prot_H-paniculata_contig9095.16926.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig9095.16926.1
Unique Nameprot_H-paniculata_contig9095.16926.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length319
Homology
BLAST of mRNA_H-paniculata_contig9095.16926.1 vs. uniprot
Match: A0A6H5JTI7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTI7_9PHAE)

HSP 1 Score: 285 bits (728), Expect = 1.940e-84
Identity = 176/344 (51.16%), Postives = 204/344 (59.30%), Query Frame = 0
Query:    1 VVVSSNFTSALDVLGAVAGANGWGFLRLDGGTASKERQSLVDRFNRALPEELFLFFLSAKAGGVGLNLVGANRIVLFDSDWNPATDDQAMARVWRLGQKKKVSMYRLLTTGTLEESIFQRQIFKGALYDLIHDSNEPSSRRTCQDDTNHEGVGRYASMYQTRTTGSSCSNSREAGRGGGKNSRGFSHDELRELFVLKRETPCDTYDKLRRGQGGPDGGKIAAHRYLDSNPEPTRSEVENVPAVPAPARARAGSLAEE--AEVNGREAGIACPSAGAK---------WGDYEGPESIIDLALRCALIDD--------GGTANG-------LVTFVHEVKKNVGPQ 318
            VVV+SNFTSALDVL  +A  N WGFLRLDGGT + ERQ+LVDRFNRA PE+LFLFFLSAKAGGVGLNLVGANRIVLFDSDWNPATDDQAMARVWRLGQ K+V MYRLL+TGTLEESIFQRQIFKGALYDLIHDSN+  S+                                      GK+ RGFS +EL+ELFVLK ET  DTYDKLRRG+         A    +                    R +  +L  E  A  +G E G   P+A A          W DY GP +++D ALR AL+++        GG+          +VTFV EVK+   P+
Sbjct:  748 VVVASNFTSALDVLETLAERNSWGFLRLDGGTTTNERQNLVDRFNRASPEDLFLFFLSAKAGGVGLNLVGANRIVLFDSDWNPATDDQAMARVWRLGQTKEVCMYRLLSTGTLEESIFQRQIFKGALYDLIHDSNDDPSKEXXXXXXXXXXXXXXXXXXXXXXXXXXXX------XXXGKSGRGFSQEELKELFVLKAETRSDTYDKLRRGRAAATPRAAGAAGVREGG------------------RYQEVTLEREVGARGDGEEDGWQGPTAAAAPVVDVEEQAWEDYVGPSAVVDKALRLALLEEATGTPSQVGGSXXXXXXXXXXVVTFVREVKRGGRPE 1067          
BLAST of mRNA_H-paniculata_contig9095.16926.1 vs. uniprot
Match: D8LMS0_ECTSI (SNF2-related domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMS0_ECTSI)

HSP 1 Score: 283 bits (724), Expect = 5.340e-84
Identity = 170/316 (53.80%), Postives = 198/316 (62.66%), Query Frame = 0
Query:    1 VVVSSNFTSALDVLGAVAGANGWGFLRLDGGTASKERQSLVDRFNRALPEELFLFFLSAKAGGVGLNLVGANRIVLFDSDWNPATDDQAMARVWRLGQKKKVSMYRLLTTGTLEESIFQRQIFKGALYDLIHDSNEPSSRRTCQDDTNHEGVGRYASMYQTRTTGSSCSNSREAGRGGGKNSRGFSHDELRELFVLKRETPCDTYDKLRRGQGGPD---GGKIAAH---RYLDSNPEPTRSEVENVPAVPAPARARAGSLAEEAEVNGREAGIACPSAGA----KWGDYEGPESIIDLALRCALIDDG-GTANGLV 305
            VVV+SNFTSALDVL  +A  N WGFLRLDGGT +  RQ+LVDRFNRA PE+LFLF+LS KAGGVGLNLVGANRIVLFDSDWNPATDDQAMARVWRLGQ K+VSMYRLL+TGTLEESIFQRQIFKGALYDLIHDSN+  S+                                     G K+ RGFS +EL+ELFVL+ ET  DTYDKLRRG+        G  +AH   RY +  PE                   AG+  +  E  GR A  A     A     W DY GP +++D ALR AL+++  GT++ +V
Sbjct:  778 VVVASNFTSALDVLETLAERNAWGFLRLDGGTTTNARQNLVDRFNRASPEDLFLFYLSTKAGGVGLNLVGANRIVLFDSDWNPATDDQAMARVWRLGQTKEVSMYRLLSTGTLEESIFQRQIFKGALYDLIHDSNDDPSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG-KSGRGFSQEELKELFVLRTETRSDTYDKLRRGRAAATPTAAGAASAHEGGRYQEVTPE-----------------REAGARGDGEEDGGRGATAAAAPVVAVEEEAWEDYGGPSAVVDKALRLALLEEPTGTSSQVV 1075          
BLAST of mRNA_H-paniculata_contig9095.16926.1 vs. uniprot
Match: UPI000D1C7E7D (DNA repair and recombination protein RAD54-like n=2 Tax=Selaginella moellendorffii TaxID=88036 RepID=UPI000D1C7E7D)

