prot_H-paniculata_contig9075.16909.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig9075.16909.1
Unique Nameprot_H-paniculata_contig9075.16909.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length238
Homology
BLAST of mRNA_H-paniculata_contig9075.16909.1 vs. uniprot
Match: D7FYH6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYH6_ECTSI)

HSP 1 Score: 239 bits (611), Expect = 2.720e-74
Identity = 136/243 (55.97%), Postives = 162/243 (66.67%), Query Frame = 0
Query:   26 MQGRVFGEGRRVHLRLLDIDPCAGVLEGVAMEIRDCCCDLARFFRLVTEVVVTTDPKIAFQGADAVVLLGGFPRLPGMERRDLIAKNVPIMAEHGKEIAECASKSVRVLVVANPACTNCLV--------------ASACAPSIPKSQFSSLSRLDHDRLSAMLAEEI-SADLHDGVAAVTRADSNG----------RRQPSFAGKTTGFLE-----IRNVCLWGNHSPTMWPDVSMAEARIPG 238
            M GRVFGEGR+V LRLLDI+ C G L+G AMEI+DC  DL      VTEVV T+DP++AF+GAD  VLLGGFPRLPGMERRDLIAKNVPIMAEHG+ +A+CA   VRVLVVANPACTNCL+              A+  APSIP+S FSSL+RLD DRLSAMLAE + S +  +  +   R   +G          R+      +    L+     +R V +WGNHSPTMWPDVS AEA+I G
Sbjct:    1 MHGRVFGEGRKVRLRLLDIEACVGALQGFAMEIQDCNSDL------VTEVVATSDPEVAFKGADVAVLLGGFPRLPGMERRDLIAKNVPIMAEHGRALAKCAKDGVRVLVVANPACTNCLMVTERKISPVLMNDEAATSAPSIPRSHFSSLARLDQDRLSAMLAENLCSEETLEQTSGGARTPLSGDVSLPQQEPERQHAVRTRQDRNILQLEGPGVRGVYVWGNHSPTMWPDVSGAEAKIDG 237          
BLAST of mRNA_H-paniculata_contig9075.16909.1 vs. uniprot
Match: D7FQW1_ECTSI (Malate dehydrogenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQW1_ECTSI)

HSP 1 Score: 202 bits (513), Expect = 4.420e-61
Identity = 113/231 (48.92%), Postives = 148/231 (64.07%), Query Frame = 0
Query:    8 VAITGGAGQIAYALLPLIMQGRVFGEGRRVHLRLLDIDPCAGVLEGVAMEIRDCCCDLARFFRLVTEVVVTTDPKIAFQGADAVVLLGGFPRLPGMERRDLIAKNVPIMAEHGKEIAECASKSVRVLVVANPACTNCLVASACAPSIPKSQFSSLSRLDHDRLSAMLAEEISADLHDGVAAVTRADSNGRRQPSFAGKTTGFLEIRNVCLWGNHSPTMWPDVSMAEARIPG 238
            V +TGGAGQIAY+L+PLI +G VFG   RV+LRLLDI P A  LEGVAME++D     + F   +  ++ TTD   AF GA   +LLGGFPR PGMER DLI KN  IM   G  + + AS++ +V+VVANPA TNC+V ++ APSIP+   S LSRLDHDR++ ML  E +  L     A   A+ NG  +   + +  G  ++R +C+WGNHS +  PD S  E R+ G
Sbjct:   10 VVVTGGAGQIAYSLIPLIARGLVFGPRTRVNLRLLDIPPSASALEGVAMEVQD-----SLFSTALDGILATTDEAKAFDGAQVAILLGGFPRRPGMERGDLIEKNAGIMKRMGGCLEKHASRNCKVVVVANPAPTNCIVLASYAPSIPRKNISCLSRLDHDRMAGMLLHEANRCL-----AAAAANGNGSAKGG-SWQRLGPADVRGICVWGNHSNSQVPDASAVEFRVNG 229          
BLAST of mRNA_H-paniculata_contig9075.16909.1 vs. uniprot
Match: A0A097IUL1_9PHAE (Malate dehydrogenase n=1 Tax=Scytosiphon dotyi TaxID=180438 RepID=A0A097IUL1_9PHAE)

