prot_H-paniculata_contig1969.5009.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1969.5009.1
Unique Nameprot_H-paniculata_contig1969.5009.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length187
Homology
BLAST of mRNA_H-paniculata_contig1969.5009.1 vs. uniprot
Match: A0A7D9D5L2_PARCT (Uncharacterized protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9D5L2_PARCT)

HSP 1 Score: 112 bits (279), Expect = 1.480e-26
Identity = 64/190 (33.68%), Postives = 104/190 (54.74%), Query Frame = 0
Query:    3 DLGSLSCVLGIEVRRDRSNGVPTTVEE---KGEI--FAPESTDKPPEPKSLGAVLSDIRATVQESSCGRSGNSSEHRGMVVPLMYASTGTRPDIAYAAYQAARRMEDPCREDFSTCKRIYRDLSTVPDLGITFDGKSNGDGLEGFVDADWAEDVEGQKSTTGYVFELNRGAISWCSRKQELVTWSSTEAD 187
            D+G +  VLG+ +RRDR  G  T  +    +G +  F  E       P   G    ++      +      N++E++ ++  L Y +T TRPD+A A    ++ M  P +E +   KR+ R +    + G+ F+GKS    L G+ DADWA D++ ++ST+GYVF++N   +SWCS++Q  VT S+TEA+
Sbjct:   17 DMGEVKHVLGMVIRRDRRKGKMTISQSTYLQGILKRFGMEQCKPVSTPLEPGKHFQELPDDENPT------NTNEYQKLIGCLTYVTTATRPDLASAVGILSKFMSKPSKEHWHGAKRVLRYIKDTVNYGLVFEGKSTKCSLIGYSDADWANDLDTRRSTSGYVFQINGSTVSWCSKRQPCVTRSTTEAE 200          
BLAST of mRNA_H-paniculata_contig1969.5009.1 vs. uniprot
Match: A0A1S4AS91_TOBAC (uncharacterized mitochondrial protein AtMg00810-like n=1 Tax=Nicotiana tabacum TaxID=4097 RepID=A0A1S4AS91_TOBAC)

HSP 1 Score: 110 bits (276), Expect = 7.910e-26
Identity = 76/192 (39.58%), Postives = 107/192 (55.73%), Query Frame = 0
Query:    1 MKDLGSLSCVLGIEVRRDRSN---GVPTTVEEKGEIFAPESTDKPPEPKSLGAVLSDIRATVQESSCGRSGNSSEHRGMVVPLMYASTGTRPDIAYAAYQAARRMEDPCREDFSTCKRIYRDLSTVPDLGITF--DGKSNGDGLEGFVDADWAEDVEGQKSTTGYVFELNRGAISWCSRKQELVTWSSTEAD 187
            M DLG +   LG EV++  S         V+E  E F  +S +    P+ LG  L       +++S G+  +++ ++ +V  LMYA T TRP+I Y+    +R ME P        KRI+R L    D GI +  +GKS    L GF D+D+A D E +KST GYVF L  GA+SWCS+KQ +VT S+TEA+
Sbjct:   55 MSDLGLMHYFLGSEVKQSASGFFISQKKYVQETLERFRLQSCNSVTTPEELGLKL-------EKNSAGKQIDNTLYKQIVGCLMYA-TVTRPEIMYSVSLVSRYMEHPKETHLLAAKRIFRYLQGTIDYGILYKKEGKSE---LIGFTDSDFAGDKEDRKSTPGYVFMLGSGAVSWCSKKQPIVTSSTTEAE 235          
BLAST of mRNA_H-paniculata_contig1969.5009.1 vs. uniprot
Match: A0A6S7KSC5_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7KSC5_PARCT)

HSP 1 Score: 108 bits (271), Expect = 8.750e-26
Identity = 71/197 (36.04%), Postives = 103/197 (52.28%), Query Frame = 0
Query:    1 MKDLGSLSCVLGIEVRRDRSNGVPTTVEEKG----------EIFAPESTDKPPEPKSLGAVLSDIRATVQESSCGRSGNSSEHRGMVVPLMYASTGTRPDIAYAAYQAARRMEDPCREDFSTCKRIYRDLSTVPDLGITFDGKSNGDGLEGFVDADWAEDVEGQKSTTGYVFELNRGAISWCSRKQELVTWSSTEAD 187
            ++DLG +S +LG+ ++RDR +   T  + K           E   P ST  P EP      LSD              N  E++ ++  L Y +T TRPD+A A    ++ M  P +E +   KRI R +    + GITF  K     L G+ DADWA D E ++ST+GY+F+++   ISWCS+KQ  V+ SSTEA+
Sbjct:   55 VEDLGEVSHILGMLIKRDRDSRTLTISQSKYLEGVLKRFNMEECKPVST--PLEPGKQFHELSDDETPA---------NIHEYQKIIGCLTYVTTATRPDLAAAVGILSKYMTKPSQEHWKGVKRILRYIKGTLNFGITFQAKDQTCILTGYSDADWANDTETRRSTSGYIFQISGCTISWCSKKQSCVSRSSTEAE 240          
BLAST of mRNA_H-paniculata_contig1969.5009.1 vs. uniprot
Match: A0A060S825_PYCCI (CCHC-type domain-containing protein n=1 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060S825_PYCCI)

