prot_H-paniculata_contig9234.17028.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig9234.17028.1
Unique Name	prot_H-paniculata_contig9234.17028.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	116

Homology

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BLAST of mRNA_H-paniculata_contig9234.17028.1 vs. uniprot
Match: A0A6H5K0I9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0I9_9PHAE)

HSP 1 Score: 57.4 bits (137), Expect = 3.240e-7
Identity = 25/43 (58.14%), Postives = 33/43 (76.74%), Query Frame = 0

Query:    4 KISPHLAAAQGDLATIATYLKEGGLVDKRDTDQWTPCMVAVRE 46
            KI  H AA  G+LA +  +LK GG+VDKRD+D+WTP M++VRE
Sbjct:    5 KIDIHEAAGDGNLAEVRAFLKAGGIVDKRDSDRWTPLMLSVRE 47

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig9234.17028.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig9234.17028.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1

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POSITION

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Match Name	E-value	Identity	Description
A0A6H5K0I9_9PHAE	3.240e-7	58.14	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29

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POSITION

0


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002110	Ankyrin repeat	SMART	SM00248	ANK_2a	coord: 35..64 e-value: 0.0016 score: 27.7 coord: 68..98 e-value: 3.5E-4 score: 29.9
IPR002110	Ankyrin repeat	PFAM	PF00023	Ank	coord: 35..65 e-value: 0.0044 score: 17.4
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 35..67 score: 10.526
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 68..100 score: 11.06
IPR036770	Ankyrin repeat-containing domain superfamily	GENE3D	1.25.40.20		coord: 2..115 e-value: 1.4E-33 score: 117.6
IPR036770	Ankyrin repeat-containing domain superfamily	SUPERFAMILY	48403	Ankyrin repeat	coord: 8..111
IPR020683	Ankyrin repeat-containing domain	PFAM	PF12796	Ank_2	coord: 68..113 e-value: 2.7E-9 score: 37.5
IPR020683	Ankyrin repeat-containing domain	PROSITE	PS50297	ANK_REP_REGION	coord: 8..115 score: 29.415
None	No IPR available	PANTHER	PTHR24134:SF3	ANKYRIN REPEAT FAMILY PROTEIN	coord: 22..110
None	No IPR available	PANTHER	PTHR24134:SF3	ANKYRIN REPEAT FAMILY PROTEIN	coord: 8..63
None	No IPR available	PANTHER	PTHR24134	FAMILY NOT NAMED	coord: 8..63
None	No IPR available	PANTHER	PTHR24134	FAMILY NOT NAMED	coord: 22..110

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig9234	contig	H-paniculata_contig9234:9162..9509 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig9234.17028.1	mRNA_H-paniculata_contig9234.17028.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig9234 9162..9509 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig9234.17028.1 ID=prot_H-paniculata_contig9234.17028.1|Name=mRNA_H-paniculata_contig9234.17028.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=116bp
MATKISPHLAAAQGDLATIATYLKEGGLVDKRDTDQWTPCMVAVREGHVA
VAQQLLRAGANVEARESDRWTALHVAAANGQLQCCQMLLDRGAKNTVLDE
NKRTPLHWATRCRRK*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002110	Ankyrin_rpt
IPR036770	Ankyrin_rpt-contain_sf
IPR020683	Ankyrin_rpt-contain_dom