HSP 1 Score: 202 bits (514), Expect = 2.530e-59
Identity = 114/234 (48.72%), Postives = 145/234 (61.97%), Query Frame = 0
Query:    8 VAITGGAGQIAYALLPLIMQGRVFGEGRRVHLRLLDIDPCAGVLEGVAMEIRDCCCDLARFFRLVTEVVVTTDPKIAFQGADAVVLLGGFPRLPGMERRDLIAKNVPIMAEHGKEIAECASKSVRVLVVANPACTNCLVASACAPSIPKSQFSSLSRLDHDRLSAMLAEEISADLHDGVAAVTRADSNGRRQ---PSFAGKTTGFLEIRNVCLWGNHSPTMWPDVSMAEARIPG 238
            V +TGGAGQIAY+L+PLI +G VFG   RV+LRLLDI P A  LEGVAMEI+D     + F  ++  V+ TTD   AF+GA   +LLGGFPR PGMER DLI KN  IM   G+ +   AS++ +V+VVANPA TNC+V ++ APSIP+   S LSRLDHDR+  ML  E +  L +   +V      G           +  G  +IR VC+WGNHS +  PD S  E  + G
Sbjct:    9 VVVTGGAGQIAYSLIPLIARGLVFGAETRVNLRLLDIPPSAMALEGVAMEIQD-----SLFLTVLDGVIATTDEAKAFEGAQVAILLGGFPRRPGMERGDLIGKNAGIMKRMGEALERYASRNCKVVVVANPAPTNCIVLASHAPSIPRKNISCLSRLDHDRMVGMLLHEANRCLAEASGSVGNGTLGGVSDGXXXXXXXRRLGQADIRGVCVWGNHSNSQVPDASAVEFFVDG 237          
BLAST of mRNA_H-paniculata_contig9075.16909.1 vs. uniprot
Match: A0A097IUP6_SACJA (Malate dehydrogenase n=2 Tax=Saccharina TaxID=309357 RepID=A0A097IUP6_SACJA)

HSP 1 Score: 201 bits (510), Expect = 4.350e-59
Identity = 115/231 (49.78%), Postives = 143/231 (61.90%), Query Frame = 0
Query:    8 VAITGGAGQIAYALLPLIMQGRVFGEGRRVHLRLLDIDPCAGVLEGVAMEIRDCCCDLARFFRLVTEVVVTTDPKIAFQGADAVVLLGGFPRLPGMERRDLIAKNVPIMAEHGKEIAECASKSVRVLVVANPACTNCLVASACAPSIPKSQFSSLSRLDHDRLSAMLAEEISADLHDGVAAVTRADSNGRRQPSFAGKTTGFLEIRNVCLWGNHSPTMWPDVSMAEARIPG 238
            V +TGGAGQIAY+L+PLI +G VFG G RVHLRLLDI P A  LEGVAME++D     + F  ++  V+ TTD   AF GA   +LLGGFPR PGMER DLI KN  IM   G+ +   A  + +V+VVANPA TNCLV S+ APS+ +   S LSRLDHDR+  ML  E +  L   V+A    D+  R       +  G  ++R  C+WGNHS +  PD S  E  I G
Sbjct:    6 VVVTGGAGQIAYSLVPLIARGLVFGPGVRVHLRLLDIPPAANALEGVAMEVQD-----SLFSTVLDGVLATTDEAQAFDGAQVAILLGGFPRRPGMERGDLIGKNASIMKRMGEALERYACHNCKVVVVANPAPTNCLVLSSHAPSLSRRNISCLSRLDHDRMVGMLLHEANRSLSAPVSA-GGGDAGAR-----GWRRLGPADVRGACVWGNHSNSQVPDASAVEFLIDG 225          
BLAST of mRNA_H-paniculata_contig9075.16909.1 vs. uniprot
Match: A0A097IUM7_UNDPI (Malate dehydrogenase n=1 Tax=Undaria pinnatifida TaxID=74381 RepID=A0A097IUM7_UNDPI)