HSP 1 Score: 112 bits (280), Expect = 2.350e-25
Identity = 73/192 (38.02%), Postives = 104/192 (54.17%), Query Frame = 0
Query:    1 MKDLGSLSCVLGIEVRRDRSNGV-----PTTVEEKGEIFAPESTDKPPEPKSLGAVLSDIRATVQESSCGRSGNSSEHRGMVVPLMYASTGTRPDIAYAAYQAARRMEDPCREDFSTCKRIYRDLSTVPDLGITFDGKSNGDGLEGFVDADWAEDVEGQKSTTGYVFELNRGAISWCSRKQELVTWSSTEAD 187
            M DLG++  +LGIEV+RDR          T ++     F  E+ +    P   G VL+  ++           N   +R  V  LMYA  GTRPDIA+A    ++ M++P R  +   KR+ R L    +L + + G S+ DG++GF DADW    E + S +GYVF L+ GAISW S+KQ +V  SSTEA+
Sbjct: 1186 MSDLGAMRWILGIEVQRDRQARTIAISQRTYIDTVAARFNLETANPVSTPLQPGGVLTRSQSPSTPHQVADMSN-VPYREAVGSLMYAVMGTRPDIAFAVTTLSQFMQNPGRAHWEAVKRVIRYLVGTRELWLVY-GTSD-DGIQGFSDADWGSSTEHRHSISGYVFTLDGGAISWSSKKQNVVALSSTEAE 1374          
BLAST of mRNA_H-paniculata_contig1969.5009.1 vs. uniprot
Match: A0A5D6YB57_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YB57_9STRA)

HSP 1 Score: 109 bits (273), Expect = 6.520e-25
Identity = 72/194 (37.11%), Postives = 96/194 (49.48%), Query Frame = 0
Query:    1 MKDLGSLSCVLGIEVRRDRSNGVPTTVEEKG-----EIFAPESTDKPPEPKSLGAVLSDIRATVQESSCGRSGNSS--EHRGMVVPLMYASTGTRPDIAYAAYQAARRMEDPCREDFSTCKRIYRDLSTVPDLGITFDGKSNGDGLEGFVDADWAEDVEGQKSTTGYVFELNRGAISWCSRKQELVTWSSTEAD 187
            M DLG L   LG+EV RD  +G  +  + K        F  +       P+  G  L+       E  C          +R  V  +MY   GTRPD+A A    ++   DPC   +   KR+ R L   P  GI F G  +G+ L G+ DADWA D+E ++ST+GYVF LN G I+W S+KQ  V  SSTEA+
Sbjct:  217 MSDLGELKYCLGMEVERDDKSGDVSMRQTKFLHSVLAKFGMQDCKPVKTPQDPGLKLTKAMC---EGGCKHDDTMQGVPYRSAVGAVMYLMVGTRPDLAAAVGVLSQFAADPCPTHWQALKRVLRYLQATPTHGIRFAGSGDGE-LIGYSDADWAGDIETRRSTSGYVFVLNGGCITWRSKKQRTVALSSTEAE 406          
BLAST of mRNA_H-paniculata_contig1969.5009.1 vs. uniprot
Match: A0A7D9IUY0_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9IUY0_PARCT)

