mRNA_H-paniculata_contig9071.16906.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig9071.16906.1 vs. uniprot
Match: D8LNP1_ECTSI (Acyl-CoA dehydrogenase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNP1_ECTSI) HSP 1 Score: 181 bits (460), Expect = 2.620e-47 Identity = 92/101 (91.09%), Postives = 98/101 (97.03%), Query Frame = 1
Query: 1 QHKISEMSVKLDAARLLTWRAAAARDKGENYTKEAAMAKLFASEAATFCSHAAIQILGGMGYVSEMPAERHYRDARITEIYEGTSEIQHLVIAGSVLKEYS 303
Q KISEMS+KLDAARLLTW+AAAARD GENYTKEAAMAKLFASE ATFCSHAAIQ+LGGMGYVSEMPAERHYRDARITEIYEGTSEIQH+VIAGSV+KEY+
Sbjct: 312 QSKISEMSMKLDAARLLTWKAAAARDAGENYTKEAAMAKLFASETATFCSHAAIQVLGGMGYVSEMPAERHYRDARITEIYEGTSEIQHMVIAGSVVKEYN 412
BLAST of mRNA_H-paniculata_contig9071.16906.1 vs. uniprot
Match: A0A836C965_9STRA (Acyl-CoA dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C965_9STRA) HSP 1 Score: 165 bits (417), Expect = 1.240e-41 Identity = 81/102 (79.41%), Postives = 93/102 (91.18%), Query Frame = 1
Query: 1 QHKISEMSVKLDAARLLTWRAAAARDKGENYTKEAAMAKLFASEAATFCSHAAIQILGGMGYVSEMPAERHYRDARITEIYEGTSEIQHLVIAGSVLKEYSN 306
QHK+S+M+ ++DAARLLTWRAAA +D G +YT+EAA AKL ASEAATFC+H AIQ+LGGMGYVSEMPAERHYRDARITEIYEGTSEIQHLVIAG++LKEY
Sbjct: 273 QHKLSDMANRVDAARLLTWRAAATKDAGRSYTREAAQAKLVASEAATFCAHQAIQVLGGMGYVSEMPAERHYRDARITEIYEGTSEIQHLVIAGALLKEYKQ 374
BLAST of mRNA_H-paniculata_contig9071.16906.1 vs. uniprot
Match: A0A7S1D9M2_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D9M2_CYCTE) HSP 1 Score: 157 bits (398), Expect = 4.290e-40 Identity = 82/102 (80.39%), Postives = 89/102 (87.25%), Query Frame = 1
Query: 1 QHKISEMSVKLDAARLLTWRAAAARDKGENYTKEAAMAKLFASEAATFCSHAAIQILGGMGYVSEMPAERHYRDARITEIYEGTSEIQHLVIAGSVLKEYSN 306
Q+KIS M V DAARLLTWRAA +D GE +T+EAAMAKL ASEAAT CSH AIQILGGMGYVS+MPAER+YRDARITEIYEGTSEIQHLVIAG VLKEY +
Sbjct: 171 QNKISAMVVARDAARLLTWRAAQLKDNGERFTREAAMAKLAASEAATMCSHQAIQILGGMGYVSDMPAERYYRDARITEIYEGTSEIQHLVIAGDVLKEYKS 272
BLAST of mRNA_H-paniculata_contig9071.16906.1 vs. uniprot
Match: A0A7S0BYY7_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0BYY7_9STRA) HSP 1 Score: 157 bits (396), Expect = 6.950e-40 Identity = 80/102 (78.43%), Postives = 89/102 (87.25%), Query Frame = 1
Query: 1 QHKISEMSVKLDAARLLTWRAAAARDKGENYTKEAAMAKLFASEAATFCSHAAIQILGGMGYVSEMPAERHYRDARITEIYEGTSEIQHLVIAGSVLKEYSN 306
QHKIS M + D+ARLLTWRAA+ +D E +T+EAAMAKL ASEAAT CSH AIQILGGMGYV+EMPAERHYRDARITEIYEGTSEIQHLVIAG V+KEY +
Sbjct: 165 QHKISTMVMARDSARLLTWRAASLKDAKEKFTREAAMAKLAASEAATMCSHQAIQILGGMGYVTEMPAERHYRDARITEIYEGTSEIQHLVIAGDVIKEYKS 266
