEIRRNPSFLIREPAPDN-----VAKPRNCTICLYPFKPRERVRIIPCLHQFHTECIDPWLRQNAICPVCKFPAVG 1153
            + LLL DRDF   DY+ LL LDENN   S  GA++ EI R P   + E    +     V +   C+ICL       + R++PC H+FH +CIDPWL+  A CP+CKFPA+G
Sbjct:  102 INLLLTDRDFDSNDYEQLLMLDENNVKKSH-GATDVEIDRLPVVTVSESMLQSTNKGGVPEDLKCSICLEDLVVGSQARMVPCFHRFHPQCIDPWLKDKAECPICKFPAIG 211
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BLAST of mRNA_H-paniculata_contig1974.5025.1 vs. uniprot
Match: A0A225WZ07_9STRA (E3 ubiquitin-protein ligase n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WZ07_9STRA)

HSP 1 Score: 100 bits (248), Expect = 1.120e-20
Identity = 55/136 (40.44%), Postives = 83/136 (61.03%), Query Frame = 2 
Query:  755 SQRRQRIPRGALEARLQLRHPGIELGRLRLLLVDRDFTGEDYQALLDLDENNEAPSRVGASEGEIRRNPSFLIRE---PAPDNVAKPRNCTICLYPFKPRERVRIIPCLHQFHTECIDPWLRQNAICPVCKFPAVG 1153
            +QRRQ+ PRG ++    L +  ++   L+LL+ +RDF   DY+ L+ L+  NE  +  GA+  +IR+ P   + E    A +N      CT+CL  F+   +VR++PC H+FH ECIDPWL + A CP+CKFPA+ 
Sbjct:   61 NQRRQQ-PRGVMQMSRAL-YEQMDGDMLQLLMSNRDFDSNDYERLMRLEALNERRNE-GATPQQIRQLPIVSVTENMLEASENAC----CTVCLSAFQVDSQVRMMPCFHRFHPECIDPWLHEKATCPICKFPAIA 189
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BLAST of mRNA_H-paniculata_contig1974.5025.1 vs. uniprot
Match: G5AET2_PHYSP (RING-type domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=G5AET2_PHYSP)

HSP 1 Score: 99.4 bits (246), Expect = 2.200e-20
Identity = 53/136 (38.97%), Postives = 83/136 (61.03%), Query Frame = 2 
Query:  755 SQRRQRIPRGALEARLQLRHPGIELGRLRLLLVDRDFTGEDYQALLDLDENNEAPSRVGASEGEIRRNPSFLIRE---PAPDNVAKPRNCTICLYPFKPRERVRIIPCLHQFHTECIDPWLRQNAICPVCKFPAVG 1153
             Q+R++ PRG ++    L +  ++   L+LLL +RDF   DY+ L+ L+  NE     GA+  +I++ P   + E    A +N +    CT+CL  F+    VR++PC H+FH ECIDPWL++ A+CP+CKFPA+ 
Sbjct:   62 QQQRRQAPRGVMQMSRAL-YEQLDGEMLQLLLSNRDFDSNDYERLMRLETLNER-RHEGATPQQIQQLPVVAVTEGMLQASENAS----CTVCLSTFELGGCVRMMPCFHRFHPECIDPWLQEKALCPICKFPAIA 191
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1974.5025.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JC42_9PHAE8.140e-8467.80RING-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A836CGW1_9STRA3.140e-3959.84Ubiquitin-protein ligase/ zinc ion binding protein... [more]
W7T4H0_9STRA3.010e-2346.28Zinc finger, RING-type n=2 Tax=Nannochloropsis gad... [more]