HSP 1 Score: 110 bits (275), Expect = 1.090e-24
Identity = 65/187 (34.76%), Postives = 102/187 (54.55%), Query Frame = 0
Query:    1 MKDLGSLSCVLGIEVRRDRSNGVPTTVEEKGEIFAPESTDKPPEPKSLGAVLSDIRATVQESSCGRSGNSSEHRGMVVPLMYASTGTRPDIAYAAYQAARRMEDPCREDFSTCKRIYRDLSTVPDLGITFDGKSNGDGLEGFVDADWAEDVEGQKSTTGYVFELNRGAISWCSRKQELVTWSSTEAD 187
            ++DLG +S +LG+ ++RDR +    T+ +   +          E K +   L   +   + S   R  N  E++ ++  L Y +T TRPD+A A    ++ M  P +E +   KRI R +    + GITF  K     L G+ DADWA D E ++ST+GY+F+++   ISWCS+KQ  V+ SSTEA+
Sbjct: 1061 VEDLGEVSHILGMLIKRDRDSRT-LTISQSKYLEGVLKRFNMEECKPVSTPLEPGKQFHELSDDERPANIHEYQKIIGCLTYVTTATRPDLAAAVGILSKYMTKPSQEHWKGVKRILRYIKGTLNFGITFQAKDQTCILTGYSDADWANDTETRRSTSGYIFQISGCTISWCSKKQSCVSRSSTEAE 1246          
BLAST of mRNA_H-paniculata_contig1969.5009.1 vs. uniprot
Match: A0A4Y1REE4_PRUDU (Transposable element protein n=1 Tax=Prunus dulcis TaxID=3755 RepID=A0A4Y1REE4_PRUDU)

HSP 1 Score: 107 bits (268), Expect = 3.430e-24
Identity = 76/196 (38.78%), Postives = 106/196 (54.08%), Query Frame = 0
Query:    1 MKDLGSLSCVLGIEVRRDRSNGV----PTTVEEKGEIFAPESTDKPPEPKSLGAVLSDIRATVQESSCGRSGNSSEHRGMVVPLMYASTGTRPDIAYAAYQAARRMEDPCREDFSTCKRIYRDLSTVPDLGI-----TFDGKSNGDGLEGFVDADWAEDVEGQKSTTGYVFELNRGAISWCSRKQELVTWSSTEAD 187
            M DLG +   LGIEV++  SNGV        EE  + F  E  +    P   G  L+       +   GR  +S+  + +V  LMY  T TRPD+ +A    +R ME P    + T KR+ R L    DLG+     T + K  GD L GF D+D+A D++ +KST+GYVF L+  A+SW S+KQ +VT S+TEA+
Sbjct:  107 MTDLGKMHYFLGIEVKQT-SNGVFIGQKKYAEEILKRFHMEDCNSVQNPIVPGTKLN-------KDVGGREVDSTHFKQIVGSLMYL-TATRPDLMFAVSLISRYMESPTELHYQTAKRVLRYLKGTTDLGLFYKKETINKKEAGDELMGFSDSDYAGDLDDRKSTSGYVFMLSSAAVSWSSKKQPVVTLSTTEAE 293          
BLAST of mRNA_H-paniculata_contig1969.5009.1 vs. uniprot
Match: A0A7D9KES8_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9KES8_PARCT)

HSP 1 Score: 108 bits (270), Expect = 4.570e-24
Identity = 70/192 (36.46%), Postives = 97/192 (50.52%), Query Frame = 0
Query:    1 MKDLGSLSCVLGIEV--RRDRSN---GVPTTVEEKGEIFAPESTDKPPEPKSLGAVLSDIRATVQESSCGRSGNSSEHRGMVVPLMYASTGTRPDIAYAAYQAARRMEDPCREDFSTCKRIYRDLSTVPDLGITFDGKSNGDGLEGFVDADWAEDVEGQKSTTGYVFELNRGAISWCSRKQELVTWSSTEAD 187
            MKD+G L   LG++V  + D      G     +   E F  ES+     P + G  L       Q        +   ++  V  L+Y ST TRPDIAYA    AR   DP  E +   KRI R L+   D+G+ +DG        G+ DADWA D++ +KST+GYVF+++  AISW S+KQ  V  S+ EA+
Sbjct:  205 MKDMGQLHYFLGVKVIPKPDSKEIWIGQEAYTKSVLERFGMESSKPASTPVNPGTKLKKAADDSQRV------DQVNYQCAVGHLLYLSTKTRPDIAYAVSDVARFSADPTEEHWIAVKRIMRYLNGTRDMGLLYDGSKTTTSCVGYSDADWAGDLDDRKSTSGYVFQISNAAISWRSKKQSCVALSTAEAE 390          
BLAST of mRNA_H-paniculata_contig1969.5009.1 vs. uniprot
Match: R7SJG1_DICSQ (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Dichomitus squalens (strain LYAD-421) TaxID=732165 RepID=R7SJG1_DICSQ)

