prot_H-paniculata_contig9086.16922.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig9086.16922.1
Unique Nameprot_H-paniculata_contig9086.16922.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length179
Homology
BLAST of mRNA_H-paniculata_contig9086.16922.1 vs. uniprot
Match: D7FZE9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZE9_ECTSI)

HSP 1 Score: 154 bits (390), Expect = 3.090e-40
Identity = 83/173 (47.98%), Postives = 114/173 (65.90%), Query Frame = 0
Query:    4 RVSPTMQHGAHGDDDSSGGCLGCGSFCGQFCALVRKNALTKRRSKCQLVVELLFPALITLLIGLIKSSLTVDVFGEVVPVTDTPVPTYGELESSLSYPNVLCYDNNMFHRCACHEDEDTVTSPSAYLSGVGVNITGQAMWSTLHLEDSYYHFCSQAAQVLTYASTASTGDPAC 176
            RVSP+      GD D +       SF  QF ALVRKN L+KRR+K QL +ELL PA+I LL+G IK+++   V  E VP +DTPV TYG +++  ++PNVLC+DNNMF RC CH DED  ++P  YL+G+GV+ TG AMW+T H  ++   FC+ A   L+ +S+ ++   AC
Sbjct:    6 RVSPSA---GDGDTDHAA------SFLRQFGALVRKNFLSKRRAKLQLALELLCPAMIMLLVGSIKNTIVSQVTEETVPTSDTPVATYGAMQNISTFPNVLCFDNNMFMRCDCHLDEDAYSAPGIYLTGLGVDTTGVAMWATQHDANTLIAFCTAAVSALSGSSSNTSPTDAC 169          
BLAST of mRNA_H-paniculata_contig9086.16922.1 vs. uniprot
Match: D7FZE8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZE8_ECTSI)

HSP 1 Score: 150 bits (378), Expect = 1.260e-38
Identity = 74/134 (55.22%), Postives = 89/134 (66.42%), Query Frame = 0
Query:   26 CGSFCGQFCALVRKNALTKRRSKCQLVVELLFPALITLLIGLIKSSLTVDVFGEVVPVTDTPVPTYGELESSLSYPNVLCYDNNMFHRCACHEDEDTVTSPSAYLSGVGVNITGQAMWSTLHLEDSYYHFCSQA 159
            CG FC QF ALVRKN LTKRRSK QL +EL+ PALI LLIG+IK+S++        P TDTPV TY  L+++   PNVLCYDNN+FHRC CH   D    P +YLSG G+  TG A+W+T H  D+    C  A
Sbjct:    3 CGDFCRQFGALVRKNFLTKRRSKLQLAIELIVPALIMLLIGVIKNSISPKELPAGTPATDTPVVTYEALQNTTLSPNVLCYDNNVFHRCGCHRSTDDYEPPESYLSGAGIAFTGAAIWATQHDSDTLVSHCELA 136          
BLAST of mRNA_H-paniculata_contig9086.16922.1 vs. uniprot
Match: D7FZA6_ECTSI (ATP-binding Cassette (ABC) Superfamily n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZA6_ECTSI)

HSP 1 Score: 110 bits (275), Expect = 8.600e-25
Identity = 66/156 (42.31%), Postives = 87/156 (55.77%), Query Frame = 0
Query:   18 DSSGGCLGCGSFCGQFCALVRKNALTKRRSKCQLVVELLFPALITLLIGLIKSSLTVDVFGEVVPVTDTPVPTYGELESSLSYPNVLCYDNNMFHRCACHEDEDTVTSPSAYLSGVGVNITGQAMWSTLHLEDSYYHFCSQAAQVLTYASTASTGD 173
            D+S G     S   QFC L+RKN L  RR+   L++EL  PAL   L+GLIK       +   +P  DTPVPT+ +L++  S+PNVLCYDNN+F RC C  D   V  PS Y+SG+ V  T  AMW + H   +  + CS  A +    S+ S  D
Sbjct:    6 DASDGSTFSKSSWRQFCVLLRKNFLVTRRTPFSLLIELAVPALFLYLMGLIKGDSKPTRYEGDIPFADTPVPTFEDLQTFASHPNVLCYDNNIFFRCNC--DNYGVGFPSDYISGLPVTNTSLAMWGSGHALSTLAYVCSGLASLGGNFSSLSATD 159          
BLAST of mRNA_H-paniculata_contig9086.16922.1 vs. uniprot
Match: D8LFQ4_ECTSI (ABC transporter domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFQ4_ECTSI)

HSP 1 Score: 105 bits (263), Expect = 3.310e-23
Identity = 49/107 (45.79%), Postives = 66/107 (61.68%), Query Frame = 0
Query:   53 VELLFPALITLLIGLIKSSLTVDVFGEVVPVTDTPVPTYGELESSLSYPNVLCYDNNMFHRCACHEDEDTVTSPSAYLSGVGVNITGQAMWSTLHLEDSYYHFCSQA 159
            +EL+ PAL+ LLIG+IK+S++        P TDTPV TY  L+++   PNVLCYDNN+FHRC CH   D    P +Y+SG  +  T  A+W+T H  D+    C  A
Sbjct:   20 IELIVPALVMLLIGVIKNSISPKELPAGTPATDTPVVTYEALQNTTVSPNVLCYDNNVFHRCGCHRSTDDYEPPESYVSGAAITFTAAAIWATQHDSDTLLSHCQLA 126          
BLAST of mRNA_H-paniculata_contig9086.16922.1 vs. uniprot
Match: A0A6H5JSK1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSK1_9PHAE)

HSP 1 Score: 61.6 bits (148), Expect = 1.220e-9
Identity = 30/62 (48.39%), Postives = 41/62 (66.13%), Query Frame = 0
Query:   52 VVELLFPALITLLIGLIKSSLTVDVFGEVVPVTDTPVPTYGELESSLSYPNVLCYDNNMFHR 113
            ++EL  PAL   L+GLIK       +   +P  DTPVPT+ +L++  S+PNVLCYDNN+F R
Sbjct:    9 LIELAVPALFLYLMGLIKGDSEPTRYEGDIPFADTPVPTFEDLQTFASHPNVLCYDNNIFFR 70          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9086.16922.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FZE9_ECTSI3.090e-4047.98Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FZE8_ECTSI1.260e-3855.22Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FZA6_ECTSI8.600e-2542.31ATP-binding Cassette (ABC) Superfamily n=1 Tax=Ect... [more]
D8LFQ4_ECTSI3.310e-2345.79ABC transporter domain-containing protein n=1 Tax=... [more]
A0A6H5JSK1_9PHAE1.220e-948.39Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..50
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 69..179
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 51..68
NoneNo IPR availableTMHMMTMhelixcoord: 51..68

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig9086contigH-paniculata_contig9086:3143..9308 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig9086.16922.1mRNA_H-paniculata_contig9086.16922.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig9086 3005..9308 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig9086.16922.1 ID=prot_H-paniculata_contig9086.16922.1|Name=mRNA_H-paniculata_contig9086.16922.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=179bp
MESRVSPTMQHGAHGDDDSSGGCLGCGSFCGQFCALVRKNALTKRRSKCQ
LVVELLFPALITLLIGLIKSSLTVDVFGEVVPVTDTPVPTYGELESSLSY
PNVLCYDNNMFHRCACHEDEDTVTSPSAYLSGVGVNITGQAMWSTLHLED
SYYHFCSQAAQVLTYASTASTGDPACYLT
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