prot_H-paniculata_contig1967.5003.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1967.5003.1
Unique Nameprot_H-paniculata_contig1967.5003.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length393
Homology
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BLAST of mRNA_H-paniculata_contig1967.5003.1 vs. uniprot
Match: D7FMD4_ECTSI (Similar to TPR, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMD4_ECTSI)

HSP 1 Score: 75.5 bits (184), Expect = 1.440e-11
Identity = 38/53 (71.70%), Postives = 49/53 (92.45%), Query Frame = 0 
Query:  341 MAADAVPMDLSVDLNSLNDTELKVRMMNLERELEYVRSERDRNELYLKRILKE 393
            M A+ VP+DLSVDL+SL++TELK+R+M +ERELEYVRS+RDRN+LYL RIL+E
Sbjct:    1 MEAEPVPLDLSVDLDSLDETELKMRLMQMERELEYVRSDRDRNQLYLTRILRE 53
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1967.5003.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FMD4_ECTSI1.440e-1171.70Similar to TPR, partial n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 91..132
NoneNo IPR availableCOILSCoilCoilcoord: 292..319
NoneNo IPR availableCOILSCoilCoilcoord: 147..181
NoneNo IPR availableCOILSCoilCoilcoord: 186..234
NoneNo IPR availableCOILSCoilCoilcoord: 39..80

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1967contigH-paniculata_contig1967:4252..18801 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1967.5003.1mRNA_H-paniculata_contig1967.5003.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1967 4252..18803 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1967.5003.1 ID=prot_H-paniculata_contig1967.5003.1|Name=mRNA_H-paniculata_contig1967.5003.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=393bp
HLVFCPDSYRERSGVTMDDDVDQRIHDLENAHGSLEVQVRAKDASIRELE
ASNTDLKRRLEQTMADLQREKTERAAAQVKVDASVGFAADKEAALRTVDE
LRRQSKHQEDSFDALEKETEKLQAKVREAEQGRADAVDDAAAKAREASTV
IRRADSLQKQCTELERELDERTKALAEYRGQKSEELMQAMSELAAANRRV
DDQKTRARSAETAADALRVRLERTEADVKDMSDKCLADKMGLEKQLELQE
RLTGLQRMKAEQITVKVTTLQRGMDLLKKQLTMECQNTDKERQRANTVRD
KAKAVVDDLKAKLLEEEGNTKKAGAAAEAAVPAATGKDGAMAADAVPMDL
SVDLNSLNDTELKVRMMNLERELEYVRSERDRNELYLKRILKE
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