prot_H-paniculata_contig1966.5002.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1966.5002.1
Unique Nameprot_H-paniculata_contig1966.5002.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length700
Homology
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BLAST of mRNA_H-paniculata_contig1966.5002.1 vs. uniprot
Match: D7FRX1_ECTSI (SCAR-WAVE n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRX1_ECTSI)

HSP 1 Score: 456 bits (1172), Expect = 4.340e-148
Identity = 410/715 (57.34%), Postives = 468/715 (65.45%), Query Frame = 0 
Query:    1 MPLTMRPIPHALNLGAPEIYGQGSSGQGSQGTQVLEDVNMASMVGTLSQLGALATYAQDMFDGLFRTADSLANQVSSASTRCSRLMQALPEAERRTVEAIGGGTGIDDSAVVEAVKAERHKANQAESEAAAKVFLPEAMPRWLVERYHSPEVARVPDLHLIDAVISTEDKQLLRKDGLNSCALRYSNPQFFYQEWFRLELERQDKSVKEKXXXXXXXXXXXXXXXXXXXXXXXGEQSEEITRAARPQRKSLSDWRGKLSMA----GFGTDKAGIARSS----AGDVSSLVGKEKLVVQQQEAYGDKFYKQEEEFADTGYQVAPADAN----SGGNRPSAPQLGALTFEDFRRKPEASSNENRRLFQPNLTRAGQPGGGGAQPTPSIQPRPQRPPPPQVPAAEPGSSPTXXXXXXXXXXXXXXXXXXXAQGATYSASLGTLTGAPNPDIATHAAPPXXXXXXXXXXXXXXXXXXXXXXXXLTRHPSFQVPIGEAVPVPASVVDEAPLR-PSYEVWGAEDEGVQV---QGSPALPPPPPAQALPDQGPTSNNGWLSDVPPAPPLPPARLPVPPPPLQAPASQXGXXXIXXXXXXXXXXXXXXXAPQPPQAVAA-GGRPSIHNDLLSSITAGKTLRVVKPREPDPAGGAMDSXXXXXXXXXXXXXXXXXXXXXEEPSVGSSNPLLGGNPGINDILARRQFLEAESEXXXXXXXXDWED 698
            MPLTMRPIPHALNLG PEIYGQG SGQG+ GTQVLEDVNMASMVGTL+QLG LATYAQDMFDGLF+TAD L+ ++S+ASTRCS L+QALPEAE+RT EAIG GTGIDD+A VEA+KAER  A QAESEAA+KVF PEAMPRWLVERYHSPEVARVPDLHLIDAV+S E+K LL KDGL+SCALRYSNPQFFYQEW+RLELERQ+KSV+EKXXXXXXXXXXXXXXXXXXXX    E+ EE  RA RP RKSL DWRGKL++     G G+   G++R +    AGDVSSLVG++K+VVQ++EAY DKFY++EEE ADT YQ+AP+DA     SGG +    QLGALT EDF RK  ++S   R LF+P   R                               PGS   XXXXXXXXXXXXXXXXXXX                              XX XXXXXXXXXXXXXXXX       PS+Q PI        ++++E   R PSYE WG   E  Q     G+PA+ PP                             A+LP    P+Q  ASQ G   + XXXXXX       X            G  S+  DLL+SIT GK L+ V+ R    A      XX  XXXXXXXXXXXXXXXXX  P+V +SNPL GGNPGIN+ILARR++LEAES XXXXXXXX W+D
Sbjct:    1 MPLTMRPIPHALNLGDPEIYGQGPSGQGTPGTQVLEDVNMASMVGTLAQLGVLATYAQDMFDGLFQTADDLSKKISAASTRCSNLLQALPEAEKRTAEAIGSGTGIDDNAAVEAIKAERQHAKQAESEAASKVFHPEAMPRWLVERYHSPEVARVPDLHLIDAVLSHEEKSLLTKDGLDSCALRYSNPQFFYQEWYRLELERQEKSVREKXXXXXXXXXXXXXXXXXXXXAGV-EKDEERARAPRPARKSLGDWRGKLAVGAAGLGIGSXXXGVSRGASTRGAGDVSSLVGQDKVVVQKREAYSDKFYRKEEEEADTSYQIAPSDAGAAVPSGGQQ--LQQLGALTPEDFNRKLGSASEGGRLLFKPPSARGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----XXAXXXXXXXXXXXXXXXXTQPYAPRPSYQEPIVTPTLESEAMMEETHARRPSYESWGIPPEPAQNFEHGGAPAVAPPAXXXXXXX---------------------AQLP----PVQE-ASQFGQPPLPXXXXXXMPSMGHAXXXXXXXXXXXXSGGASMRGDLLASITNGKKLKKVE-RPAPVAXXXXXXXXNEXXXXXXXXXXXXXXXXXXAPAVETSNPLFGGNPGINEILARRKYLEAESXXXXXXXXXXWDD 681
