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Homology
BLAST of mRNA_H-paniculata_contig1966.5002.1 vs. uniprot
Match: D7FRX1_ECTSI (SCAR-WAVE n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRX1_ECTSI) HSP 1 Score: 456 bits (1174), Expect = 3.400e-145 Identity = 410/715 (57.34%), Postives = 468/715 (65.45%), Query Frame = 1
Query: 109 MPLTMRPIPHALNLGAPEIYGQGSSGQGSQGTQVLEDVNMASMVGTLSQLGALATYAQDMFDGLFRTADSLANQVSSASTRCSRLMQALPEAERRTVEAIGGGTGIDDSAVVEAVKAERHKANQAESEAAAKVFLPEAMPRWLVERYHSPEVARVPDLHLIDAVISTEDKQLLRKDGLNSCALRYSNPQFFYQEWFRLELERQDKSVKEKXXXXXXXXXXXXXXXXXXXXXXXGEQSEEITRAARPQRKSLSDWRGKLSMA----GFGTDKAGIARSS----AGDVSSLVGKEKLVVQQQEAYGDKFYKQEEEFADTGYQVAPADAN----SGGNRPSAPQLGALTFEDFRRKPEASSNENRRLFQPNLTRAGQPGGGGAQPTPSIQPRPQRPPPPQVPAAEPGSSPTXXXXXXXXXXXXXXXXXXXAQGATYSASLGTLTGAPNPDIATHAAPPXXXXXXXXXXXXXXXXXXXXXXXXLTRHPSFQVPIGEAVPVPASVVDEAPLR-PSYEVWGAEDEGVQV---QGSPALPPPPPAQALPDQGPTSNNGWLSDVPPAPPLPPARLPVPPPPLQAPASQXGXXXIXXXXXXXXXXXXXXXAPQPPQAVAA-GGRPSIHNDLLSSITAGKTLRVVKPREPDPAGGAMDSXXXXXXXXXXXXXXXXXXXXXEEPSVGSSNPLLGGNPGINDILARRQFLEAESEXXXXXXXXDWED 2202
MPLTMRPIPHALNLG PEIYGQG SGQG+ GTQVLEDVNMASMVGTL+QLG LATYAQDMFDGLF+TAD L+ ++S+ASTRCS L+QALPEAE+RT EAIG GTGIDD+A VEA+KAER A QAESEAA+KVF PEAMPRWLVERYHSPEVARVPDLHLIDAV+S E+K LL KDGL+SCALRYSNPQFFYQEW+RLELERQ+KSV+EKXXXXXXXXXXXXXXXXXXXX E+ EE RA RP RKSL DWRGKL++ G G+ G++R + AGDVSSLVG++K+VVQ++EAY DKFY++EEE ADT YQ+AP+DA SGG + QLGALT EDF RK ++S R LF+P R PGS XXXXXXXXXXXXXXXXXXX XX XXXXXXXXXXXXXXXX PS+Q PI ++++E R PSYE WG E Q G+PA+ PP A+LP P+Q ASQ G + XXXXXX X G S+ DLL+SIT GK L+ V+ R A XX XXXXXXXXXXXXXXXXX P+V +SNPL GGNPGIN+ILARR++LEAES XXXXXXXX W+D
Sbjct: 1 MPLTMRPIPHALNLGDPEIYGQGPSGQGTPGTQVLEDVNMASMVGTLAQLGVLATYAQDMFDGLFQTADDLSKKISAASTRCSNLLQALPEAEKRTAEAIGSGTGIDDNAAVEAIKAERQHAKQAESEAASKVFHPEAMPRWLVERYHSPEVARVPDLHLIDAVLSHEEKSLLTKDGLDSCALRYSNPQFFYQEWYRLELERQEKSVREKXXXXXXXXXXXXXXXXXXXXAGV-EKDEERARAPRPARKSLGDWRGKLAVGAAGLGIGSXXXGVSRGASTRGAGDVSSLVGQDKVVVQKREAYSDKFYRKEEEEADTSYQIAPSDAGAAVPSGGQQ--LQQLGALTPEDFNRKLGSASEGGRLLFKPPSARGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----XXAXXXXXXXXXXXXXXXXTQPYAPRPSYQEPIVTPTLESEAMMEETHARRPSYESWGIPPEPAQNFEHGGAPAVAPPAXXXXXXX---------------------AQLP----PVQE-ASQFGQPPLPXXXXXXMPSMGHAXXXXXXXXXXXXSGGASMRGDLLASITNGKKLKKVE-RPAPVAXXXXXXXXNEXXXXXXXXXXXXXXXXXXAPAVETSNPLFGGNPGINEILARRKYLEAESXXXXXXXXXXWDD 681
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 466.1 |