HSP 1 Score: 171 bits (434), Expect = 2.350e-44
Identity = 96/212 (45.28%), Postives = 123/212 (58.02%), Query Frame = 0
Query:    1 VVVSSNFTSALDVLGAVAGANGWGFLRLDGGTASKERQSLVDRFNRALPEELFLFFLSAKAGGVGLNLVGANRIVLFDSDWNPATDDQAMARVWRLGQKKKVSMYRLLTTGTLEESIFQRQIFKGALYDLIHDSN--EPSSRRTCQDDTNHEGVGRYASMYQTRTTGSSCSNSREAGRGGGKNSRGFSHDELRELFVLKRETPCDTYDKLRR 210
            +V++SNFT  LD++ A+   + W F+RLDGGT   ERQSLV+RFNR + E   +F LS+KAGG GLNL+GANR+VL D DWNPA D Q M+R+WR GQ K V +YRLL+TG++EE I+QRQI K  L     D +  +P+ +RT                                      N + FS  ELREL  L  ET C+TYD L R
Sbjct:  571 IVIASNFTQTLDLIEAMCNEHSWKFVRLDGGTMISERQSLVERFNRRIGEAS-IFLLSSKAGGTGLNLIGANRLVLVDPDWNPANDAQVMSRIWREGQPKPVKIYRLLSTGSIEEKIYQRQIMKKDLTSFFGDQSTYQPTCKRT--------------------------------------NDQKFSRQELRELLKLPSETKCETYDLLCR 743          
BLAST of mRNA_H-paniculata_contig9095.16926.1 vs. uniprot
Match: A0A2K1K7S9_PHYPA (Uncharacterized protein n=5 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1K7S9_PHYPA)

HSP 1 Score: 170 bits (430), Expect = 1.280e-43
Identity = 92/215 (42.79%), Postives = 128/215 (59.53%), Query Frame = 0
Query:    1 VVVSSNFTSALDVLGAVAGANGWGFLRLDGGTASKERQSLVDRFNRALPEELFLFFLSAKAGGVGLNLVGANRIVLFDSDWNPATDDQAMARVWRLGQKKKVSMYRLLTTGTLEESIFQRQIFKGALYDLIHDSNEPSSRRTCQDDTNHEGVGRYASMYQTRTTGSSCSNSREAGRGGGKNSRGFSHDELRELFVLKRETPCDTYDKLRRGQGGP 215
            VVV SNFT  LD++  +  + GW +LRLDG T + +RQ LVD+ N  + + +F+F LS+KAGG GLNL+GANR+VLFD DWNPATD QA+AR+WR GQ K V +YRLL+TG++EE I+QRQI KG +   +    +  ++++         +GR+                             FS +EL+ELF L   T CDT+D + R +  P
Sbjct:  861 VVVVSNFTRTLDLIQDMCTSQGWNWLRLDGSTEASKRQLLVDQLNSGVGD-VFVFLLSSKAGGTGLNLIGANRLVLFDPDWNPATDSQAIARIWREGQLKPVLIYRLLSTGSIEEKIYQRQIMKGGMSAAVEGDADVHTKKS--------NIGRH-----------------------------FSKEELKELFTLNLATNCDTFDLISRTKTAP 1037          
BLAST of mRNA_H-paniculata_contig9095.16926.1 vs. uniprot
Match: A0A7S2W8P1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W8P1_9STRA)