L1IY96_GUITC8.020e-2248.11RING-type domain-containing protein n=1 Tax=Guilla... [more]
A0A6G0WUI5_9STRA2.170e-2147.22RING-type domain-containing protein n=1 Tax=Aphano... [more]
H3GXJ4_PHYRM3.230e-2139.55RING-type domain-containing protein n=1 Tax=Phytop... [more]
W2R565_PHYPN6.890e-2137.50RING-type domain-containing protein n=10 Tax=Phyto... [more]
A0A485LC69_9STRA1.030e-2045.05Aste57867_17819 protein n=1 Tax=Aphanomyces stella... [more]
A0A225WZ07_9STRA1.120e-2040.44E3 ubiquitin-protein ligase n=1 Tax=Phytophthora m... [more]
G5AET2_PHYSP2.200e-2038.97RING-type domain-containing protein n=4 Tax=Phytop... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1974contigH-paniculata_contig1974:14930..21042 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score275.0
Seed ortholog evalue3.4e-71
Seed eggNOG ortholog2880.D8LG18
KEGG koko:K19041
Hectar predicted targeting categorysignal anchor
EggNOG free text desc.ubiquitin-protein transferase activity
EggNOG OGsKOG0800@1,KOG0800@2759
Ec32 ortholog descriptionZinc finger, RING-type
Ec32 orthologEc-21_004940.1
EC2.3.2.27
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko04121
Exons7
Model size1680
Cds size750
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929492.6372132-UTR-H-paniculata_contig1974:14929..153351622929492.6372132-UTR-H-paniculata_contig1974:14929..15335Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1974 14930..15335 +
1691480885.3647273-UTR-H-paniculata_contig1974:14929..153351691480885.3647273-UTR-H-paniculata_contig1974:14929..15335Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1974 14930..15335 +
1622929492.814575-UTR-H-paniculata_contig1974:20518..210421622929492.814575-UTR-H-paniculata_contig1974:20518..21042Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1974 20519..21042 +
1691480885.4479516-UTR-H-paniculata_contig1974:20518..210421691480885.4479516-UTR-H-paniculata_contig1974:20518..21042Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1974 20519..21042 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929492.6511624-CDS-H-paniculata_contig1974:15335..155541622929492.6511624-CDS-H-paniculata_contig1974:15335..15554Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1974 15336..15554 +
1691480885.3747747-CDS-H-paniculata_contig1974:15335..155541691480885.3747747-CDS-H-paniculata_contig1974:15335..15554Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1974 15336..15554 +
