prot_H-paniculata_contig91.16934.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig91.16934.1
Unique Nameprot_H-paniculata_contig91.16934.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length386
Homology
BLAST of mRNA_H-paniculata_contig91.16934.1 vs. uniprot
Match: A0A6H5JLH3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLH3_9PHAE)

HSP 1 Score: 207 bits (528), Expect = 1.520e-58
Identity = 159/422 (37.68%), Postives = 199/422 (47.16%), Query Frame = 0
Query:   50 GRFDAGAWENMPTS-------------NMVDKHLKPAVEDGAHVD-------LDIDQLPTFVFFA-DGGR-RREDVVGGSIARACRAKLEAKLLSFSV----------LHGNDSL---------PVGEGTAATPR--ATDTAGAGNGIPSDTNIDKVGISAGVRLENYAID------NILEVPSREELFDIVTSSGRTAEQGPVVVMYHAPWCRKCAYLAPVFRHLATKQVTSCSLAEGSGDGENSWSRKA-IFCRVDVS--AWGGK-AYRRTAAGRVGAASLVT-----------------------RDIADTRANEGGARKSAHVGEARNDIQA----------EEEKRRVSLLHEGSPSMEKCEVCEGSGFVSCGEXXXXXAVERCSSDGQHKLAVTCPACVGYKRLRCPACGGQCYMC 385
            G FDA AW+NMP+S             + V      A++D   V+       + +D+LPTFVFF  D GR RRE+V GG  AR C  KL  +L S S           L  NDS           VG G A T    A    GA  G     N    G+  G       +D      NI+E+  + EL  ++ + G    QGPVVVMYHAPWCRKCAYLAPVFR LA  Q TS  + +  G   +  S    +FCRVDVS  +WG + A R ++      AS  T                       R+ A   A      +   VG+    + A          E +     LLH GS ++E C+VC GSGFV CGE     AV R S DG+H +AVTC +CVGYKRLRCP+CGG+CYMC
Sbjct:   99 GMFDADAWKNMPSSPPLVTAPPTSLNPSAVQLSANGALDDEGGVEGREEPISVYVDKLPTFVFFVRDNGRHRREEVTGGRDARTCATKLRERLASISSPGSTWTNSGSLDDNDSPLRPSGAGEGGVGGGVARTRSDGAAVVGGAAEGPNRLDNETDTGMGRGNGGMGAIVDGTGSPTNIVEISDKRELLRVLGARGEG--QGPVVVMYHAPWCRKCAYLAPVFRRLAAAQATSVGVTKAGGSSSDRGSSGGPLFCRVDVSDPSWGRRRAVRGSSVAPATVASEGTAAXXXXXXXXXXXXXXXXXVRRARNKASIAAGASSQARGLGVGDRAAGLMAADATATPANAEGKIAETELLHAGSQAVENCDVCGGSGFVPCGECGGLGAVSRASPDGKHTMAVTCSSCVGYKRLRCPSCGGKCYMC 518          
BLAST of mRNA_H-paniculata_contig91.16934.1 vs. uniprot
Match: D7FW10_ECTSI (Serine/threonine protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW10_ECTSI)

HSP 1 Score: 132 bits (333), Expect = 9.290e-31
Identity = 127/368 (34.51%), Postives = 162/368 (44.02%), Query Frame = 0
Query:   52 FDAGAWENMPTS----NMVDKHLKPAV---------------EDGAHVDLDIDQLPTFVFFA-DGGR-RREDVVGGSIARACRAKLEAKLLSFSV----------LHGNDS--LPVGEGT------AATPRATDTAGAGNGIPSDTNIDK-----VGISAGVRLENYAID------NILEVPSREELFDIVTSSGRTAEQGPVVVMYHAPWCRKCAYLAPVFRHLATKQVTSCSLAEGSGDG-ENSWSRKAIFCRVDVS--AWGGKAYRRTAAGRVGAASLV---------------------TRDIADTRANEG-----GARKSAHVGEARNDIQAEEEKR--RVSLLHEGSPSMEKCEVCEGSGFV 338
            FDA AW+NMP+S          L P+                E     ++D+++LPTFVFF  D GR RRE+V+GG  AR C  +L  +L S S           L  NDS   P G G       AA   +   A  G        +D      +G  +G  + N  +D      NI+E+  + +L  ++ + G    QGPVVVMYHAPWCRKCAYL PVFR LA  Q  S  + EG G   E   S   +FCRVDVS  +WG    RR   G   A S V                     T  IA   +++      G R +  V        AE E       LLH GS ++E C+VC GSGFV
Sbjct:  101 FDADAWKNMPSSPPPVTAPPTSLNPSAVQLSSNDALDGEGEEEREEPTNVDVEKLPTFVFFVRDKGRHRREEVIGGRDARTCATELSERLASISSPGSTWTNSGSLDDNDSPLRPSGAGEGGVGGGAARTSSDGAAVVGGAAEGPDRLDYETDTGMGRGSGDMVAN--VDGTGNPTNIVEISDKRDLLRVLGALGEG--QGPVVVMYHAPWCRKCAYLTPVFRRLAAAQAPSAGVREGGGSSIERGSSEGPLFCRVDVSHPSWG---RRRAVRGASVAPSTVASAGTAAXXXXXXXXXXXXPNTAAIAAGASSQAQGLGFGDRAAGWVAADATTATAEAEGTIAETELLHAGSQAVENCDVCGGSGFV 461          
BLAST of mRNA_H-paniculata_contig91.16934.1 vs. uniprot
Match: A0A7S3UU24_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UU24_HETAK)