HSP 1 Score: 169 bits (429), Expect = 1.470e-43
Identity = 86/147 (58.50%), Postives = 111/147 (75.51%), Query Frame = 0
Query:    1 VVVSSNFTSALDVLGAVAGANGWGFLRLDGGTASKERQSLVDRFNRALP-EELFLFFLSAKAGGVGLNLVGANRIVLFDSDWNPATDDQAMARVWRLGQKKKVSMYRLLTTGTLEESIFQRQIFKGALYDLIHDSNEPSSRRTCQDD 146
            VV+ SNFT+ALD+  A+A  +GW ++RLDG T  +ERQ+LVDR NR +P + LFLF LS+ AGGVGLNLVGA+R+VLFD+DWNPA D Q MARVWR GQ++ V +YRLL TGT+EE ++QRQ+ K  L   + D+  PS  R  QD+
Sbjct:  594 VVLVSNFTTALDLFEAMADHHGWQYVRLDGSTPQQERQALVDRCNRRVPGDNLFLFLLSSHAGGVGLNLVGASRLVLFDTDWNPAVDKQVMARVWRNGQRRPVFIYRLLCTGTIEEKMYQRQLSKDELSCAVEDAGGPSQGRFSQDE 740          
BLAST of mRNA_H-paniculata_contig9095.16926.1 vs. uniprot
Match: A0A2R6WFC2_MARPO (Uncharacterized protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6WFC2_MARPO)

HSP 1 Score: 169 bits (429), Expect = 1.730e-43
Identity = 99/210 (47.14%), Postives = 121/210 (57.62%), Query Frame = 0
Query:    1 VVVSSNFTSALDVLGAVAGANGWGFLRLDGGTASKERQSLVDRFNRALPEELFLFFLSAKAGGVGLNLVGANRIVLFDSDWNPATDDQAMARVWRLGQKKKVSMYRLLTTGTLEESIFQRQIFKGALYDLIHDSNEPSSRRTCQDDTNHEGVGRYASMYQTRTTGSSCSNSREAGRGGGKNSRGFSHDELRELFVLKRETPCDTYDKLRR 210
            +VV SNFT  LD++ ++     W +LRLDG T   ERQS VDRFN    EE  +F LS+KAGG GLNL+GANR+VLFD DWNPATD QAMARVWR GQ+K V +YRLL+TG+LEE I+QRQI K  +   + +  E            H G                               R FS +ELRELF L+ +T CDTYD L +
Sbjct:  486 IVVVSNFTQTLDIIQSLCEQEKWKWLRLDGTTEVSERQSKVDRFNSDYSEER-IFLLSSKAGGTGLNLIGANRLVLFDPDWNPATDAQAMARVWRDGQRKPVLIYRLLSTGSLEEKIYQRQIMKQEIAAAVGEQVEGQ--------LGHAG-------------------------------RHFSREELRELFTLRLDTRCDTYDLLTK 655          
BLAST of mRNA_H-paniculata_contig9095.16926.1 vs. uniprot
Match: A0A7S1FQD2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FQD2_9STRA)

HSP 1 Score: 162 bits (409), Expect = 5.130e-43
Identity = 98/218 (44.95%), Postives = 126/218 (57.80%), Query Frame = 0
Query:    1 VVVSSNFTSALDVLGAVAGANGWGFLRLDGGTASKERQSLVDRFNRALPEELFLFFLSAKAGGVGLNLVGANRIVLFDSDWNPATDDQAMARVWRLGQKKKVSMYRLLTTGTLEESIFQRQIFKGALYDLIHDSNEPSSRRTCQDDTNHEGVGRYASMYQTRTTGSSCSNSREAGRGGGKNSRGFSHDELRELFVLKRE-TPCDTYDKLRRGQGGPDG 217
            VVVSSNFTS LD+L       GW F RLDG T S++RQ +VD FNR   E+ F F LSA+AGG GLNLVGA+R++++D DWNPATD Q MAR++R GQ K  ++YRL TTGT+EE ++QRQI KG L   + +    S                        T G S +        GG++S  F+ +E+++ F LK E    DT  KL  G G  DG
Sbjct:  135 VVVSSNFTSVLDILARHLEMRGWTFQRLDGSTCSEKRQEMVDVFNRTSAEQNFCFLLSARAGGCGLNLVGASRLIMYDPDWNPATDLQTMARIYRTGQTKPTTIYRLFTTGTVEEIVYQRQIQKGNLASAVSEKTVAS------------------------TNGGSGN--------GGRSSSSFTAEEIKDCFDLKDEDVKSDTQRKL--GWGDYDG 318          
BLAST of mRNA_H-paniculata_contig9095.16926.1 vs. uniprot
Match: A0A383VN37_TETOB (Uncharacterized protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383VN37_TETOB)