1622929492.6704674-CDS-H-paniculata_contig1974:17639..177031622929492.6704674-CDS-H-paniculata_contig1974:17639..17703Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1974 17640..17703 +
1691480885.3830369-CDS-H-paniculata_contig1974:17639..177031691480885.3830369-CDS-H-paniculata_contig1974:17639..17703Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1974 17640..17703 +
1622929492.692026-CDS-H-paniculata_contig1974:18051..180981622929492.692026-CDS-H-paniculata_contig1974:18051..18098Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1974 18052..18098 +
1691480885.391976-CDS-H-paniculata_contig1974:18051..180981691480885.391976-CDS-H-paniculata_contig1974:18051..18098Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1974 18052..18098 +
1622929492.7112463-CDS-H-paniculata_contig1974:18481..186201622929492.7112463-CDS-H-paniculata_contig1974:18481..18620Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1974 18482..18620 +
1691480885.40982-CDS-H-paniculata_contig1974:18481..186201691480885.40982-CDS-H-paniculata_contig1974:18481..18620Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1974 18482..18620 +
1622929492.7364576-CDS-H-paniculata_contig1974:18908..190081622929492.7364576-CDS-H-paniculata_contig1974:18908..19008Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1974 18909..19008 +
1691480885.4219463-CDS-H-paniculata_contig1974:18908..190081691480885.4219463-CDS-H-paniculata_contig1974:18908..19008Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1974 18909..19008 +
1622929492.7778375-CDS-H-paniculata_contig1974:19236..193511622929492.7778375-CDS-H-paniculata_contig1974:19236..19351Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1974 19237..19351 +
1691480885.430329-CDS-H-paniculata_contig1974:19236..193511691480885.430329-CDS-H-paniculata_contig1974:19236..19351Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1974 19237..19351 +
1622929492.7997172-CDS-H-paniculata_contig1974:20452..205181622929492.7997172-CDS-H-paniculata_contig1974:20452..20518Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1974 20453..20518 +