| Seed ortholog evalue | 2.9e-128 |
| Seed eggNOG ortholog | 2880.D7FRX1 |
| KEGG ko | ko:K05747,ko:K17277 |
| KEGG Pathway | ko04062,ko04144,ko04520,ko04530,ko04666,ko04810,ko05100,ko05130,ko05131,ko05132,ko05231,map04062,map04144,map04520,map04530,map04666,map04810,map05100,map05130,map05131,map05132,map05231 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000226,GO:0000768,GO:0001578,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005768,GO:0006928,GO:0006949,GO:0006996,GO:0007010,GO:0007017,GO:0007520,GO:0008064,GO:0008150,GO:0009653,GO:0009987,GO:0010638,GO:0012505,GO:0014902,GO:0016043,GO:0016477,GO:0017016,GO:0017048,GO:0019899,GO:0030027,GO:0030154,GO:0030832,GO:0030833,GO:0030838,GO:0031252,GO:0031267,GO:0031334,GO:0031410,GO:0031982,GO:0032271,GO:0032273,GO:0032502,GO:0032535,GO:0032956,GO:0032970,GO:0033043,GO:0040011,GO:0042692,GO:0042995,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043254,GO:0044087,GO:0044089,GO:0044424,GO:0044444,GO:0044464,GO:0048365,GO:0048518,GO:0048522,GO:0048646,GO:0048856,GO:0048869,GO:0048870,GO:0050789,GO:0050794,GO:0051020,GO:0051125,GO:0051127,GO:0051128,GO:0051130,GO:0051146,GO:0051179,GO:0051493,GO:0051495,GO:0051674,GO:0055037,GO:0061061,GO:0065007,GO:0065008,GO:0071840,GO:0090066,GO:0097708,GO:0110053,GO:0120025,GO:1902903,GO:1902905 |
| EggNOG free text desc. | positive regulation of Arp2/3 complex-mediated actin nucleation |
| EggNOG OGs | KOG3671@1,KOG3671@2759 |
| Ec32 ortholog description | SCAR-WAVE |
| Ec32 ortholog | Ec-03_003460.1 |
| COG Functional cat. | T |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko04131,ko04147,ko04812 |
| Exons | 14 |
| Model size | 2868 |
| Cds size | 2100 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1966.5002.1 >prot_H-paniculata_contig1966.5002.1 ID=prot_H-paniculata_contig1966.5002.1|Name=mRNA_H-paniculata_contig1966.5002.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=700bp
MPLTMRPIPHALNLGAPEIYGQGSSGQGSQGTQVLEDVNMASMVGTLSQL
GALATYAQDMFDGLFRTADSLANQVSSASTRCSRLMQALPEAERRTVEAI
GGGTGIDDSAVVEAVKAERHKANQAESEAAAKVFLPEAMPRWLVERYHSP
EVARVPDLHLIDAVISTEDKQLLRKDGLNSCALRYSNPQFFYQEWFRLEL
ERQDKSVKEKKQKREERKRRKAAAKAAGAARAGGEQSEEITRAARPQRKS
LSDWRGKLSMAGFGTDKAGIARSSAGDVSSLVGKEKLVVQQQEAYGDKFY
KQEEEFADTGYQVAPADANSGGNRPSAPQLGALTFEDFRRKPEASSNENR
RLFQPNLTRAGQPGGGGAQPTPSIQPRPQRPPPPQVPAAEPGSSPTPPAP
PTSARSTMPQPPPPPAQGATYSASLGTLTGAPNPDIATHAAPPGPPPAQS