HSP 1 Score: 201 bits (510), Expect = 4.930e-59
Identity = 117/232 (50.43%), Postives = 146/232 (62.93%), Query Frame = 0
Query:   10 ITGGAGQIAYALLPLIMQGRVFGEGRRVHLRLLDIDPCAGVLEGVAMEIRDCCCDLARFFRLVTEVVVTTDPKIAFQGADAVVLLGGFPRLPGMERRDLIAKNVPIMAEHGKEIAECASKSVRVLVVANPACTNCLVASACAPSIPKSQFSSLSRLDHDRLSAMLAEEISA--DLHDGVAAVTRADSNGRRQPSFAG---KTTGFLEIRNVCLWGNHSPTMWPDVSMAEARI 236
            +TGGAGQIAY+L+PLI +G VFG G RVHLRLLDI P A  L+GVAMEI+D     + F  ++  V+ TTD   AF+GA+  +LLGGFPR PGMER DLI KN  IM + G+ +   A    +V+VVANPA TNC+V S+ APSIP+   + LSRLDHDR+  ML  E +    L D  +A       G      AG   +  G  +IR  C+WGNHS +  PDVS AE  I
Sbjct:    8 VTGGAGQIAYSLIPLIARGLVFGPGVRVHLRLLDIPPAANALDGVAMEIQD-----SLFSTVLDGVLATTDEGKAFEGAEVAILLGGFPRRPGMERGDLIGKNAGIMKKMGQALERYADHGCKVVVVANPAPTNCVVLSSHAPSIPRKNITCLSRLDHDRMIGMLLAEANRLLSLQDDNSA------GGNXXXXXAGARERKLGPADIRGACVWGNHSNSQVPDVSSAELFI 228          
BLAST of mRNA_H-paniculata_contig9075.16909.1 vs. uniprot
Match: A0A097IUJ7_SCYLO (Malate dehydrogenase n=1 Tax=Scytosiphon lomentaria TaxID=27967 RepID=A0A097IUJ7_SCYLO)

HSP 1 Score: 201 bits (511), Expect = 6.140e-59
Identity = 116/230 (50.43%), Postives = 144/230 (62.61%), Query Frame = 0
Query:    8 VAITGGAGQIAYALLPLIMQGRVFGEGRRVHLRLLDIDPCAGVLEGVAMEIRDCCCDLARFFRLVTEVVVTTDPKIAFQGADAVVLLGGFPRLPGMERRDLIAKNVPIMAEHGKEIAECASKSVRVLVVANPACTNCLVASACAPSIPKSQFSSLSRLDHDRLSAMLAEEISADLHDGVAAVTRAD----SNGRRQPSFAGKTTGFLEIRNVCLWGNHSPTMWPDVSMAE 233
            V +TGGAGQIAY+L+PLI +G VFG   RV+LRLLDI P A  LEGVAMEI+D     + F  ++  VV TTD   AF+GA   +LLGGFPR PGMER DLI KN  IM   G+ +   A ++ +VLVVANPA TNC+V ++ APSIP+   S LSRLDHDR+  ML  E +  L +   +V        SNG        +  G  +IR VC+WGNHS +  PD S  E
Sbjct:    9 VVVTGGAGQIAYSLIPLIARGLVFGTDTRVNLRLLDIPPSATALEGVAMEIQD-----SLFLTVLDGVVATTDEAKAFEGAQVAILLGGFPRRPGMERGDLIGKNAGIMKRMGEALERYAGRNCKVLVVANPAPTNCIVLASHAPSIPRKNISCLSRLDHDRMVGMLLHEANRCLGEASGSVRNGTVDWVSNGGGGSC---RRLGPTDIRGVCVWGNHSNSQVPDASAVE 230          
BLAST of mRNA_H-paniculata_contig9075.16909.1 vs. uniprot
Match: A0A6H5KVV0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVV0_9PHAE)

HSP 1 Score: 201 bits (510), Expect = 8.440e-59
Identity = 115/231 (49.78%), Postives = 148/231 (64.07%), Query Frame = 0
Query:    8 VAITGGAGQIAYALLPLIMQGRVFGEGRRVHLRLLDIDPCAGVLEGVAMEIRDCCCDLARFFRLVTEVVVTTDPKIAFQGADAVVLLGGFPRLPGMERRDLIAKNVPIMAEHGKEIAECASKSVRVLVVANPACTNCLVASACAPSIPKSQFSSLSRLDHDRLSAMLAEEISADLHDGVAAVTRADSNGRRQPSFAGKTTGFLEIRNVCLWGNHSPTMWPDVSMAEARIPG 238
            V +TGGAGQIAY+L+PLI +G VFG   RV+LRLLDI P A  LEGVAME++D     + F   +  V+ TTD   AF GA   +LLGGFPR PGMER DLI KN  IM   G  + + AS++ +V+VVANPA TNC+V ++ APSIP+   S LSRLDHDR++ ML  E +  L     A   A+ NG  +   + +  G  ++R VC+WGNHS +  PD S  E R+ G
Sbjct:   10 VVVTGGAGQIAYSLIPLIARGLVFGPRTRVNLRLLDIPPSALALEGVAMEVQD-----SLFSTALDGVLATTDEAKAFDGAQVAILLGGFPRRPGMERGDLIEKNAGIMKRMGCCLEKYASRNCKVVVVANPAPTNCVVLASYAPSIPRKNISCLSRLDHDRMAGMLLHEANRCL-----AAAAANGNGSAKGG-SWQRLGPADVRGVCVWGNHSNSQVPDASAVEFRVNG 229          
BLAST of mRNA_H-paniculata_contig9075.16909.1 vs. uniprot
Match: H3G9V6_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G9V6_PHYRM)

