prot_H-paniculata_contig9071.16906.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig9071.16906.1
Unique Nameprot_H-paniculata_contig9071.16906.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length97
Homology
BLAST of mRNA_H-paniculata_contig9071.16906.1 vs. uniprot
Match: D8LNP1_ECTSI (Acyl-CoA dehydrogenase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNP1_ECTSI)

HSP 1 Score: 173 bits (438), Expect = 1.310e-50
Identity = 87/95 (91.58%), Postives = 93/95 (97.89%), Query Frame = 0
Query:    1 MSVKLDAARLLTWRAAAARDKGENYTKEAAMAKLFASEAATFCSHAAIQILGGMGYVSEMPAERHYRDARITEIYEGTSEIQHLVIAGSVLKEYS 95
            MS+KLDAARLLTW+AAAARD GENYTKEAAMAKLFASE ATFCSHAAIQ+LGGMGYVSEMPAERHYRDARITEIYEGTSEIQH+VIAGSV+KEY+
Sbjct:  318 MSMKLDAARLLTWKAAAARDAGENYTKEAAMAKLFASETATFCSHAAIQVLGGMGYVSEMPAERHYRDARITEIYEGTSEIQHMVIAGSVVKEYN 412          
BLAST of mRNA_H-paniculata_contig9071.16906.1 vs. uniprot
Match: A0A836C965_9STRA (Acyl-CoA dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C965_9STRA)

HSP 1 Score: 154 bits (390), Expect = 8.490e-44
Identity = 77/94 (81.91%), Postives = 87/94 (92.55%), Query Frame = 0
Query:    1 MSVKLDAARLLTWRAAAARDKGENYTKEAAMAKLFASEAATFCSHAAIQILGGMGYVSEMPAERHYRDARITEIYEGTSEIQHLVIAGSVLKEY 94
            M+ ++DAARLLTWRAAA +D G +YT+EAA AKL ASEAATFC+H AIQ+LGGMGYVSEMPAERHYRDARITEIYEGTSEIQHLVIAG++LKEY
Sbjct:  279 MANRVDAARLLTWRAAATKDAGRSYTREAAQAKLVASEAATFCAHQAIQVLGGMGYVSEMPAERHYRDARITEIYEGTSEIQHLVIAGALLKEY 372          
BLAST of mRNA_H-paniculata_contig9071.16906.1 vs. uniprot
Match: A0A7S1D9M2_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D9M2_CYCTE)

HSP 1 Score: 150 bits (379), Expect = 3.270e-43
Identity = 78/96 (81.25%), Postives = 84/96 (87.50%), Query Frame = 0
Query:    1 MSVKLDAARLLTWRAAAARDKGENYTKEAAMAKLFASEAATFCSHAAIQILGGMGYVSEMPAERHYRDARITEIYEGTSEIQHLVIAGSVLKEYSN 96
            M V  DAARLLTWRAA  +D GE +T+EAAMAKL ASEAAT CSH AIQILGGMGYVS+MPAER+YRDARITEIYEGTSEIQHLVIAG VLKEY +
Sbjct:  177 MVVARDAARLLTWRAAQLKDNGERFTREAAMAKLAASEAATMCSHQAIQILGGMGYVSDMPAERYYRDARITEIYEGTSEIQHLVIAGDVLKEYKS 272          
BLAST of mRNA_H-paniculata_contig9071.16906.1 vs. uniprot
Match: A0A7S4FFB3_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4FFB3_9EUGL)

HSP 1 Score: 152 bits (385), Expect = 1.360e-42
Identity = 76/94 (80.85%), Postives = 86/94 (91.49%), Query Frame = 0
Query:    1 MSVKLDAARLLTWRAAAARDKGENYTKEAAMAKLFASEAATFCSHAAIQILGGMGYVSEMPAERHYRDARITEIYEGTSEIQHLVIAGSVLKEY 94
            M  KL +ARLLTW AA A+DKG++++KEAAMAKL ASEAATFCSH AIQ+LGGMGYVS+MPAERHYRDARITEIYEGTSEIQHLVIAG++LK Y
Sbjct:  322 MECKLQSARLLTWNAAMAKDKGDDFSKEAAMAKLVASEAATFCSHRAIQVLGGMGYVSDMPAERHYRDARITEIYEGTSEIQHLVIAGNLLKHY 415          
BLAST of mRNA_H-paniculata_contig9071.16906.1 vs. uniprot
Match: A0A7S2Y3T6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y3T6_9STRA)