RPPPPRGAPPPPPPPPPLTRHPSFQVPIGEAVPVPASVVDEAPLRPSYEV
WGAEDEGVQVQGSPALPPPPPAQALPDQGPTSNNGWLSDVPPAPPLPPAR
LPVPPPPLQAPASQPGLPPIPPPLPPLLPEGQPPGAPQPPQAVAAGGRPS
IHNDLLSSITAGKTLRVVKPREPDPAGGAMDSSGNELLDAIKKGAKLNPV
KQAEEPSVGSSNPLLGGNPGINDILARRQFLEAESEDSDSDDDSDWEDD* back to topmRNA from alignment at H-paniculata_contig1966:12590..21226+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig1966.5002.1 ID=mRNA_H-paniculata_contig1966.5002.1|Name=mRNA_H-paniculata_contig1966.5002.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=8637bp|location=Sequence derived from alignment at H-paniculata_contig1966:12590..21226+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
AGAACAGGGGAAAATAGCTGCAAATTTTCTGCAGACAGCACGTCAAGGGC
AGCAGGTCAAGACGCACACAACGGTGGCCGCCACCCCGCTGGGTGCGGTG
CAGGCAAGATGCCGCTCACCATGAGGCCGATTCCCCATGCCCTTAATCTT
GGAGCTCCAGAGATTTATGGCCAAGGTTCGTCTGGACAAGGGTCTCAAGG
CACGCAGGTTTTGGAGGACGTGAACATGGCGAGCATGGTCGGAACGTTAT
CACAGCTTGGAGCCCTTGCAACGGTAAGAACTGACTGTACATTTTACAGT
AGACAGGTTCCTGTCCAATCGATGATAGGATGTTGAACATCAAGTTTTGT
TCATTCTCTCTGTCTTAGCTTTTTTGAATTGCGCCACCCCATCCTGCAGC
CTTTGTGTTCACGTGCCTATACTCGGAGGTATTTACCTAATAGGGGGATG
GATGATGAACCTGGGGTGAACCAAGAAAGCTCTTCCAGACAGCATTATGT
ACTTTGACCACGTTTGTTTCGCCCAGCAACCTCTTCGTGATTCGATTTGA
ATGAATGGAAGCGCATGACCACATGGCCTTATGTAGAACTAGATAGCTCT
ACGCGAGCTGACCCGTTTTCTTATATACAGGTCGCTGTATCCAAACAGTC
ACGATACCGATCAGGTGTCAGGTTGTGTACATGCACTTCAAAAACAAAAA
CACTTGGATACAGCCATGGGGTTACAAGATAACATGTACGTCGGGGTTTA
CAGGCTTCGGTGCTAACGCAACCACCAAATCAATGCTAAACCTGGGAATG
GGGGAATCCGAATATATACGTGTCCATGATGTGCGAAATTTGCAGCAGAG
ACAGCCTACGTCTGGGCCTATAAAGCGTTGCTGGTGCCCGTCTTCATCTA
ATCCCCTAGTCGAGGAACAATACAAGCCAAATTATTCCTGTTACCATGTC
TTTCACGAGTGGTGACATGGATAGGAAGCTAGTGCTGTTTTGGCAGCAGC
AGAGTCAAGACAGCAATAGTCGGAGTTGACGAATGGTGCTGCACCTAGAC
TGCAGCAATATCAAACGATTACTGACAAACACTGAAGTGAGTGACTGTGC
ATAGGTGGGTGTCCACGCAAAGCTGCACAGCAGGACATGATATCAAACAA
ACCAGGCCCTTGTGGCGTTGTTCAGATATTCAGACATTCAGGCAGTCGCA
GGTACTCGGTGTAGAGTACGGAAATAGTTGGCATGATTTGCGCACAAGGA
CGTGAGCACTCCGCAGAAACGCAAAGCCGCTCAAGGCCGTACGCCAGGCC
ATGAAATCAAACCAACCACTACTCTCACGACGCCAAAACTATGACTATGA
CAACACAACAGTAGATACAAGTGGTGTATACATAATTCCCTTACTAGGTA
ATTTGTTATAAATAGTGCTCATGAGGATTAGTTCAAGAGTAGAGTGTGCC
TCACAAGTTGACTCATGTATTGGAGACAAGATGGCTTTGATAGACGGTGC
AGATGAAACGTTACAATTTACCTAAACTAATGTTCCTCCAGAAATTTGGA
TCGTGGCACGCCGGCATCATGGCATTAGGAGGCCGAAGCCCTGCCTCCGC
TCGTGATTTATCGTCGTCCTAAAACGACCCCCCCCCCCCCCCTAAGCTTA
TGCGGCGACACTGTCAAATCCATTTACGGTTCCGAAGCAGCATCAGGCAA
CGGAAGGTTTTCAAAAGTAAGACACATGAGCTTTGAGTTTATGTCGAGCG
TATGTTTCTGTATGCGCAAATTGTATTTTTGTGGTTTGCTAGTTTTGCTC
GTCGTACTGATGTTTTTTTTAAAAGAGACTACTAACACGTGTCTAAATAC
AGACCACTCTTATTGCGTGTAAGATACATTACCATAGTTTACGGATGAAT
TTGGCCAAAGTAAGGGAAGGTAGATGTAAGGGTTAACGAGGCCAGGTGAC
GCCTGCATAGGTAACCCGCTTAAGATCCAGAGGCACAGTGGGTCACTCAC
TGTATTGGATCATGACGATTACATGTAAGATCCGCTGAGGATTGTTTTTC
TGTATGCAGCTCATTGGCACCGTTGCTGTAATGTCGACCTTCATACGAAA
GGTAACACCACTGGAATTATGGATAACGATCGTAGTATGGCACCAGTACC
TGACGCTACTTGTTGCAATGACAAGCGATGATATGACGGTGTTTAGGTAG
TAGGGGAATTCCGTAGCAATGGCAATTAAGCAAAACCTACGTGAAGAGAA
CCTTTGGACTGTCTTTGCACAGCCCGTTCGAATGTCTGGAAATATTTTTC
TTCTTCAGCTATGAAGTCGACGAACAGCAGTTTTGGTACCATCCATTCCT
GCTGAGAATTTCAAGTGTGGCGTGGAAGGACAGGTCTGTTGACTTTGCTA
ATTGTCAGCAATACCTGTGAAATGCGAGATCCCACAAGAGTGCTCACGTG
AAAGTATTGCATTATTCTCCCGACCTGCAGTATGCACAGGATATGTTCGA
TGGCTTATTCAGAACCGCGGACAGCCTCGCCAACCAGGTTTCATCTGCGT
CAACGCGATGCTCTCGCCTAATGCAGGTGCGAACTTCAAAGGGGGGGGGG
TTGCTTTCGATCGTGCGTTTGTAAACCTTGCTCCTTGGAGGTATGTGAAG
CTTACAAACTAAAAGATTTACAAACACGTTCGCATGTGTCTGTATTCATC
AGGCACTCCCAGAGGCTGAGCGGCGAACGGTTGAAGCCATCGGTGGAGGA
ACGGGCATTGACGATAGCGCGGTCGTTGAGGCAGTAAAAGCAGAACGGCA
CAAAGCCAATCAGGTGACAGCTTTACCCAATTTCTGCTCTATTCCCGACT
GTCTCCAAAATTCTTTACGCAACTGCTTTCTTGAAGTGAAGGTTGCCGGA
TTCGCCCTCCCTCGTTAAAATTCCTGCTGATTTTGTGGTCGTGCGATGAC
AGCATATCACTGGTACCTTCCGTTTGTCTGGACTCAGGCTGAAAGCGAAG
CGGCGGCCAAAGTATTTCTTCCCGAGGCGATGCCACGGTGGTTGGTCGAG
AGATACCACAGCCCGGAGGTAATTCCACATGAACAGCTGCTACTGTTTGC
GGCGCATGTTGCATTACCCCTTTGTAGTACGTGTTACGTGCTACTGACGG
TTGCTATTCAGCAGTGGGTAAGACCGTTCGCTAAATTCCCGTTGTTTCTT
TGCGGCTTGTGATATATTTTTATGTTTAGACCACTTCTCATGGCAGGAGT
TTTTCCTATTTTTTTCTTCTTGGCCAATTTCGCTCCAAAAAACAAACTTT
ATACAAGTTATTTAGAAATATTTTCGAGAGACGGTGACCCCATTTCCTCT
AGATCTCCTGACACGACCGATGTAGGCAAAAGTTCCCCCCTGATGCTTTT
TTTTCGGGACAAATTTACCCAACCCGTCCCGCGATCGGGATGCTGGCAAA
TCACGACACACCAGGATGTAGCACCCACCAGTCCACCCCGCACATCACTC
GCCCAAAACATTGGATGCTGATTGTTACGTCTGTTGAAGATCACACGTTG
ATACGAACACAGCCAACGTAGACACATCGTGCCGATGCGATAGCCGTGGG
ACTGCAGCCTTGTAGGTTCATCTAGAGTCCTCATCGCTGGGCAGCGAAGG
CGACCTTCAGCTGCTGCTGCAAGGCTGCCCCATGCTGCCGCCGTTGTTAT
GGATGACGATGGCTACAACGATGACAATTCATAATCCATCCAGTCTGCAC
CTCGAAGCACGATTCGCGAAACCGGATGATAATATGGAGAAAGCGTGTGC
AGTTTTTGATGTGGAGAACAAGTGACCTATAGCCAAAAGGCCATCCCCAA
TATACGTGAAAAATAGTTGGCGTAGGTGGACAGCTCGCCTTGGTAGAACA
TGGATGATGTTTGGATGGAAGTGCATCTTCCTACTCTACCATCGATTTAT
TTCTGACTGATATTTTTATTCCGGGCTCGTCTAAAACTTCCACATAATTT
TTTTTCGTGTTTTTTTCCCCCGTCGAAAGTGACGGCCTAAAGAGAAACAC
ACTGGAAAAAATCCCTTCCATAAGAAGTGGTGTTGGCGATGACTCATGTT
GCCATTTCAGGGGATGGTAAAATAGAACTGCCCTCAATAACAACTGCTGC
TGGTGCCCAGGTTGCTAGGGTGCCTGATTTACATCTCATAGATGCTGTGA
TTTCGACTGAAGATAAGCAGCTGTTGAGGAAAGATGGGCTGAACAGCTGT
GCTCTGAGGTAAGCATGGGGTGTCACCCTGCAAGGAATATTCCTAATTAC
CGCACTGTGATTTCGAATATGACCCCCAAAGCGTTGTGCATGTGGGAGAG
TGAAATTCTCAGTCGAGAATATCAGAGGGCCCGTCAGGATTTCGCTTCGC
TATACATCGGATACCATGATTCAAGTAAGGTGGTCATGTTCGAGGGGAAA
GTAGATTGAAAGCTGGGCAACTCGGTTCGCCACTCCCGAACAATTTGTAC
ATACCCGGTATTCGGTGAAATAACCCGATGTAAGGCTGGGCAGTGATTAT
GCCGTTTTTTCCGACTGGTGACCAGCATAACCCCGATTGAGTCGGGTACG
CGACTCACTCATTGCATTATCGGCAACAGCGGTCGAAGATGTTTCGTCGA
ACGGTTCTATGGGCGTTCTATTTGGCGAAATATTGCCGAGAATATGGGGG
CACAACTACTGTACTTGAATATAGCTGAATGCCTTGTATTTCTCTGATAT
TGTTCTGATTTTTGGGGCCCTTCTTGCTTCCCTATGCGTCGCAGATATTC
CAACCCACAATTCTTCTATCAGGAGTGGTTTCGACTAGAGTTGGAACGTC
AGGTATGTCTGGTTCAACTATGAGTTCTATCTTGTTAGTGTAACAGGACA
CTTTCACAGATGTACGTTCTGAAATGTACGTTTTCGGTTTGTTGTATATA
TGCATATTGTAAAATAGAAATATGACGAAACTGCAAATGGGTGGGTAGTA
TACGCTTCGGTCTCAAACTGAAACTTTTCGTACCAACTAAAATTCGTTTT
TAATTCAGGATAAATCTGTGAAAGAAAAGAAGCAGAAAAGGGAAGAGCGC
AAACGTCGTAAAGCAGCGGCTAAAGCCGCCGGGGCAGCACGGGCGGGGGG
GGAGCAGAGTGAGGAGATCACTCGTGCTGCGCGTCCACAAAGGAAGTCAT
TGTCAGACTGGAGGGGCAAGCTCAGCATGGCAGGGTTCGGCACTGACAAG
GCTGGCATTGCGAGAAGTTCCGCTGGAGACGTCTCGTCGCTTGTCGGGAA
AGAAAAGTTGGTAGTGCAACAACAAGAGGCATACGGCGATAAGTTCTACA
AACAGGTGCAGATAGCATTCGAACCTCGTCCCGGGGGCTGGTAAAGCGAG
TCGATAAATGCTACGTCACACAGCACCATTTACCCGACGAGAAATGTGCC
TTGTGGCGGCGCTGCAAGGCGTGTGAGTGCGTATTCAACATCGTAGACCC
CACCCCCGCGGGGAGTATTTTTTCAACTTTATTGGGTATAGGTGGTGCTT
TGTGATGTACTACGAGCGGTTTACTTCGCTGGTTGTTGTATCTCTTTTGT
TACGGATCAGGAGGAAGAGTTCGCAGACACTGGGTACCAGGTTGCTCCAG
CAGATGCTAACTCGGGTGGTAATAGGCCTTCCGCTCCGCAGCTGGGTGCC
CTTACCTTCGAAGATTTCCGCAGAAAGCCCGAGGCTTCCTCAAATGAGAA
CAGGTTGGGGCATGAACGTTCAGTGACGAATTGAATCTACAACGGCAGGT
TCACCAACCATTTTCTGATCGCTTCTGTTGTTGCTTCTACAACGTTGACG
AGCAGGAAGCGTCTTGGCTTGAATCGAATGGCAATGCTTGATACTGCACT
TTTTTTGTCGGGCTTCTGTCAAACGCAATTTGCTCACTCACTCCGACGCA
CGTGCAGGCGACTTTTCCAGCCAAACTTGACACGAGCTGGCCAACCTGGA
GGTGGTGGAGCGCAGCCCACGCCATCCATACAGCCACGACCACAAAGACC
TCCGCCACCCCAAGTTCCAGCCGCAGAGCCAGGATCATCGCCAACCCCGC
CTGCCCCGCCCACATCTGCCCGATCAACAATGCCACAACCACCACCGCCG
CCGGCCCAAGGAGCAACTTACTCGGCGTCACTTGGTACGCTAACGGGAGC
CCCCAACCCAGACATTGCAACACACGCGGCTCCGCCAGGGCCACCGCCCG
CGCAATCTCGACCCCCTCCTCCACGAGGAGCACCACCTCCTCCACCACCG
CCGCCCCCCCTAACCCGCCACCCCTCTTTTCAGGTGCCAATTGGAGAGGC
CGTGCCTGTTCCTGCTTCCGTGGTGGACGAGGCACCTCTTCGTCCGAGTT
ACGAGGTTTGGGGGGCTGAGGATGAAGGGGTACAAGTACAAGGCAGCCCT
GCACTGCCACCACCACCGCCAGCTCAAGCCCTACCTGATCAGGTTTAGCA
AGTTTAATAATAAATCGTTTTGCCATAATGTGCAGTATGCGGGACAACGT
AAACCAAAAAAATGACCAAAATCATCAACTCAACGTCGCAAATTAAAACC
CAATCATCGCTCATACTAATTGCCTTACAATCCGTGTATTTAAATTGTCG
CCAAATTGAAGCAGGTCGGCAAAAAGTAAGACCAAATGTTAAACGGCAAG
GTAGATTGAAGATACAGTTATTTACTGCTATCGGCGTAAGCTGTAAATCT
TCTTCACAGTTGAACTATTTGTGTTGAAAAGAGTCCTCAACGCATATGCA
AGGCCGTTGAAAGTGGTGTGATGAGAACAGATTACTGCCCTCCTCTGGGT
AGTAGTAAACGTATTTCTTCGTCTTTCTTTGTCTGCTGCCCTATCACTTC
CGATTTGTTCAGGGTCCGACGTCAAATAATGGTTGGCTGTCCGATGTGCC
TCCAGCGCCTCCTCTACCACCAGCCCGTCTGCCTGTGCCTCCTCCGGTAT
GAGCGTGTCCCATGATTGTATGAATGTTTCGGTTGTGTCACTTGTGGAAG
CCAATAGAGACCGGAAGAGTTAAAACTGGACATGGGGAGCAGAACTATTT
TAATATCTGTTTTGTTGTAGTAAATGACAATTTTCATATTCCCGTTCCAT
TCATGACCATCTTGGCGCCGTGCACCACCAGCCCCTGCAGGCCCCCGCAT
CGCAACCTGGTCTCCCACCAATACCTCCGCCACTACCACCGCTGCTCCCT
GAAGGCCAGCCACCAGGCGCGCCCCAGCCTCCACAGGCTGTTGCCGCGGG
GGGTCGACCCTCGATCCACAATGACCTCTTGTCCAGCATCACTGCAGGCA
AGACTTTACGGGTAGTGAAACCAAGGGAGCCGGACCCTGCTGGTGGTGCA
ATGGATAGTAGCGGCAATGAGCTTCTGGATGCCATCAAGTAAGTCAGTCC
TAGGATCTTGACCAATGATGATAGTTAGGTATACGTGTGTGTCTGTATGA
CGTTAACCGTGCAAGTGCTCAAGCCTGCTTCCTCTTTCGCCTGTTGTGCA
GGAAGGGTGCTAAGCTGAACCCTGTAAAGCAAGCAGAGGAACCGTCAGTT
GGAAGCAGTAATCCTCTCTTGGGCGGTAACCCCGGTATCAACGATATCCT
CGCAAGGTGAGAGTTTATTTAGTGTGTGCACTATTTTCCGGATCGTTTGT
GGAGTACATGCGCTCTGATACGGTCGAAGTATACAACCGTTAATCCGTTT
GCACATCCAGAGCTACGAGTCAGATAGCTCTATCGCCTGCCTTGAACTGT
ATTGGCGTGCGTGTTCCATGGAAACAAACAGAAGGTTGACTTGAAACTCA
CCAATTCATCTATGTGATCAACATCGCATTCCATGTGCAACTCTAGGCGC
CAATTCTTGGAAGCGGAGAGTGAAGATTCGGATAGCGATGACGATTCTGA
CTGGGAGGATGATTGAAGTGTGCTCTCATGTGACGAGATGCAATCCAGAC
GCACCAGACGAGCGGAACGTTTACGACATTCAAGCGGAGAATACAGGGGG
GGGCGGTGCATCATCGATATCCGTCTTCCGTATTTTAGAGGGTGTACAAA
ACCGTCGAGACTATCGCCGAATCTAAACCTTCCCGAGAGATGGTGTTGTT
GATCTTCGAATAGTAACGTTTATACCAATAGCTCGCCGATGAATCACTTG
GCTTGGAAACGGAGGCCTTCAACATGAGAACATAGACGCAGGAACACTGA
ACTACCCATATGATACGAACCAATTCGTTACGCAATGCAATTATGAGGTC
CCTTGCGATCATGTGAGCCCTCTGGAGTGCGCGGCGTGCCGTGATTGCTC
ATGCGAATGCTTTCATCAATGTCTGCCTGTTGGCGTTTCTACCAGATGAT
TTGAGTGTGTATGAAACGTCAAACTGTAGATCATGTACGGAGCACCCTCT
TCAGAGAAGGATGCTGTGTGGCGTGATTGCGTCGTTGAGAACGCGGGCGC
TTGCGCTTGCCCACTTCTCCCACGTTCCGTCTGCCTACGAAGTTCTTTTC
CGCCGTCTATCTCTTCGTTCCTCCGGACTGATCCGTACGTGATTTACTTG
TGAGCATCTTCCCACCCGCGAAGACAGTGGTCGAGTG back to topCoding sequence (CDS) from alignment at H-paniculata_contig1966:12590..21226+ >mRNA_H-paniculata_contig1966.5002.1 ID=mRNA_H-paniculata_contig1966.5002.1|Name=mRNA_H-paniculata_contig1966.5002.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=4200bp|location=Sequence derived from alignment at H-paniculata_contig1966:12590..21226+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCCGCTCACCATGAGGCCGATTCCCCATGCCCTTAATCTTGGAGCTCC
AGAGATTTATGGCCAAGGTTCGTCTGGACAAGGGTCTCAAGGCACGCAGG
TTTTGGAGGACGTGAACATGGCGAGCATGGTCGGAACGTTATCACAGCTT
GGAGCCCTTGCAACGATGCCGCTCACCATGAGGCCGATTCCCCATGCCCT
TAATCTTGGAGCTCCAGAGATTTATGGCCAAGGTTCGTCTGGACAAGGGT
CTCAAGGCACGCAGGTTTTGGAGGACGTGAACATGGCGAGCATGGTCGGA
ACGTTATCACAGCTTGGAGCCCTTGCAACGTATGCACAGGATATGTTCGA
TGGCTTATTCAGAACCGCGGACAGCCTCGCCAACCAGGTTTCATCTGCGT
CAACGCGATGCTCTCGCCTAATGCAGTATGCACAGGATATGTTCGATGGC
TTATTCAGAACCGCGGACAGCCTCGCCAACCAGGTTTCATCTGCGTCAAC
GCGATGCTCTCGCCTAATGCAGGCACTCCCAGAGGCTGAGCGGCGAACGG
TTGAAGCCATCGGTGGAGGAACGGGCATTGACGATAGCGCGGTCGTTGAG
GCAGTAAAAGCAGAACGGCACAAAGCCAATCAGGCACTCCCAGAGGCTGA
GCGGCGAACGGTTGAAGCCATCGGTGGAGGAACGGGCATTGACGATAGCG
CGGTCGTTGAGGCAGTAAAAGCAGAACGGCACAAAGCCAATCAGGCTGAA
AGCGAAGCGGCGGCCAAAGTATTTCTTCCCGAGGCGATGCCACGGTGGTT
GGTCGAGAGATACCACAGCCCGGAGGCTGAAAGCGAAGCGGCGGCCAAAG
TATTTCTTCCCGAGGCGATGCCACGGTGGTTGGTCGAGAGATACCACAGC
CCGGAGGTTGCTAGGGTGCCTGATTTACATCTCATAGATGCTGTGATTTC
GACTGAAGATAAGCAGCTGTTGAGGAAAGATGGGCTGAACAGCTGTGCTC
TGAGGTTGCTAGGGTGCCTGATTTACATCTCATAGATGCTGTGATTTCGA
CTGAAGATAAGCAGCTGTTGAGGAAAGATGGGCTGAACAGCTGTGCTCTG
AGATATTCCAACCCACAATTCTTCTATCAGGAGTGGTTTCGACTAGAGTT
GGAACGTCAGATATTCCAACCCACAATTCTTCTATCAGGAGTGGTTTCGA
CTAGAGTTGGAACGTCAGGATAAATCTGTGAAAGAAAAGAAGCAGAAAAG
GGAAGAGCGCAAACGTCGTAAAGCAGCGGCTAAAGCCGCCGGGGCAGCAC
GGGCGGGGGGGGAGCAGAGTGAGGAGATCACTCGTGCTGCGCGTCCACAA
AGGAAGTCATTGTCAGACTGGAGGGGCAAGCTCAGCATGGCAGGGTTCGG
CACTGACAAGGCTGGCATTGCGAGAAGTTCCGCTGGAGACGTCTCGTCGC
TTGTCGGGAAAGAAAAGTTGGTAGTGCAACAACAAGAGGCATACGGCGAT
AAGTTCTACAAACAGGATAAATCTGTGAAAGAAAAGAAGCAGAAAAGGGA
AGAGCGCAAACGTCGTAAAGCAGCGGCTAAAGCCGCCGGGGCAGCACGGG
CGGGGGGGGAGCAGAGTGAGGAGATCACTCGTGCTGCGCGTCCACAAAGG
AAGTCATTGTCAGACTGGAGGGGCAAGCTCAGCATGGCAGGGTTCGGCAC
TGACAAGGCTGGCATTGCGAGAAGTTCCGCTGGAGACGTCTCGTCGCTTG
TCGGGAAAGAAAAGTTGGTAGTGCAACAACAAGAGGCATACGGCGATAAG
TTCTACAAACAGGAGGAAGAGTTCGCAGACACTGGGTACCAGGTTGCTCC
AGCAGATGCTAACTCGGGTGGTAATAGGCCTTCCGCTCCGCAGCTGGGTG
CCCTTACCTTCGAAGATTTCCGCAGAAAGCCCGAGGCTTCCTCAAATGAG
AACAGGAGGAAGAGTTCGCAGACACTGGGTACCAGGTTGCTCCAGCAGAT
GCTAACTCGGGTGGTAATAGGCCTTCCGCTCCGCAGCTGGGTGCCCTTAC
CTTCGAAGATTTCCGCAGAAAGCCCGAGGCTTCCTCAAATGAGAACAGGC
GACTTTTCCAGCCAAACTTGACACGAGCTGGCCAACCTGGAGGTGGTGGA
GCGCAGCCCACGCCATCCATACAGCCACGACCACAAAGACCTCCGCCACC
CCAAGTTCCAGCCGCAGAGCCAGGATCATCGCCAACCCCGCCTGCCCCGC
CCACATCTGCCCGATCAACAATGCCACAACCACCACCGCCGCCGGCCCAA
GGAGCAACTTACTCGGCGTCACTTGGTACGCTAACGGGAGCCCCCAACCC
AGACATTGCAACACACGCGGCTCCGCCAGGGCCACCGCCCGCGCAATCTC
GACCCCCTCCTCCACGAGGAGCACCACCTCCTCCACCACCGCCGCCCCCC
CTAACCCGCCACCCCTCTTTTCAGGTGCCAATTGGAGAGGCCGTGCCTGT
TCCTGCTTCCGTGGTGGACGAGGCACCTCTTCGTCCGAGTTACGAGGTTT
GGGGGGCTGAGGATGAAGGGGTACAAGTACAAGGCAGCCCTGCACTGCCA
CCACCACCGCCAGCTCAAGCCCTACCTGATCAGGCGACTTTTCCAGCCAA
ACTTGACACGAGCTGGCCAACCTGGAGGTGGTGGAGCGCAGCCCACGCCA
TCCATACAGCCACGACCACAAAGACCTCCGCCACCCCAAGTTCCAGCCGC
AGAGCCAGGATCATCGCCAACCCCGCCTGCCCCGCCCACATCTGCCCGAT
CAACAATGCCACAACCACCACCGCCGCCGGCCCAAGGAGCAACTTACTCG
GCGTCACTTGGTACGCTAACGGGAGCCCCCAACCCAGACATTGCAACACA
CGCGGCTCCGCCAGGGCCACCGCCCGCGCAATCTCGACCCCCTCCTCCAC
GAGGAGCACCACCTCCTCCACCACCGCCGCCCCCCCTAACCCGCCACCCC
TCTTTTCAGGTGCCAATTGGAGAGGCCGTGCCTGTTCCTGCTTCCGTGGT
GGACGAGGCACCTCTTCGTCCGAGTTACGAGGTTTGGGGGGCTGAGGATG
AAGGGGTACAAGTACAAGGCAGCCCTGCACTGCCACCACCACCGCCAGCT
CAAGCCCTACCTGATCAGGGTCCGACGTCAAATAATGGTTGGCTGTCCGA
TGTGCCTCCAGCGCCTCCTCTACCACCAGCCCGTCTGCCTGTGCCTCCTC
CGGGTCCGACGTCAAATAATGGTTGGCTGTCCGATGTGCCTCCAGCGCCT
CCTCTACCACCAGCCCGTCTGCCTGTGCCTCCTCCGCCCCTGCAGGCCCC
CGCATCGCAACCTGGTCTCCCACCAATACCTCCGCCACTACCACCGCTGC
TCCCTGAAGGCCAGCCACCAGGCGCGCCCCAGCCTCCACAGGCTGTTGCC
GCGGGGGGTCGACCCTCGATCCACAATGACCTCTTGTCCAGCATCACTGC
AGGCAAGACTTTACGGGTAGTGAAACCAAGGGAGCCGGACCCTGCTGGTG
GTGCAATGGATAGTAGCGGCAATGAGCTTCTGGATGCCATCAACCCCTGC
AGGCCCCCGCATCGCAACCTGGTCTCCCACCAATACCTCCGCCACTACCA
CCGCTGCTCCCTGAAGGCCAGCCACCAGGCGCGCCCCAGCCTCCACAGGC
TGTTGCCGCGGGGGGTCGACCCTCGATCCACAATGACCTCTTGTCCAGCA
TCACTGCAGGCAAGACTTTACGGGTAGTGAAACCAAGGGAGCCGGACCCT
GCTGGTGGTGCAATGGATAGTAGCGGCAATGAGCTTCTGGATGCCATCAA
GAAGGGTGCTAAGCTGAACCCTGTAAAGCAAGCAGAGGAACCGTCAGTTG
GAAGCAGTAATCCTCTCTTGGGCGGTAACCCCGGTATCAACGATATCCTC
GCAAGGAAGGGTGCTAAGCTGAACCCTGTAAAGCAAGCAGAGGAACCGTC
AGTTGGAAGCAGTAATCCTCTCTTGGGCGGTAACCCCGGTATCAACGATA
TCCTCGCAAGGCGCCAATTCTTGGAAGCGGAGAGTGAAGATTCGGATAGC
GATGACGATTCTGACTGGGAGGATGATTGAGCGCCAATTCTTGGAAGCGG
AGAGTGAAGATTCGGATAGCGATGACGATTCTGACTGGGAGGATGATTGA back to top
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