HSP 1 Score: 106 bits (264), Expect = 8.940e-24
Identity = 72/194 (37.11%), Postives = 104/194 (53.61%), Query Frame = 0
Query:    1 MKDLGSLSCVLGIEVRRDRSNGVPTTVEE---KGEIFAPESTD-KP---PEPKSLGAVLSDIRATVQESSCGRSGNSSEHRGMVVPLMYASTGTRPDIAYAAYQAARRMEDPCREDFSTCKRIYRDLSTVPDLGITFDGKSNGDGLEGFVDADWAEDVEGQKSTTGYVFELNRGAISWCSRKQELVTWSSTEAD 187
            M DLG++   LG+ +RRDR++ +    +E   +  +   E  D KP   P P     V  D  A+  E SC        ++ ++  LMYA  GTRPDIA+A  + +R   +P  +     K I R L       I ++G SN DGL  + D+DWAED + + ST+G +F L  GAISW SR+Q  ++ SSTEA+
Sbjct:  116 MTDLGAVQRFLGLRIRRDRASRIVDIDQEDYVQSVLERFEMADCKPANTPLPAGAALVKYDGLASDAERSC--------YQSLIGSLMYAMLGTRPDIAFAVTRLSRYSANPSPDHMKYAKYILRYLQGTRTYRIRYNGASN-DGLIAYSDSDWAEDRDDRHSTSGTIFLLAGGAISWASRRQPTISLSSTEAE 300          
BLAST of mRNA_H-paniculata_contig1969.5009.1 vs. uniprot
Match: A0A4Y1QMM4_PRUDU (Transposable element protein (Fragment) n=1 Tax=Prunus dulcis TaxID=3755 RepID=A0A4Y1QMM4_PRUDU)

HSP 1 Score: 107 bits (268), Expect = 9.380e-24
Identity = 76/196 (38.78%), Postives = 106/196 (54.08%), Query Frame = 0
Query:    1 MKDLGSLSCVLGIEVRRDRSNGV----PTTVEEKGEIFAPESTDKPPEPKSLGAVLSDIRATVQESSCGRSGNSSEHRGMVVPLMYASTGTRPDIAYAAYQAARRMEDPCREDFSTCKRIYRDLSTVPDLGI-----TFDGKSNGDGLEGFVDADWAEDVEGQKSTTGYVFELNRGAISWCSRKQELVTWSSTEAD 187
            M DLG +   LGIEV++  SNGV        EE  + F  E  +    P   G  L+       +   GR  +S+  + +V  LMY  T TRPD+ +A    +R ME P    + T KR+ R L    DLG+     T + K  GD L GF D+D+A D++ +KST+GYVF L+  A+SW S+KQ +VT S+TEA+
Sbjct:  955 MTDLGKMHYFLGIEVKQT-SNGVFIGQKKYAEEILKRFHMEDCNSVQNPIVPGTKLN-------KDVGGREVDSTHFKQIVGSLMYL-TATRPDLMFAVSLISRYMESPTELHYQTAKRVLRYLKGTTDLGLFYKKETINKKEAGDELMGFSDSDYAGDLDDRKSTSGYVFMLSSAAVSWSSKKQPVVTLSTTEAE 1141          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1969.5009.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7D9D5L2_PARCT1.480e-2633.68Uncharacterized protein n=1 Tax=Paramuricea clavat... [more]
A0A1S4AS91_TOBAC7.910e-2639.58uncharacterized mitochondrial protein AtMg00810-li... [more]
A0A6S7KSC5_PARCT8.750e-2636.04Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A060S825_PYCCI2.350e-2538.02CCHC-type domain-containing protein n=1 Tax=Pycnop... [more]
A0A5D6YB57_9STRA6.520e-2537.11Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A7D9IUY0_PARCT1.090e-2434.76Retrovirus-related Pol poly from transposon TNT 1-... [more]
A0A4Y1REE4_PRUDU3.430e-2438.78Transposable element protein n=1 Tax=Prunus dulcis... [more]
A0A7D9KES8_PARCT4.570e-2436.46Retrovirus-related Pol poly from transposon TNT 1-... [more]
R7SJG1_DICSQ8.940e-2437.11Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A4Y1QMM4_PRUDU9.380e-2438.78Transposable element protein (Fragment) n=1 Tax=Pr... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR11439:SF275coord: 71..187
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 71..187

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1969contigH-paniculata_contig1969:2528..3160 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1969.5009.1mRNA_H-paniculata_contig1969.5009.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1969 2528..3409 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1969.5009.1 ID=prot_H-paniculata_contig1969.5009.1|Name=mRNA_H-paniculata_contig1969.5009.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=187bp
MKDLGSLSCVLGIEVRRDRSNGVPTTVEEKGEIFAPESTDKPPEPKSLGA
VLSDIRATVQESSCGRSGNSSEHRGMVVPLMYASTGTRPDIAYAAYQAAR
RMEDPCREDFSTCKRIYRDLSTVPDLGITFDGKSNGDGLEGFVDADWAED
VEGQKSTTGYVFELNRGAISWCSRKQELVTWSSTEAD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039537Retrotran_Ty1/copia-like