HSP 1 Score: 65.5 bits (158), Expect = 3.350e-8
Identity = 56/182 (30.77%), Postives = 80/182 (43.96%), Query Frame = 0
Query:  204 VVVMYHAPWCRKCAYLAPVFRHLATKQVTSCSLAEGSGDGENSWSRKAIFCRVDVSAWGGKAYRRTAAGRVGAASLVTRDIADTRANEGGARKSAHVGEARNDIQAEEEKRRVSLLHEGSPSMEKCEVCEGSGFVSCGEXXXXXAVERCSSDGQHKLAVTCPACVGYKRLRCPACGGQCYMC 385
            +V  Y A WCRKC YL   F+ +A                EN      +F  +D+                G  S   R I +   ++    +  + G++     ++EEK            ++ C  C+ +GFV    XXXXX V R S  G+H++A  CP CVGYK+ RCP CGG+C MC
Sbjct:  187 LVCKYGASWCRKCKYLDNPFKKIA----------------ENCQDLSFLFLDIDID---------------GLVSAEER-IGELSESDSSGPRQENFGDS-----SDEEK------------IKNCLRCDSTGFVEXXXXXXXXXVLRIS--GEHEVADICPVCVGYKKTRCPECGGKCLMC 317          
BLAST of mRNA_H-paniculata_contig91.16934.1 vs. uniprot
Match: A0A7S0BK45_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BK45_9RHOD)

HSP 1 Score: 57.8 bits (138), Expect = 5.450e-7
Identity = 27/70 (38.57%), Postives = 37/70 (52.86%), Query Frame = 0
Query:  316 VSLLHEGSPSMEKCEVCEGSGFVSCGEXXXXXAVERCSSDGQHKLAVTCPACVGYKRLRCPACGGQCYMC 385
             S+  +    ++ C +CE +GFVSC       A E   +    K  V C  CVG  +LRCP CGG+C+MC
Sbjct:   35 TSMSEKSEDQVKDCRMCENTGFVSC------VACEGQGTTVTGKYTVFCSECVGRGKLRCPTCGGKCFMC 98          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig91.16934.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5JLH3_9PHAE1.520e-5837.68Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FW10_ECTSI9.290e-3134.51Serine/threonine protein kinase n=1 Tax=Ectocarpus... [more]
A0A7S3UU24_HETAK3.350e-830.77Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A7S0BK45_9RHOD5.450e-738.57Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.30.10coord: 183..268
e-value: 1.4E-7
score: 33.2
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 28..385
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..27
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..27
IPR013766Thioredoxin domainPFAMPF00085Thioredoxincoord: 200..232
e-value: 3.4E-5
score: 23.8
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 176..230

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig91contigH-paniculata_contig91:26423..27580 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig91.16934.1mRNA_H-paniculata_contig91.16934.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig91 26355..27928 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig91.16934.1 ID=prot_H-paniculata_contig91.16934.1|Name=mRNA_H-paniculata_contig91.16934.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=386bp
MTSYAIRATLSLTAVGALLSVQPPRRPILAPTQIRNVTPSSRLKTNANGG
RFDAGAWENMPTSNMVDKHLKPAVEDGAHVDLDIDQLPTFVFFADGGRRR
EDVVGGSIARACRAKLEAKLLSFSVLHGNDSLPVGEGTAATPRATDTAGA
GNGIPSDTNIDKVGISAGVRLENYAIDNILEVPSREELFDIVTSSGRTAE
QGPVVVMYHAPWCRKCAYLAPVFRHLATKQVTSCSLAEGSGDGENSWSRK
AIFCRVDVSAWGGKAYRRTAAGRVGAASLVTRDIADTRANEGGARKSAHV
GEARNDIQAEEEKRRVSLLHEGSPSMEKCEVCEGSGFVSCGECEGKGAVE
RCSSDGQHKLAVTCPACVGYKRLRCPACGGQCYMC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013766Thioredoxin_domain
IPR036249Thioredoxin-like_sf