HSP 1 Score: 143 bits (360), Expect = 1.570e-42
Identity = 71/93 (76.34%), Postives = 84/93 (90.32%), Query Frame = 0
Query:    1 MSVKLDAARLLTWRAAAARDKGENYTKEAAMAKLFASEAATFCSHAAIQILGGMGYVSEMPAERHYRDARITEIYEGTSEIQHLVIAGSVLKE 93
            M++K++AARLLTW+AA  +D  E ++KEAAMAKLFASE ATFC+H AIQ+LGGMGYVS+MPAERHYRDARITEIYEGTSEIQ +VIA +VLKE
Sbjct:    8 MAMKIEAARLLTWKAAVLKDNKEPFSKEAAMAKLFASETATFCAHQAIQVLGGMGYVSDMPAERHYRDARITEIYEGTSEIQRVVIASNVLKE 100          
BLAST of mRNA_H-paniculata_contig9071.16906.1 vs. uniprot
Match: A0A7S1V5S8_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1V5S8_9STRA)

HSP 1 Score: 152 bits (385), Expect = 1.630e-42
Identity = 78/96 (81.25%), Postives = 85/96 (88.54%), Query Frame = 0
Query:    1 MSVKLDAARLLTWRAAAARDKGENYTKEAAMAKLFASEAATFCSHAAIQILGGMGYVSEMPAERHYRDARITEIYEGTSEIQHLVIAGSVLKEYSN 96
            M+V  D+ARLLTWRAA  +D G+ +T+EAAMAKL ASEAAT CSH AIQILGGMGYV+EMPAERHYRDARITEIYEGTSEIQHLVIAG VLKEY N
Sbjct:  343 MTVARDSARLLTWRAAQLKDAGKRFTREAAMAKLAASEAATMCSHQAIQILGGMGYVTEMPAERHYRDARITEIYEGTSEIQHLVIAGDVLKEYKN 438          
BLAST of mRNA_H-paniculata_contig9071.16906.1 vs. uniprot
Match: UPI001C9C5595 (short-chain specific acyl-CoA dehydrogenase, mitochondrial isoform X1 n=3 Tax=Venturia canescens TaxID=32260 RepID=UPI001C9C5595)

HSP 1 Score: 151 bits (381), Expect = 3.310e-42
Identity = 76/94 (80.85%), Postives = 86/94 (91.49%), Query Frame = 0
Query:    1 MSVKLDAARLLTWRAAAARDKGENYTKEAAMAKLFASEAATFCSHAAIQILGGMGYVSEMPAERHYRDARITEIYEGTSEIQHLVIAGSVLKEY 94
            M++KL++ARLLTWRAA  +D G+ YTKEAAMAKL ASE ATFCSH +IQILGGMGYVS+MPAERHYRDARITEIYEGTSEIQ LVIAGS++KEY
Sbjct:  310 MAMKLESARLLTWRAAYLKDNGKPYTKEAAMAKLAASETATFCSHQSIQILGGMGYVSDMPAERHYRDARITEIYEGTSEIQRLVIAGSIIKEY 403          
BLAST of mRNA_H-paniculata_contig9071.16906.1 vs. uniprot
Match: UPI001C058868 (short-chain specific acyl-CoA dehydrogenase, mitochondrial-like n=1 Tax=Melanotaenia boesemani TaxID=1250792 RepID=UPI001C058868)

HSP 1 Score: 142 bits (357), Expect = 3.990e-42
Identity = 71/94 (75.53%), Postives = 84/94 (89.36%), Query Frame = 0
Query:    1 MSVKLDAARLLTWRAAAARDKGENYTKEAAMAKLFASEAATFCSHAAIQILGGMGYVSEMPAERHYRDARITEIYEGTSEIQHLVIAGSVLKEY 94
            M+V +++ARLLTW+A+  RD  + +TKEAAMAKL ASEAATFC+H AIQILGGMG+V++MPAERHYRDARITEIYEGTSEIQ LVIAG +LKEY
Sbjct:    1 MAVAIESARLLTWKASLLRDSKKPFTKEAAMAKLAASEAATFCAHQAIQILGGMGFVTDMPAERHYRDARITEIYEGTSEIQRLVIAGQILKEY 94          
BLAST of mRNA_H-paniculata_contig9071.16906.1 vs. uniprot
Match: UPI000614B252 (short-chain specific acyl-CoA dehydrogenase, mitochondrial n=1 Tax=Megachile rotundata TaxID=143995 RepID=UPI000614B252)