1691480885.4386778-CDS-H-paniculata_contig1974:20452..205181691480885.4386778-CDS-H-paniculata_contig1974:20452..20518Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1974 20453..20518 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1974.5025.1prot_H-paniculata_contig1974.5025.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig1974 15336..20518 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig1974.5025.1

>prot_H-paniculata_contig1974.5025.1 ID=prot_H-paniculata_contig1974.5025.1|Name=mRNA_H-paniculata_contig1974.5025.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=250bp
MDEIMPAPTAGINATAMEEGEPSSINSAHAEEGRRRRVRSAQRRALRALL
PCDWRYFAASVFYITSVCCVFSMASVASGESDARNWAFVRWLFIASLIIL
SAIWFGRIVHLLTWRLSQRRQRIPRGALEARLQLRHPGIELGRLRLLLVD
RDFTGEDYQALLDLDENNEAPSRVGASEGEIRRNPSFLIREPAPDNVAKP
RNCTICLYPFKPRERVRIIPCLHQFHTECIDPWLRQNAICPVCKFPAVG*
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mRNA from alignment at H-paniculata_contig1974:14930..21042+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig1974.5025.1 ID=mRNA_H-paniculata_contig1974.5025.1|Name=mRNA_H-paniculata_contig1974.5025.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6113bp|location=Sequence derived from alignment at H-paniculata_contig1974:14930..21042+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATCTTCGACAGCACTTGAACGACGTACAAAAGGCAGGGTGTCTCGAGCGG
TGTATTCTCACTTCCCCGCACGCGAGGAAAATATCCATTGAAGGCTGCGG
TGAAGCTCCCAGGCTCTGCTGCTTGGGTCGTACGTATTGCCTCTTGAAAT
CGGCTATACTCGCTGCTCTTCGGGTTACTCCGCTATTTCTGATTTTAGAC
TAGACGTTCCTGTACTACAACATCCTACACCTGCACTGTCCCGTACTGTA
CTCACTGTACTCTACTGTACTGCACTGTCCGTACGTACATTTACTACACT
CTGAAAGAACAGAGAGTGGGTTGGTGGAACCGGTTATTCTCCCCACCCGG
AGCTCTAGGTCTATACACAGTCGGGCAGCGAAGCAGACTCCTGCAGGATA
TCCAGAATGGATGAGATAATGCCGGCTCCAACCGCTGGAATCAACGCGAC
TGCGATGGAAGAAGGGGAACCTTCAAGTATTAATAGTGCTCATGCCGAAG
AAGGGAGACGAAGGCGGGTTAGGTCTGCACAGAGGAGGGCGTTGCGAGCC
TTGCTGCCGTGCGACTGGCGATATTTCGCTGCAAGCGTGTTTTACATCAC
GTCTGTGTGCTGTGTCTTCTCCATGGTAAGCGATCTCGCATTTCTCTCGA
ACTGACGATTTGTGCTAACAGGGACTGGGGTGGGCACCCTACCACGTGTA
GGCAGTACGTGTAGAGGTACATGGTACATGTCTCGTGTTTTGCACAAATA
GCGATCTAAATTCAGATACATTCAAGGCCGTCGCCCAGTTATATATGTGT
ATGATCACGCACAGCTAGCTAGCTCTACTTGCATTACTAACACTACCAGT
TTCTGAAGCGTAAGATATTTCCTTAGTATCGCGAAGATTTTCCCATCCGA
ACAAATGTGACCGTCTGACTCCTGCAGGCTTGCAAAATCCACTTCGTTGC
GGAGTTTCTCGGTCATGTACACATCGCGGTTTACCTCTATCATTTTTACC
GATGGCGTTGGAGATGTGTAGCTTTGATTTTGTCGGGAAACGTGGAAATA
TATGATAAGCACAGGCCATCGCAAGTATAATATATGTAAGTATATACGCC
GTCCCAGTGTAATCTGGGATTGACGCTGAGACACAGCACAATTATTTTTG
AACCTGTGCCTTGAGTCTCACCTTTGCGTCCAAGGGACTGGACCGCTGGA