HSP 1 Score: 167 bits (423), Expect = 1.120e-42
Identity = 99/221 (44.80%), Postives = 132/221 (59.73%), Query Frame = 0
Query:    1 VVVSSNFTSALDVLGAVAGANGWGFLRLDGGTASKERQSLVDRFNRALPEELFLFFLSAKAGGVGLNLVGANRIVLFDSDWNPATDDQAMARVWRLGQKKKVSMYRLLTTGTLEESIFQRQIFKGALYDLIHDSNE-PSSRRTCQDDTNHEGVGRYASMYQTRTTGSSCSNSREAGRGGGKNSRG---------FSHDELRELFVLKRETPCDTYDKLRRG 211
            VV+ SN+T  LD+  A+    G+  LRLDG T+  +RQ LV + N A   ++F+F LS+KAGG GLNLVGANR++LFD DWNPATD QA ARVWR GQ+K+V +YRLLT GT+EE +FQRQI K  L  ++  +   P +    Q      G G  A                + G+GGGK+++G          S +ELRELF L+ +   DTY+ +R G
Sbjct:  547 VVIVSNYTQTLDLFAALCRQRGYVHLRLDGSTSITKRQKLVGQLN-APGSKVFVFLLSSKAGGCGLNLVGANRLILFDPDWNPATDKQAAARVWRDGQRKRVYVYRLLTAGTIEEKVFQRQISKEGLQQVVDAAAAAPGALGAAQGQGASAGEGLAAE---------------DGGKGGGKSNQGGQGASSMSLMSAEELRELFSLRPDVASDTYEVIRGG 751          
BLAST of mRNA_H-paniculata_contig9095.16926.1 vs. uniprot
Match: A0A7S4K0Z8_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4K0Z8_9STRA)

HSP 1 Score: 164 bits (415), Expect = 4.570e-42
Identity = 96/215 (44.65%), Postives = 123/215 (57.21%), Query Frame = 0
Query:    1 VVVSSNFTSALDVL-GAVAGANGWGFLRLDGGTASKERQSLVDRFNRALPEELFLFFLSAKAGGVGLNLVGANRIVLFDSDWNPATDDQAMARVWRLGQKKKVSMYRLLTTGTLEESIFQRQIFKGALYDLIHDSNEPSSRRTCQDDTNHEGVGRYASMYQTRTTGSSCSNSREAGRGGGKNSRGFSHDELRELFVLKRETPCDTYDKLRRGQGG 214
            +V+ SN+TSAL ++   +    G+  +RLDG T    RQSLVD FNR+  E  F+F LS+KAGG GLNLVGANR+V+FD DWNPATD QAMARV+R GQ K   +YRL TTGT+EE I+QRQ+ K  L  L  D    S +                                 +GRGG     GF+ +ELR+ F LK +  CDT +K+ R + G
Sbjct:  417 IVIVSNYTSALSIIESTLLKPRGYNSVRLDGSTEGNARQSLVDTFNRSSAERQFVFLLSSKAGGCGLNLVGANRLVMFDPDWNPATDMQAMARVYRQGQTKPSYIYRLFTTGTVEEVIYQRQVQKNNLATLTVDGGGASKK---------------------------------SGRGG---RAGFTEEELRDCFTLKEDIDCDTRNKIGRARWG 595          
BLAST of mRNA_H-paniculata_contig9095.16926.1 vs. uniprot
Match: A0A0L0FQD1_9EUKA (Helicase C-terminal domain-containing protein (Fragment) n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FQD1_9EUKA)