HSP 1 Score: 197 bits (502), Expect = 1.320e-58
Identity = 108/231 (46.75%), Postives = 143/231 (61.90%), Query Frame = 0
Query:    8 VAITGGAGQIAYALLPLIMQGRVFGEGRRVHLRLLDIDPCAGVLEGVAMEIRDCCCDLARFFRLVTEVVVTTDPKIAFQGADAVVLLGGFPRLPGMERRDLIAKNVPIMAEHGKEIAECASKSVRVLVVANPACTNCLVASACAPSIPKSQFSSLSRLDHDRLSAMLAEEISADLHDGVAAVTRADSNGRRQPSFAGKTTGFLEIRNVCLWGNHSPTMWPDVSMAEARIPG 238
            + ++G AGQIAY+LLPL+  G VFG  +RV LRLLDI P    LEGV ME++DC       F LV  ++ T D ++AF+ AD  +L+GGFPR  GM+R+DLI KNV I    G  I + AS++V+VLVVANPA TNCL+A   APSIP+  FS+L+RLDH+RL + L E+++A     V A                      ++  V +WGNHS T  PDV+ AE  +PG
Sbjct:    6 IVVSGAAGQIAYSLLPLLCIGHVFGPEQRVELRLLDIAPAQEALEGVKMELQDCA------FNLVDAIIPTADLEVAFKDADVAILVGGFPRKQGMQRKDLIEKNVAIFKAQGAAIEQFASRNVKVLVVANPANTNCLIAMENAPSIPRRNFSALTRLDHERLRSFLVEKVNATQSHKVTA---------------------KDVTKVVIWGNHSSTQVPDVTYAEVALPG 209          
BLAST of mRNA_H-paniculata_contig9075.16909.1 vs. uniprot
Match: A0A097IUK3_9PHAE (Malate dehydrogenase n=1 Tax=Dictyopteris undulata TaxID=156997 RepID=A0A097IUK3_9PHAE)

HSP 1 Score: 198 bits (504), Expect = 4.480e-58
Identity = 113/231 (48.92%), Postives = 147/231 (63.64%), Query Frame = 0
Query:    8 VAITGGAGQIAYALLPLIMQGRVFGEGRRVHLRLLDIDPCAGVLEGVAMEIRDCCCDLARFFRLVTEVVVTTDPKIAFQGADAVVLLGGFPRLPGMERRDLIAKNVPIMAEHGKEIAECASKSVRVLVVANPACTNCLVASACAPSIPKSQFSSLSRLDHDRLSAMLAEEISADLHDGVAAVTRADSNGRRQPSFAGKTTGFLEIRNVCLWGNHSPTMWPDVSMAEARIPG 238
            V +TGGAGQIAY+L+PLI +G VFG   RVHLRLLDI P A  LE + MEI+D     + F   +  V+ TTD   AF+GA   +LLGGFPR PGMER  L+AKNV IM   G+ +   AS+  + LVVANPA TNCLV +A APS+P+  FS LSRLDH+R+  ML E+ ++ L  G A  + A  + R +P+         ++R +C+WGNHS +  PD S  E  + G
Sbjct:    6 VVVTGGAGQIAYSLIPLIARGLVFGPATRVHLRLLDIPPAAQALEAIVMEIQD-----SLFPTALEGVLGTTDEVRAFEGAQVAILLGGFPRKPGMERGQLMAKNVGIMKRMGQLLERHASRDCKALVVANPAATNCLVLAANAPSLPRKNFSFLSRLDHERMVGMLLEKANSVLAAGTA--SHAVRSERLRPA---------DVRGLCIWGNHSDSQVPDASSVEFCLNG 220          
BLAST of mRNA_H-paniculata_contig9075.16909.1 vs. uniprot
Match: K3WQW7_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WQW7_GLOUD)