CCACAGTCAGTGCAGTGTACCGTACTCCTCTACGGTCCTATTGCGTCTTC
GTGGGATTCCCACTAGGCTGTACCTGTGGAGGAGAAAATTTGGCTGGTTT
GCGTGAAAAGAGTAGGAAAAAATGTTTTGGCTCTAGTCCTAAATGTCACG
TATATTGTCCGACATTTTCTTTTTCTCTTCGATTTTCTCTTCAATTTTCT
CTTCAATTTTCTCTTAAATCTTCTTCATTGCGATGGAAGGGCGATAAATA
CACACTGATACGGTTTTGGAGAAATCGAAAAATGTACATGTATCGGAAGT
GAACACCGTTAAAAAATGTGCGTTTGCTGCCCGTCGGGGTCAAGGCTACA
GCGGCAGGAGGTACGGTGTGCGAACGGGAAGACACCTCTGCCTGTTGCAC
TGCTGGGCGATTGGAGCAGCACGCGACGCTGCATTTTCACCAATACTGCG
GTAACAAGGGTTGGGTTCTTTGTTTCAGCATTCGGTCAAACAAACCTACT
AGTAGCTCATTATTCTGTCTTGTACACAAGAAACACATCGCGTCGTAATA
TGGCGGAAGCACTTATATACATACGAAAAGGATATTTCATTAATTTGCGT
ACGGCCGCGGATCTAAGAGAAGACGAAATACTGTTCCCTCGTTTGACCTT
ACTTCATGCTGTCTTCCTTTTTGAAAATACTCTCGCTAATCCATTATGGC
TGCCGCTGCGGGACGGTATCGTGGCACCTCAAGTACAACGCCAGACCCCT
AACTCTCGTCGCCAACAGCATATTGGTGTACAGCGACGCGCGTGATTTCA
CCACACTTGTGCTGTGGGAATGCAAGCACTCCTGTTTGAGAAAATATCGG
AGAATAAATCGGGCGTGTTTTCAAATGAGGGTGCGCTCTTAAAAGTGTGG
TGATGTTCGAAGGGTTCCATCGTAGGATTTAGGGAGGTTGCCCAGAAAAG
CAAACACCACAATGGACAGATCGAGTTCAGAAATATCAGACGTCAAGTCA
CAACAAAATAACATGTGAATGAAGTCTCCTTTTCGTTTGTACATAAATGC
TTCCGCCATATTACGAGGCGATGTGTTCCATGTTTACAAGACAGAAAAAC
GAGCTACTAGTAGGTTTGTTCGACCGAATGCTGAAACAAAGAACCCAACC
CTTGTTACCGCAGTATTGGTGAAAATGCAGCGTCGCGTGCTGCTCCAATC
GCCCAGCAGTGCAACAGGCAGAGGTGTCTTCCCGTTCGCACACCGTACCT
CCTGCCGCTGTAGCCTTGACCCCGACGGGCAGCAAACGCACATTTTTTTC
TGTTCGCACACGTTACGACCATCACAATCTCCATGCCGCCAGTATTTGTT
CCACTACATGGACACCCCACTCTAATCCAGAATGCACCGAGTGAAAATTG
CATGGATGACTTGGACCATATCGTGCCTTCTTGAGGTTTTAAGGGTTTCA
CGGTACAAATTGTCCGTACTGTTCCTTGTCGCCTCCGTTTCTTGACCAAT
TTGACCTCAGGCGAGTGTGGCATCTGGGGAATCTGACGCGCGCAACTGGG
CGTTTGTCAGATGGTTGTTCATAGGTGAATTTTGATGCCCTCTTGGCCGT
ACGTGGTAGTTTTTACGAGAATAGACTCACATCCTTTCTTCTCTAAGTTG
GACAATTAATGGGAGCTGTTGTATGGTCTCACGTAGCTCTTACAAGTACT
ACTTCGGACTAAATTGTAACAGCACATGAGCCGCAATGTTGGCTACAAAC
AGTCGTTGGAGGCGTACAGTTCAGTGTTCGGTATGTTTGGTGAATATCCT
CCAGTGACCTGAGGAACCGTGACCGCGCGCTCGGTGCTTGATCTCATCCT
GCGCACTTCCCCCTCAATTCCTGGTCCCCCCCCCCTTTGCTACGGTGCTG
CGACTGCGTGCCTCCCGATCAGCTTCTCTCATAATCCTAAGTGCTATCTG
GTTCGGGAGGATTGTCCATGTGAGTGCGCGCTGCCATTTAGGGGTCGACG
GCTACAGTAAATTAGTACCCACTGCTGTGGGAGCGATTTTGGTGTTCTTA
TGTGAAACTTGCCCTTAGAAGATGACATTCTGAAGGGAACCTTCATCTTG
GACCATTCGTCTCGGGCGGGTCTGGCGTTCCTCCCCTTCATTTTTTTTTT
GTTTGTTTTATGCGCTGAAACAGGCAGATGACTGTGGAGTTGCAATATAA
GCTGCAGCTGATAAACAGCAACCCCGGGACCTTTTTCGTAAGGCACGAAA
TACGAATTTCCCAGTTCGTCGCATATACGAAGTGGAGAATCCAGCGCTCC