HSP 1 Score: 153 bits (387), Expect = 1.040e-41
Identity = 83/147 (56.46%), Postives = 101/147 (68.71%), Query Frame = 0
Query:    1 VVVSSNFTSALDVLGAVAGANGWGFLRLDGGTASKERQSLVDRFNRALPE-ELFLFFLSAKAGGVGLNLVGANRIVLFDSDWNPATDDQAMARVWRLGQKKKVSMYRLLTTGTLEESIFQRQIFKGALYDLIHDSNEPSSRRTCQDD 146
            VV+ SN+T  LD+   + G   + F+RLDG  + K+RQ LVD+FN   PE   FLF LS+KAGG GLNL+GANR+VLFD DWNPATD QAMARVWR GQKK   +YRL++TG++EE IFQRQ  K AL   + D  E   R    DD
Sbjct:    1 VVLVSNYTQTLDLFEQMCGTRRYQFIRLDGSLSIKKRQKLVDQFND--PEGTTFLFLLSSKAGGCGLNLIGANRLVLFDPDWNPATDLQAMARVWRDGQKKTCFIYRLVSTGSIEEKIFQRQAHKQALSSCVVDEEEDVQRHFAMDD 145          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9095.16926.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JTI7_9PHAE1.940e-8451.16Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LMS0_ECTSI5.340e-8453.80SNF2-related domain-containing protein n=1 Tax=Ect... [more]
UPI000D1C7E7D2.350e-4445.28DNA repair and recombination protein RAD54-like n=... [more]
A0A2K1K7S9_PHYPA1.280e-4342.79Uncharacterized protein n=5 Tax=Physcomitrium pate... [more]
A0A7S2W8P1_9STRA1.470e-4358.50Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A2R6WFC2_MARPO1.730e-4347.14Uncharacterized protein n=2 Tax=Marchantia polymor... [more]
A0A7S1FQD2_9STRA5.130e-4344.95Hypothetical protein (Fragment) n=1 Tax=Corethron ... [more]
A0A383VN37_TETOB1.120e-4244.80Uncharacterized protein n=1 Tax=Tetradesmus obliqu... [more]
A0A7S4K0Z8_9STRA4.570e-4244.65Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A0L0FQD1_9EUKA1.040e-4156.46Helicase C-terminal domain-containing protein (Fra... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 12..97
e-value: 3.0E-14
score: 63.3
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 6..97
e-value: 8.4E-10
score: 39.0
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 1..138
score: 12.76
NoneNo IPR availableGENE3D3.40.50.300coord: 1..193
e-value: 3.7E-54
score: 185.8
NoneNo IPR availablePANTHERPTHR45629:SF3DNA REPAIR AND RECOMBINATION PROTEIN RAD54Bcoord: 1..213
NoneNo IPR availablePANTHERPTHR45629FAMILY NOT NAMEDcoord: 1..213
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 1..143

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig9095contigH-paniculata_contig9095:7334..9564 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig9095.16926.1mRNA_H-paniculata_contig9095.16926.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig9095 7334..9564 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig9095.16926.1 ID=prot_H-paniculata_contig9095.16926.1|Name=mRNA_H-paniculata_contig9095.16926.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=319bp
VVVSSNFTSALDVLGAVAGANGWGFLRLDGGTASKERQSLVDRFNRALPE
ELFLFFLSAKAGGVGLNLVGANRIVLFDSDWNPATDDQAMARVWRLGQKK
KVSMYRLLTTGTLEESIFQRQIFKGALYDLIHDSNEPSSRRTCQDDTNHE
GVGRYASMYQTRTTGSSCSNSREAGRGGGKNSRGFSHDELRELFVLKRET
PCDTYDKLRRGQGGPDGGKIAAHRYLDSNPEPTRSEVENVPAVPAPARAR
AGSLAEEAEVNGREAGIACPSAGAKWGDYEGPESIIDLALRCALIDDGGT
ANGLVTFVHEVKKNVGPQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001650Helicase_C
IPR027417P-loop_NTPase