prot_H-paniculata_contig197.5013.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig197.5013.1
Unique Nameprot_H-paniculata_contig197.5013.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length319
Homology
BLAST of mRNA_H-paniculata_contig197.5013.1 vs. uniprot
Match: D7G4U5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4U5_ECTSI)

HSP 1 Score: 129 bits (325), Expect = 1.710e-31
Identity = 71/144 (49.31%), Postives = 87/144 (60.42%), Query Frame = 0
Query:  115 FSVFDWTLVTSSCVETWSWYWVIYNMAMLPFVDGWYRVEHTPPSEVATLAGFSGAKIEQAGQDADDTVLAMMNAMHPSQEVEDTGLVESESGGDEDAQLSS-SDSPYADFEVTWEDIASYPNGLLREMSDLAVRLGYDGAPGMA 257
            FS FDW  V SSCV+TW+WYWV+YN AML  VD WYRVE TP S++A +AGFS   I +A                         L ESES  D++A +     S    FEVTW +IAS+P GLL+E+SDLAV LGY+ APG+A
Sbjct:  176 FSDFDWARVASSCVQTWAWYWVVYNRAMLQGVDKWYRVEDTPASQIAAMAGFSSVTIAEA-------------------------LQESESAPDDEAGVGQVMTSNPTGFEVTWAEIASFPGGLLQEVSDLAVELGYEAAPGLA 294          
BLAST of mRNA_H-paniculata_contig197.5013.1 vs. uniprot
Match: A0A6H5JS08_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS08_9PHAE)

HSP 1 Score: 130 bits (326), Expect = 1.770e-30
Identity = 71/144 (49.31%), Postives = 87/144 (60.42%), Query Frame = 0
Query:  115 FSVFDWTLVTSSCVETWSWYWVIYNMAMLPFVDGWYRVEHTPPSEVATLAGFSGAKIEQAGQDADDTVLAMMNAMHPSQEVEDTGLVESESGGDEDAQLSS-SDSPYADFEVTWEDIASYPNGLLREMSDLAVRLGYDGAPGMA 257
            FS FDW  V +SCVETW+WYWV+YN AML  VD WYRVE TP S++A +AGFS   I ++                         L  SES  DE+A +     S    FEVTWE+IAS+P GLL+E+SDLAV LGY+ APG+A
Sbjct:  348 FSDFDWARVANSCVETWAWYWVVYNRAMLQGVDKWYRVEDTPASQIAAMAGFSSVTIAES-------------------------LQNSESAPDEEAGVGQVMTSNPTGFEVTWEEIASFPGGLLQEVSDLAVELGYEAAPGLA 466          
BLAST of mRNA_H-paniculata_contig197.5013.1 vs. uniprot
Match: A0A7S1SKM8_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1SKM8_9CHLO)

HSP 1 Score: 80.9 bits (198), Expect = 1.780e-13
Identity = 51/136 (37.50%), Postives = 69/136 (50.74%), Query Frame = 0
Query:  115 FSVFDWTLVTSSCVETWSWYWVIYNMAMLPFVDGWYRVEHTPPSEVATLAGFSGAKIEQAGQDADDTVLAMMNAMHPSQEVEDTGLVESESGGDEDAQLSSSDSPYADFEVTWEDIASYPNGLLREMSDLAVRLGY 250
            F  FDW  V +SC E W  YW++YN AMLP VDGWYRVEHTPP EVA   G         G +  ++  A++      QE E  G    E  G  + +    ++      V+W D+   P GL  ++++LA   GY
Sbjct:  263 FPAFDWDTV-ASCTEFWGHYWLLYNRAMLPHVDGWYRVEHTPPCEVARQGGLL-----TPGDERGESAAAVV--CRARQEGEGPG--HGERHGTVNRKNKKRET------VSWADVKGLPQGLGEQLAELAQSFGY 382          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig197.5013.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G4U5_ECTSI1.710e-3149.31Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JS08_9PHAE1.770e-3049.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S1SKM8_9CHLO1.780e-1337.50Hypothetical protein (Fragment) n=1 Tax=Tetraselmi... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig197contigH-paniculata_contig197:25821..31514 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig197.5013.1mRNA_H-paniculata_contig197.5013.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig197 25742..33403 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig197.5013.1 ID=prot_H-paniculata_contig197.5013.1|Name=mRNA_H-paniculata_contig197.5013.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=319bp
MDCSRARQQLAAITSLFPNKVVREHIGSTRARPPPPPTTTTTQDCVPNNA
GTGQEQDGNSRTTTTTNNNNNNNHNNSRSNDRGNINSSGTRKDTHSTFSG
DDSWRGDYGDDYDPFSVFDWTLVTSSCVETWSWYWVIYNMAMLPFVDGWY
RVEHTPPSEVATLAGFSGAKIEQAGQDADDTVLAMMNAMHPSQEVEDTGL
VESESGGDEDAQLSSSDSPYADFEVTWEDIASYPNGLLREMSDLAVRLGY
DGAPGMAPDPNESASDSCSDTAEAAIENEEEAEGAGGDGGGQRKKGFFRR
LFGFLGKKRNKSKRKQNQ*
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