TCTGACGACTGTCTTCGCCGTGCCGGCTCCCGCTCTATGCCCGTATATTC
AGCTCTTGACATGGAGATTATCGCAGCGAAGACAACGCATACCGCGTGGG
GCGCTCGAGGCGCGGTTGCAGTTACGCCATCCTGGCATCGAGCTTGGGAG
ATTGCGTCTCCTTCTTGTTGATCGAGACTTCACTGGTGAAGGTATGGTAT
CAATCGAAATCACACAATCCCTGTTCCCACCATGTTCTATTCCGTAGAGT
TGGCGGGCACCTCGAGCGGTGCGAATCCAGCATAACTGGGTCGCTTGATC
ACACCTCGATTTCATGCGGCAGGAAAGGGGCATGTTTCGTGTCGGCGTGA
CTTTCTCGTCACTTCAGCGTTGCGTTTCATGCCCCCCTGCCCTTGGTCTC
AAACCGATGCGTTTTTTGCTGTTCGTTGCCTCGTTCCCGAACAACTGTGG
TCTTTCCCTCTCTCCCTTTTTTTTATCAGACTACCAAGCGTTGCTGGATC
TGGACGAAAATAACGAGGCGCCCTCGAGGGTGGGAGCGAGTGAGGGGGAG
ATTAGGCGAAACCCTTCTTTCTTGATCAGGTGTGAGACAACAAACAACTG
CAACAGTCAGTGCTCTCGAGATTCGTTGGTTAGAAAATGTGCAACATTGG
TGTCCCCAGATGCTCAACGTTTTCGGGCATGGGACCGAATGGTGCAGGTT
GTGCCGTGTCGTCTGGAATACTCGACTGTCGGCACTTTTGCTCTGCTGTT
GTCGTCTAACGTATCGCTCTCCTTTGCCGTCGCGCCCTTGCCTCCGTGCC
CTGGCAGGGAACCTGCTCCCGACAATGTTGCAAAACCGAGGAATTGTACG
ATTTGCCTGTATCCGTTCAAACCGCGAGAGCGAGTGAGGATTATACCTTG
TCTGCACCAGTTCCATACAGAGGTGAGGTCTATCCCACTACATATGGGGA
TGAGGATGGTACGGCACGTAGACGTATGTATCCTGGTCGTATTCTGTTAA
AGCGGGTTGGCCTGTTGATATCTCTCGGTTCGAATCGTTACTAATTACAC
TCCTCCAATGGGGGGATGGTTCTGCATGCCTCTGGTTTTCAGAATATTTG
GCGTGTCCGTGACTCTATTGGGAGGAGATTTATATACACTTAAATTTTAC
GAGGGTAAGCCATTAGGATCATCAAGCTTGTCGTGTCTACAGCGAGGTGT
AGCTCATGCGTTTTTGTTTCGACCCCTCCATAAACGTTTCTCGTTTTTTC
GTGAAATCAATGAGCCATCACTCAGCAGTATACGTTGCTCCAGTTTTGGT
TGATGTGTATGGGCATGTTTGTTTTTTGTACTTGTATGAAAGGGTGTTAC
TTGGTACAAATTCATAGTATTGTTACTATGTTGTCGACGATTCTATCCTA
CCTGTTGTTGGAGTTGTCCTTAGCAAAGCGTGGTACATATTGTCAACCCC
CCCGCCCTCTTCGTTCGAAGATAAATGGGCTTTGTCTGCCTCTTGATCAT
GCTGAAGTATGTAGTTTCCCTCCGCGCCGTCCTTCGATCGGTCAAATTAC
CTATATGGTCTCATGTAGATCTCTCAGACCCCCCTCCCCACCCATTTGTT
CGAGGTTTAATGGAATTTGTCTGCCTTTTGACCGTGCTGAACTATGTAGT
TTTTCTCAGCGCTATCTTTCGATCGGCTTGATAGTCCAGATGGTCTCATT
TAGATCTCTCGGTCTCGCGGTCACTATGTGTGAAGATGGATAACAGTGGG
AACATATATGCGTTACAGGACTCATTTCAATGAGCCACACGCATACCATA
TGCAGCAGAGGGCACCCACGTTTGATGAAGGGGATACAAGCGATTTCACC
CCCTTTACGTTAAATTTTGGGGCTCGAAGAAGTCTGGGGTAGTGTTGTGT
CTGAACTGGGAGATACGCGCCATCCTGCACATAGTCGCGCATGAGAGCGA
AACGAAACACGAGAACTCTGACCGTGCCCCTACCCACCTCTGTCTTTGCT
CCTTTGCAACGTTCACTTGGCAGTGTATCGACCCATGGCTTCGGCAAAAC
GCGATTTGTCCAGTGTGCAAGTTTCCAGCGGTAGGATAGTGATGCAAAAA
CACGGCGATGATTTTGGGGCTATTGTTTGTTCTTGACTGCACTACTCTAG
TGTTAAGGTACACACGTTGGTAATATTCATCGCCGTGCAATATGATTTGC
TCGGCTTTGGAAACCGAAGACGGTGTGATATTGCTTTATAGCAGTAGAAG
GAGTATGAAGAGTAGCAAGTTGAAGTGAGTTGAGATTAGCCTTGTATACC
