prot_H-paniculata_contig19714.5020.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig19714.5020.1
Unique Nameprot_H-paniculata_contig19714.5020.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length351
Homology
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BLAST of mRNA_H-paniculata_contig19714.5020.1 vs. uniprot
Match: A0A6H5LHH7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LHH7_9PHAE)

HSP 1 Score: 58.2 bits (139), Expect = 1.720e-5
Identity = 36/89 (40.45%), Postives = 41/89 (46.07%), Query Frame = 0 
Query:    1 MDRWPVRGEPKHGFPAGMLVEIRCLDHSKGPGGR--------------------------GEL------GTTVEAQAKLRGKYRLKAEP 57
            M+ WP  GEP++GFPAGM VE RCL+HS G  GR                          GE       GTT E Q  LR KYR+K  P
Sbjct: 1212 MEAWPAPGEPRYGFPAGMSVEARCLEHSVGAPGRKGAPAEAAAVQQLADADALPPGTISLGETAGGVVRGTTWEEQRDLRNKYRMKDRP 1300
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BLAST of mRNA_H-paniculata_contig19714.5020.1 vs. uniprot
Match: D7FV42_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV42_ECTSI)

HSP 1 Score: 57.4 bits (137), Expect = 2.990e-5
Identity = 42/115 (36.52%), Postives = 52/115 (45.22%), Query Frame = 0 
Query:    1 MDRWPVRGEPKHGFPAGMLVEIRCLDHSKGPGGR--------------------------GEL------GTTVEAQAKLRGKYRLKAEPKCKKPSAKRKKPAAKTTAEPKRGEAQ 83
            M  WP  GE ++GFPAGM VE RCL+HS G  GR                          GE       GTT E Q  LR KYR+K +P  +    K+KK  A+   E K+ E +
Sbjct: 1014 MGAWPAAGEARYGFPAGMSVEARCLEHSVGAPGRKGAPAEAAAVQQLADADALPPGTISLGETAGGVVRGTTCEEQRDLRNKYRIKFQPAWQVEGKKKKKTKAQLKREQKKAERE 1128
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig19714.5020.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5LHH7_9PHAE1.720e-540.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FV42_ECTSI2.990e-536.52Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig19714contigH-paniculata_contig19714:74..2767 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig19714.5020.1mRNA_H-paniculata_contig19714.5020.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig19714 2..2865 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig19714.5020.1 ID=prot_H-paniculata_contig19714.5020.1|Name=mRNA_H-paniculata_contig19714.5020.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=351bp
MDRWPVRGEPKHGFPAGMLVEIRCLDHSKGPGGRGELGTTVEAQAKLRGK
YRLKAEPKCKKPSAKRKKPAAKTTAEPKRGEAQVTKELEAAQVVAAAAAA
SQQSAPAATRKNNRKDGGATAVAAAAKPVAEVSRHGCPKAIGRVEQQHPP
LPPPSAGGDDNVGRNNRARRAGTIYGQGRWGVRARAGVEGKSQTLCKRRR
DGMSGADGNDGNPSCRDGGVSLPSYVSWAVTSQQRSFVQDNPSSQHPHKH
EPLWKPDRKRPRAGRADARPECRRACENVVRQCMGKGPLEGVARRVLDCG
RQDDRQRRGGVEATSSQRQPGEGAWETNFGILLTSLVGKENLETPTSARA
*
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