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1966.5002.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FRX1_ECTSI4.340e-14857.34SCAR-WAVE n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 200..227
NoneNo IPR availableGENE3D1.20.58.1570coord: 111..253
e-value: 2.1E-6
score: 29.6
coord: 628..698
e-value: 3.8E-5
score: 25.5
NoneNo IPR availableGENE3D1.20.5.340coord: 1..93
e-value: 3.7E-6
score: 29.1
NoneNo IPR availablePANTHERPTHR12902:SF1MIP02973Pcoord: 1..228
IPR003124WH2 domainSMARTSM00246wh2_8coord: 633..650
e-value: 0.056
score: 22.6
coord: 601..618
e-value: 230.0
score: 6.0
IPR003124WH2 domainPFAMPF02205WH2coord: 632..655
e-value: 0.005
score: 16.6
IPR003124WH2 domainPROSITEPS51082WH2coord: 601..618
score: 6.431
IPR003124WH2 domainPROSITEPS51082WH2coord: 633..650
score: 8.883
IPR028288SCAR/WAVE familyPANTHERPTHR12902WASP-1coord: 1..228

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1966contigH-paniculata_contig1966:12698..20555 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1966.5002.1mRNA_H-paniculata_contig1966.5002.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1966 12590..21226 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1966.5002.1 ID=prot_H-paniculata_contig1966.5002.1|Name=mRNA_H-paniculata_contig1966.5002.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=700bp
MPLTMRPIPHALNLGAPEIYGQGSSGQGSQGTQVLEDVNMASMVGTLSQL
GALATYAQDMFDGLFRTADSLANQVSSASTRCSRLMQALPEAERRTVEAI
GGGTGIDDSAVVEAVKAERHKANQAESEAAAKVFLPEAMPRWLVERYHSP
EVARVPDLHLIDAVISTEDKQLLRKDGLNSCALRYSNPQFFYQEWFRLEL
ERQDKSVKEKKQKREERKRRKAAAKAAGAARAGGEQSEEITRAARPQRKS
LSDWRGKLSMAGFGTDKAGIARSSAGDVSSLVGKEKLVVQQQEAYGDKFY
KQEEEFADTGYQVAPADANSGGNRPSAPQLGALTFEDFRRKPEASSNENR
RLFQPNLTRAGQPGGGGAQPTPSIQPRPQRPPPPQVPAAEPGSSPTPPAP
PTSARSTMPQPPPPPAQGATYSASLGTLTGAPNPDIATHAAPPGPPPAQS
RPPPPRGAPPPPPPPPPLTRHPSFQVPIGEAVPVPASVVDEAPLRPSYEV
WGAEDEGVQVQGSPALPPPPPAQALPDQGPTSNNGWLSDVPPAPPLPPAR
LPVPPPPLQAPASQPGLPPIPPPLPPLLPEGQPPGAPQPPQAVAAGGRPS
IHNDLLSSITAGKTLRVVKPREPDPAGGAMDSSGNELLDAIKKGAKLNPV
KQAEEPSVGSSNPLLGGNPGINDILARRQFLEAESEDSDSDDDSDWEDD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003124WH2_dom
IPR028288SCAR/WAVE_fam