AAAATGTATCGTGTTTAGGCGCTTAATGTATCTGTTCTCTGTGTAACTGG
CGTTATGAGGTGTTGCCCTGACCTGTCCGATGGGACTGTTGATGCCGAGG
TTTTGTGTGTGCAGGAGTACATAGCGTCAATTATGTACATACGTATTCGT
TGTTTCGTCTTTTTCTTTCGCTGCCTGTAGAACATTACACAACGAGGATG
ACTAAAAATGACATTTTCAACGTTTCTCGTATCATAGGCCGGTGTTTTAT
ATTCCTGCCATGCTGTACACAATCAACGCGTTTGCTGTTTAGGCGGCGAA
AACAAGCGTGAGC
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Coding sequence (CDS) from alignment at H-paniculata_contig1974:14930..21042+

>mRNA_H-paniculata_contig1974.5025.1 ID=mRNA_H-paniculata_contig1974.5025.1|Name=mRNA_H-paniculata_contig1974.5025.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1500bp|location=Sequence derived from alignment at H-paniculata_contig1974:14930..21042+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGATGAGATAATGCCGGCTCCAACCGCTGGAATCAACGCGACTGCGAT
GGAAGAAGGGGAACCTTCAAGTATTAATAGTGCTCATGCCGAAGAAGGGA
GACGAAGGCGGGTTAGGTCTGCACAGAGGAGGGCGTTGCGAGCCTTGCTG
CCGTGCGACTGGCGATATTTCGCTGCAAGCGTGTTTTACATCACGTCTGT
GTGCTGTGTCTTCTCCATGATGGATGAGATAATGCCGGCTCCAACCGCTG
GAATCAACGCGACTGCGATGGAAGAAGGGGAACCTTCAAGTATTAATAGT
GCTCATGCCGAAGAAGGGAGACGAAGGCGGGTTAGGTCTGCACAGAGGAG
GGCGTTGCGAGCCTTGCTGCCGTGCGACTGGCGATATTTCGCTGCAAGCG
TGTTTTACATCACGTCTGTGTGCTGTGTCTTCTCCATGGCGAGTGTGGCA
TCTGGGGAATCTGACGCGCGCAACTGGGCGTTTGTCAGATGGTTGTTCAT
AGGCGAGTGTGGCATCTGGGGAATCTGACGCGCGCAACTGGGCGTTTGTC
AGATGGTTGTTCATAGCTTCTCTCATAATCCTAAGTGCTATCTGGTTCGG
GAGGATTGTCCATCTTCTCTCATAATCCTAAGTGCTATCTGGTTCGGGAG
GATTGTCCATCTCTTGACATGGAGATTATCGCAGCGAAGACAACGCATAC
CGCGTGGGGCGCTCGAGGCGCGGTTGCAGTTACGCCATCCTGGCATCGAG
CTTGGGAGATTGCGTCTCCTTCTTGTTGATCGAGACTTCACTGGTGAAGC
TCTTGACATGGAGATTATCGCAGCGAAGACAACGCATACCGCGTGGGGCG
CTCGAGGCGCGGTTGCAGTTACGCCATCCTGGCATCGAGCTTGGGAGATT
GCGTCTCCTTCTTGTTGATCGAGACTTCACTGGTGAAGACTACCAAGCGT
TGCTGGATCTGGACGAAAATAACGAGGCGCCCTCGAGGGTGGGAGCGAGT
GAGGGGGAGATTAGGCGAAACCCTTCTTTCTTGATCAGACTACCAAGCGT
TGCTGGATCTGGACGAAAATAACGAGGCGCCCTCGAGGGTGGGAGCGAGT
GAGGGGGAGATTAGGCGAAACCCTTCTTTCTTGATCAGGGAACCTGCTCC
CGACAATGTTGCAAAACCGAGGAATTGTACGATTTGCCTGTATCCGTTCA
AACCGCGAGAGCGAGTGAGGATTATACCTTGTCTGCACCAGTTCCATACA
GAGGGAACCTGCTCCCGACAATGTTGCAAAACCGAGGAATTGTACGATTT
GCCTGTATCCGTTCAAACCGCGAGAGCGAGTGAGGATTATACCTTGTCTG
CACCAGTTCCATACAGAGTGTATCGACCCATGGCTTCGGCAAAACGCGAT
TTGTCCAGTGTGCAAGTTTCCAGCGGTAGGATAGTGTATCGACCCATGGC
TTCGGCAAAACGCGATTTGTCCAGTGTGCAAGTTTCCAGCGGTAGGATAG
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