BLAST of mRNA_H-paniculata_contig9071.16906.1 vs. uniprot
Match: A0A1B6KEZ4_9HEMI (Acyl-CoA_dh_1 domain-containing protein (Fragment) n=1 Tax=Graphocephala atropunctata TaxID=36148 RepID=A0A1B6KEZ4_9HEMI) HSP 1 Score: 151 bits (381), Expect = 1.560e-39 Identity = 76/100 (76.00%), Postives = 89/100 (89.00%), Query Frame = 1
Query: 1 QHKISEMSVKLDAARLLTWRAAAARDKGENYTKEAAMAKLFASEAATFCSHAAIQILGGMGYVSEMPAERHYRDARITEIYEGTSEIQHLVIAGSVLKEY 300
QHKI+ M+++L+AARLLTWRAA +D +++TKEAAMAKL ASEAAT+ SH AIQ+LGGMGYVS+MPAERHYRDARITEIYEGTSEIQ LVIA +V KEY
Sbjct: 30 QHKIANMAMRLEAARLLTWRAAFLKDNNQHFTKEAAMAKLAASEAATYISHQAIQVLGGMGYVSDMPAERHYRDARITEIYEGTSEIQRLVIAANVFKEY 129
BLAST of mRNA_H-paniculata_contig9071.16906.1 vs. uniprot
Match: A0A7S1V5S8_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1V5S8_9STRA) HSP 1 Score: 160 bits (406), Expect = 1.580e-39 Identity = 82/102 (80.39%), Postives = 91/102 (89.22%), Query Frame = 1
Query: 1 QHKISEMSVKLDAARLLTWRAAAARDKGENYTKEAAMAKLFASEAATFCSHAAIQILGGMGYVSEMPAERHYRDARITEIYEGTSEIQHLVIAGSVLKEYSN 306
Q+KIS+M+V D+ARLLTWRAA +D G+ +T+EAAMAKL ASEAAT CSH AIQILGGMGYV+EMPAERHYRDARITEIYEGTSEIQHLVIAG VLKEY N
Sbjct: 337 QNKISKMTVARDSARLLTWRAAQLKDAGKRFTREAAMAKLAASEAATMCSHQAIQILGGMGYVTEMPAERHYRDARITEIYEGTSEIQHLVIAGDVLKEYKN 438
BLAST of mRNA_H-paniculata_contig9071.16906.1 vs. uniprot
Match: U5ERH0_9DIPT (Putative short chain acyl-coa dehydrogen n=1 Tax=Corethrella appendiculata TaxID=1370023 RepID=U5ERH0_9DIPT) HSP 1 Score: 159 bits (402), Expect = 2.610e-39 Identity = 81/101 (80.20%), Postives = 93/101 (92.08%), Query Frame = 1
Query: 1 QHKISEMSVKLDAARLLTWRAAAARDKGENYTKEAAMAKLFASEAATFCSHAAIQILGGMGYVSEMPAERHYRDARITEIYEGTSEIQHLVIAGSVLKEYS 303
Q+KISEM++K+++ARLLTWRAA +D G+ YTKEAAMAKL ASEAATFC+H +IQ LGGMGYVS+MPAERHYRDARITEIYEGTSEIQ LVIAG+VLKEYS
Sbjct: 303 QNKISEMALKVESARLLTWRAAWLKDNGQPYTKEAAMAKLAASEAATFCAHQSIQCLGGMGYVSDMPAERHYRDARITEIYEGTSEIQRLVIAGAVLKEYS 403
BLAST of mRNA_H-paniculata_contig9071.16906.1 vs. uniprot
Match: A0A7S4FFB3_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4FFB3_9EUGL) HSP 1 Score: 159 bits (403), Expect = 3.350e-39 Identity = 80/100 (80.00%), Postives = 91/100 (91.00%), Query Frame = 1
Query: 1 QHKISEMSVKLDAARLLTWRAAAARDKGENYTKEAAMAKLFASEAATFCSHAAIQILGGMGYVSEMPAERHYRDARITEIYEGTSEIQHLVIAGSVLKEY 300
Q K+SEM KL +ARLLTW AA A+DKG++++KEAAMAKL ASEAATFCSH AIQ+LGGMGYVS+MPAERHYRDARITEIYEGTSEIQHLVIAG++LK Y
