prot_H-paniculata_contig9073.16908.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig9073.16908.1
Unique Nameprot_H-paniculata_contig9073.16908.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length305
Homology
BLAST of mRNA_H-paniculata_contig9073.16908.1 vs. uniprot
Match: A0A6H5JLI6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLI6_9PHAE)

HSP 1 Score: 160 bits (406), Expect = 1.270e-40
Identity = 131/379 (34.56%), Postives = 170/379 (44.85%), Query Frame = 0
Query:    4 RECEVRVCQARHLTARNGAEYANKRDKRPQVTAMCVQVLITHDGRHVPTELCRNIESPYWQKIASFPL--------VLRDSVEEPEGISEESSGMKRHMEVEHENKEEQVMQ------------------------------------SLNPFA-------------KNFVPPESMPTQPAPPXXXXXR------PVMVDGPLRTSVVVHFHVLSDNLISRELIGDVAVDLVPILETADKKMSVLATDRLGHVEE------------NVQLAGLRADATIATDTWVPLRQTNGELRIQMLIKPESDGRASSAGFLTRPQ--GFLLPTAEFDMMAREGMVKVSVPASHGSLDKRLLEVQEQYDFSAARGYREGTPDQDAG 305
            R+CEVRVCQARHL  +      N  DK   + A  V  L++ DG H  TE CRNIE P W+++A F L        + R +  +P   S  ++G                                                      SLNPFA              NFVPP + P    PP     R      P      LR S+V+H  VL   L S+E++GDVAVDLVP+L +   +   LATDRL  +EE            +  +        +A DTWV LRQ   ELR+Q+L+K   +  +S+ G   R Q  G     A FD ++ +G+VK S+     SLD+RLLEVQE YDFSA  GYREG PD+D G
Sbjct:    6 RQCEVRVCQARHLVPKGRKR--NGDDKPAVLVADAVWALMSIDGVHNTTESCRNIEHPSWERVAVFDLNLCRAAEGIARGAPVKPPRDSNPTAGAXXXXXXXXXXXXXXXXXFERPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLNPFAVAEAETQXXXXFASNFVPPAATPLSSPPPQAASPRSKSSCPPAAAAWVLRASMVLHLRVLHGRLRSKEVLGDVAVDLVPLLRSGGDR---LATDRLEWLEEEDGAPLLPLGNGDAGVITTHPPPVVAVDTWVSLRQGTAELRVQILMKTPREPASSNVGS-QRAQVGGDEAWAAAFDALSADGLVKTSLDLEQRSLDERLLEVQETYDFSAGSGYREGKPDEDEG 378          
BLAST of mRNA_H-paniculata_contig9073.16908.1 vs. uniprot
Match: A0A836CAD2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAD2_9STRA)

HSP 1 Score: 67.8 bits (164), Expect = 6.180e-9
Identity = 74/268 (27.61%), Postives = 106/268 (39.55%), Query Frame = 0
Query:   37 MCVQVLITHDGRHVPTELCRNIESPYWQKIASFPL---------VLRDSVEEPEGISEESSGMKRHMEVEHENKEEQVMQ-SLNPFAKNFVPPESMP-TQPAPPXXXXXRPVMVDGPLRTSVVVHFHVLSDNLISRELIGDVAVDLVPILETADKKMSVLATDRLG-------------------------------------HVEENVQLAGLRADAT--------IATDTWVPLRQTNGELRIQMLIKPE-SDGRASSAGFLTRPQ 247
            +CV   IT   +HV TE C +++ P W K+ASF                  EP   + E + M R M +     E    Q  L P +    PP +    Q              D   R   + H  V SD+L+S++L+G+V VD+  ++ T     ++L TDR+G                                     H  E V   G  A A         +A DTWV LRQ +GELR+Q+L++P+ S   A+ A  L R Q
Sbjct:   60 LCVS--ITLGDKHVLTEQCADLQRPVWDKVASFTYDPCPPPADAAAAPHEVEPSAAAVEMTDMFRAMGLPSRAAEPHDQQLPLEPHSGKPSPPAAAAGLQQLSASATAGAAPTADAHARRRAL-HLRVFSDSLVSKDLLGEVTVDVAALVATGG---ALLVTDRIGYTDSGGAGSRGEEDDGDSSGAFMVPLALAASPTPPRSHHSERVSANGAAAAAVASAVDFEPLAVDTWVALRQGDGELRVQVLVRPDPSAATAALAAALLRDQ 321          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9073.16908.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JLI6_9PHAE1.270e-4034.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CAD2_9STRA6.180e-927.61Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig9073contigH-paniculata_contig9073:8212..9402 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig9073.16908.1mRNA_H-paniculata_contig9073.16908.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig9073 8212..9402 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig9073.16908.1 ID=prot_H-paniculata_contig9073.16908.1|Name=mRNA_H-paniculata_contig9073.16908.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=305bp
MLYRECEVRVCQARHLTARNGAEYANKRDKRPQVTAMCVQVLITHDGRHV
PTELCRNIESPYWQKIASFPLVLRDSVEEPEGISEESSGMKRHMEVEHEN
KEEQVMQSLNPFAKNFVPPESMPTQPAPPPSPPPRPVMVDGPLRTSVVVH
FHVLSDNLISRELIGDVAVDLVPILETADKKMSVLATDRLGHVEENVQLA
GLRADATIATDTWVPLRQTNGELRIQMLIKPESDGRASSAGFLTRPQGFL
LPTAEFDMMAREGMVKVSVPASHGSLDKRLLEVQEQYDFSAARGYREGTP
DQDAG
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