HSP 1 Score: 196 bits (498), Expect = 5.250e-58
Identity = 107/230 (46.52%), Postives = 140/230 (60.87%), Query Frame = 0
Query:    8 VAITGGAGQIAYALLPLIMQGRVFGEGRRVHLRLLDIDPCAGVLEGVAMEIRDCCCDLARFFRLVTEVVVTTDPKIAFQGADAVVLLGGFPRLPGMERRDLIAKNVPIMAEHGKEIAECASKSVRVLVVANPACTNCLVASACAPSIPKSQFSSLSRLDHDRLSAMLAEEISADLHDGVAAVTRADSNGRRQPSFAGKTTGFLEIRNVCLWGNHSPTMWPDVSMAEARIP 237
            + ++G AGQIAY+LLPLI  G VFG  RRV LRLLDI      LEGV ME++DC       F LV E+  T+D ++AF+  D  +L+GGFPR  GM+R+DLI KNV I    G+ I + AS+ V+VLVVANPA TNCL+A   APSIP+  FS+L+RLDH+RL + L E ++A                      +G T    ++R   +WGNHS T  PDVS  +  +P
Sbjct:    7 IVVSGAAGQIAYSLLPLICIGHVFGPTRRVSLRLLDIPVAQEALEGVKMELQDCA------FNLVDEITPTSDLELAFKDVDVAILVGGFPRKQGMQRKDLIEKNVTIFKAQGEAIEKYASRDVKVLVVANPANTNCLIAMENAPSIPRHNFSALTRLDHERLRSFLVERVNA----------------------SGNTVTSKDVRKCIIWGNHSSTQVPDVSFVDVHVP 208          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9075.16909.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FYH6_ECTSI2.720e-7455.97Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7FQW1_ECTSI4.420e-6148.92Malate dehydrogenase n=1 Tax=Ectocarpus siliculosu... [more]
A0A097IUL1_9PHAE2.530e-5948.72Malate dehydrogenase n=1 Tax=Scytosiphon dotyi Tax... [more]
A0A097IUP6_SACJA4.350e-5949.78Malate dehydrogenase n=2 Tax=Saccharina TaxID=3093... [more]
A0A097IUM7_UNDPI4.930e-5950.43Malate dehydrogenase n=1 Tax=Undaria pinnatifida T... [more]
A0A097IUJ7_SCYLO6.140e-5950.43Malate dehydrogenase n=1 Tax=Scytosiphon lomentari... [more]
A0A6H5KVV0_9PHAE8.440e-5949.78Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
H3G9V6_PHYRM1.320e-5846.75Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A097IUK3_9PHAE4.480e-5848.92Malate dehydrogenase n=1 Tax=Dictyopteris undulata... [more]
K3WQW7_GLOUD5.250e-5846.52Uncharacterized protein n=1 Tax=Globisporangium ul... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.720coord: 1..161
e-value: 1.4E-49
score: 169.9
NoneNo IPR availableTMHMMTMhelixcoord: 5..27
IPR015955Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminalGENE3D3.90.110.10coord: 162..238
e-value: 6.9E-10
score: 40.8
IPR001236Lactate/malate dehydrogenase, N-terminalPFAMPF00056Ldh_1_Ncoord: 8..157
e-value: 5.1E-28
score: 97.9
IPR010945Malate dehydrogenase, type 2PANTHERPTHR23382MALATE DEHYDROGENASEcoord: 6..233
IPR036291NAD(P)-binding domain superfamilySUPERFAMILY51735NAD(P)-binding Rossmann-fold domainscoord: 8..160

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig9075contigH-paniculata_contig9075:213..6387 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig9075.16909.1mRNA_H-paniculata_contig9075.16909.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig9075 213..6387 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig9075.16909.1 ID=prot_H-paniculata_contig9075.16909.1|Name=mRNA_H-paniculata_contig9075.16909.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=238bp
MDEDVVCVAITGGAGQIAYALLPLIMQGRVFGEGRRVHLRLLDIDPCAGV
LEGVAMEIRDCCCDLARFFRLVTEVVVTTDPKIAFQGADAVVLLGGFPRL
PGMERRDLIAKNVPIMAEHGKEIAECASKSVRVLVVANPACTNCLVASAC
APSIPKSQFSSLSRLDHDRLSAMLAEEISADLHDGVAAVTRADSNGRRQP
SFAGKTTGFLEIRNVCLWGNHSPTMWPDVSMAEARIPG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015955Lactate_DH/Glyco_Ohase_4_C
IPR001236Lactate/malate_DH_N
IPR010945Malate_DH_type2
IPR036291NAD(P)-bd_dom_sf