Sbjct: 316 QLKLSEMECKLQSARLLTWNAAMAKDKGDDFSKEAAMAKLVASEAATFCSHRAIQVLGGMGYVSDMPAERHYRDARITEIYEGTSEIQHLVIAGNLLKHY 415
BLAST of mRNA_H-paniculata_contig9071.16906.1 vs. uniprot
Match: A0A7S2Y3T6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y3T6_9STRA) HSP 1 Score: 149 bits (375), Expect = 4.160e-39 Identity = 73/99 (73.74%), Postives = 89/99 (89.90%), Query Frame = 1
Query: 1 QHKISEMSVKLDAARLLTWRAAAARDKGENYTKEAAMAKLFASEAATFCSHAAIQILGGMGYVSEMPAERHYRDARITEIYEGTSEIQHLVIAGSVLKE 297
Q K+++M++K++AARLLTW+AA +D E ++KEAAMAKLFASE ATFC+H AIQ+LGGMGYVS+MPAERHYRDARITEIYEGTSEIQ +VIA +VLKE
Sbjct: 2 QEKLADMAMKIEAARLLTWKAAVLKDNKEPFSKEAAMAKLFASETATFCAHQAIQVLGGMGYVSDMPAERHYRDARITEIYEGTSEIQRVVIASNVLKE 100
BLAST of mRNA_H-paniculata_contig9071.16906.1 vs. uniprot
Match: UPI001C9C5595 (short-chain specific acyl-CoA dehydrogenase, mitochondrial isoform X1 n=3 Tax=Venturia canescens TaxID=32260 RepID=UPI001C9C5595) HSP 1 Score: 157 bits (398), Expect = 9.890e-39 Identity = 79/100 (79.00%), Postives = 91/100 (91.00%), Query Frame = 1
Query: 1 QHKISEMSVKLDAARLLTWRAAAARDKGENYTKEAAMAKLFASEAATFCSHAAIQILGGMGYVSEMPAERHYRDARITEIYEGTSEIQHLVIAGSVLKEY 300
Q KI++M++KL++ARLLTWRAA +D G+ YTKEAAMAKL ASE ATFCSH +IQILGGMGYVS+MPAERHYRDARITEIYEGTSEIQ LVIAGS++KEY
Sbjct: 304 QQKIADMAMKLESARLLTWRAAYLKDNGKPYTKEAAMAKLAASETATFCSHQSIQILGGMGYVSDMPAERHYRDARITEIYEGTSEIQRLVIAGSIIKEY 403 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9071.16906.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig9071.16906.1 >prot_H-paniculata_contig9071.16906.1 ID=prot_H-paniculata_contig9071.16906.1|Name=mRNA_H-paniculata_contig9071.16906.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=97bp MSVKLDAARLLTWRAAAARDKGENYTKEAAMAKLFASEAATFCSHAAIQIback to top mRNA from alignment at H-paniculata_contig9071:5571..9014- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig9071.16906.1 ID=mRNA_H-paniculata_contig9071.16906.1|Name=mRNA_H-paniculata_contig9071.16906.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3444bp|location=Sequence derived from alignment at H-paniculata_contig9071:5571..9014- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig9071:5571..9014- >mRNA_H-paniculata_contig9071.16906.1 ID=mRNA_H-paniculata_contig9071.16906.1|Name=mRNA_H-paniculata_contig9071.16906.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=582bp|location=Sequence derived from alignment at H-paniculata_contig9071:5571..9014- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |