Homology
BLAST of mRNA_H-paniculata_contig9398.17159.1 vs. uniprot
Match:
D8LLP2_ECTSI (Protein cereblon n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLP2_ECTSI)
HSP 1 Score: 102 bits (255), Expect = 4.680e-20
Identity = 69/157 (43.95%), Postives = 80/157 (50.96%), Query Frame = 0
Query: 14 VGTAAEVRWRH------EDGGEEGYLHQSVAVMARGRHRFRLLDCRGIMRGDVWYYKVVICPDLCPPAPLRAPVPRLLRDMTSGDKNGSMGSMNCRKREYGCVGGGSGEEGRRAAKEAGRRGSCRHWVMSIPRFVVAINSPDALAARAGHLLREARE 164
VGT AEVR H DGG E +A+MARGRHRFRL++ G RG V Y+KVVICPD CP R PVPR R+ D+ G RR ++ G HW M++PRF V NSP LAARA LLRE RE
Sbjct: 159 VGTTAEVRSGHGGSAEDADGGGEXXXXGGLAMMARGRHRFRLVEDLGWRRG-VLYWKVVICPDHCP-GTFRPPVPRAFREFPGTDRRG-----------------------RRRRRDGGN-----HWPMAVPRFAVVANSPAVLAARAASLLREQRE 285
BLAST of mRNA_H-paniculata_contig9398.17159.1 vs. uniprot
Match:
A0A6H5KP54_9PHAE (CULT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP54_9PHAE)
HSP 1 Score: 89.7 bits (221), Expect = 1.070e-15
Identity = 61/138 (44.20%), Postives = 71/138 (51.45%), Query Frame = 0
Query: 27 GGEEGYLHQSVAVMARGRHRFRLLDCRGIMRGDVWYYKVVICPDLCPPAPLRAPVPRLLRDMTSGDKNGSMGSMNCRKREYGCVGGGSGEEGRRAAKEAGRRGSCRHWVMSIPRFVVAINSPDALAARAGHLLREARE 164
GG EG +A+MARGRHRFRL++ G RG V Y+KVVIC D CP + PVPR R+ G+G GRR RR HW M++PRF V NSP LAARA LLRE RE
Sbjct: 237 GGGEGGDGGGLAMMARGRHRFRLVEDLGWRRG-VRYWKVVICSDHCP-GTFQPPVPRAFREFP-----------------------GTGRRGRR------RRDGGNHWTMAVPRFAVVANSPAVLAARAASLLREQRE 343
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9398.17159.1 vs. uniprot
Analysis Date: 2022-09-16 (
Diamond blastp: OGS1.0 vs UniRef90 )
Total hits: 2
50 100 150 200 250 300 350 Expect = 4.68e-20 / Id = 43.95 Expect = 1.07e-15 / Id = 44.20 Sequence D8LLP2_ECTSI A0A6H5KP54_9PHAE
Match Name E-value Identity Description
D8LLP2_ECTSI 4.680e-20 43.95 Protein cereblon n=1 Tax=Ectocarpus siliculosus Ta... [more]
A0A6H5KP54_9PHAE 1.070e-15 44.20 CULT domain-containing protein n=1 Tax=Ectocarpus ... [more]
back to top
InterPro
Analysis Name:
InterProScan on OGS1.0
Date Performed: 2022-09-29
50 100 150 200 250 300 350 Expect = 8.2E-11 / Score = 43.7 Sequence G3DSA:1.20.58.1480
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available GENE3D 1.20.58.1480 coord: 341..387 e-value: 8.2E-11 score: 43.7
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence
>prot_H-paniculata_contig9398.17159.1 ID=prot_H-paniculata_contig9398.17159.1|Name=mRNA_H-paniculata_contig9398.17159.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=398bp MSWNHDGSASIVGVGTAAEVRWRHEDGGEEGYLHQSVAVMARGRHRFRLL DCRGIMRGDVWYYKVVICPDLCPPAPLRAPVPRLLRDMTSGDKNGSMGSM NCRKREYGCVGGGSGEEGRRAAKEAGRRGSCRHWVMSIPRFVVAINSPDA LAARAGHLLREARESPRLQPSATNAHPAAVAVGPLAMVNADEVSALGSAT NGTEEGGERRRSSRATMERFLAALERGFYRSDGGNGDAGTGAGAERREIT GGGSGAPVARAVAPRATVGEVAAGRAGHGSVVVNEVLEERGGGGVDGTGA RSNERNETSYPAVGGDMEGDEEGWRHGGVGTGYGGGEEGNEGQVGRRKPD PTHFSFWLAANLPLDDSARQELLDMDSVVSRLRLDVSGRSRVVAFRL* back to top