HSP 1 Score: 150 bits (380), Expect = 4.840e-42
Identity = 75/95 (78.95%), Postives = 87/95 (91.58%), Query Frame = 0
Query:    1 MSVKLDAARLLTWRAAAARDKGENYTKEAAMAKLFASEAATFCSHAAIQILGGMGYVSEMPAERHYRDARITEIYEGTSEIQHLVIAGSVLKEYS 95
            M++K++++RLLTWRAA  +D GE YTKEAAMAKL ASEAATFCSH  IQILGGMGYV++MPAERHYRDARITEIYEGTSEIQ LVIAG+V+KEY+
Sbjct:  312 MALKVESSRLLTWRAAVLKDNGEPYTKEAAMAKLSASEAATFCSHQCIQILGGMGYVTDMPAERHYRDARITEIYEGTSEIQRLVIAGNVIKEYN 406          
BLAST of mRNA_H-paniculata_contig9071.16906.1 vs. uniprot
Match: A0A7S0BYY7_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0BYY7_9STRA)

HSP 1 Score: 147 bits (370), Expect = 6.330e-42
Identity = 75/96 (78.12%), Postives = 84/96 (87.50%), Query Frame = 0
Query:    1 MSVKLDAARLLTWRAAAARDKGENYTKEAAMAKLFASEAATFCSHAAIQILGGMGYVSEMPAERHYRDARITEIYEGTSEIQHLVIAGSVLKEYSN 96
            M +  D+ARLLTWRAA+ +D  E +T+EAAMAKL ASEAAT CSH AIQILGGMGYV+EMPAERHYRDARITEIYEGTSEIQHLVIAG V+KEY +
Sbjct:  171 MVMARDSARLLTWRAASLKDAKEKFTREAAMAKLAASEAATMCSHQAIQILGGMGYVTEMPAERHYRDARITEIYEGTSEIQHLVIAGDVIKEYKS 266          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9071.16906.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LNP1_ECTSI1.310e-5091.58Acyl-CoA dehydrogenase n=2 Tax=Ectocarpus TaxID=28... [more]
A0A836C965_9STRA8.490e-4481.91Acyl-CoA dehydrogenase n=1 Tax=Tribonema minus Tax... [more]
A0A7S1D9M2_CYCTE3.270e-4381.25Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A7S4FFB3_9EUGL1.360e-4280.85Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
A0A7S2Y3T6_9STRA1.570e-4276.34Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A7S1V5S8_9STRA1.630e-4281.25Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
UPI001C9C55953.310e-4280.85short-chain specific acyl-CoA dehydrogenase, mitoc... [more]
UPI001C0588683.990e-4275.53short-chain specific acyl-CoA dehydrogenase, mitoc... [more]
UPI000614B2524.840e-4278.95short-chain specific acyl-CoA dehydrogenase, mitoc... [more]
A0A7S0BYY7_9STRA6.330e-4278.13Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.140.10coord: 1..95
e-value: 1.4E-33
score: 117.8
NoneNo IPR availablePANTHERPTHR43884FAMILY NOT NAMEDcoord: 1..93
NoneNo IPR availablePANTHERPTHR43884:SF12SHORT-CHAIN SPECIFIC ACYL-COA DEHYDROGENASE, MITOCHONDRIALcoord: 1..93
IPR009075Acyl-CoA dehydrogenase/oxidase C-terminalPFAMPF00441Acyl-CoA_dh_1coord: 1..90
e-value: 1.2E-29
score: 103.5
IPR006089Acyl-CoA dehydrogenase, conserved sitePROSITEPS00073ACYL_COA_DH_2coord: 49..68
IPR036250Acyl-CoA dehydrogenase-like, C-terminalSUPERFAMILY47203Acyl-CoA dehydrogenase C-terminal domain-likecoord: 1..94

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig9071contigH-paniculata_contig9071:7207..8996 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig9071.16906.1mRNA_H-paniculata_contig9071.16906.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig9071 5571..9014 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig9071.16906.1 ID=prot_H-paniculata_contig9071.16906.1|Name=mRNA_H-paniculata_contig9071.16906.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=97bp
MSVKLDAARLLTWRAAAARDKGENYTKEAAMAKLFASEAATFCSHAAIQI
LGGMGYVSEMPAERHYRDARITEIYEGTSEIQHLVIAGSVLKEYSN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009075AcylCo_DH/oxidase_C
IPR006089Acyl-CoA_DH_CS
IPR036250AcylCo_DH-like_C