prot_H-paniculata_contig9070.16905.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig9070.16905.1
Unique Nameprot_H-paniculata_contig9070.16905.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length230
Homology
BLAST of mRNA_H-paniculata_contig9070.16905.1 vs. uniprot
Match: D8LFQ9_ECTSI (WW domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFQ9_ECTSI)

HSP 1 Score: 181 bits (459), Expect = 1.010e-48
Identity = 102/234 (43.59%), Postives = 131/234 (55.98%), Query Frame = 0
Query:    1 RTQVRRQLFREDAQAKPLVFCPFCGDGVLKSGGLKGHLEGCFVFNRCRGGATHAEVGIAIACVCVWWPPQMRQKECRGTCSSQHN----QEKQVLLSRNVAYAGLPEANASTAXXXXXXXXXXXTGAIAGPSPVKTGSDFAGQHIGDLPNSPIPTVEIPAEISVDEFERCGDCGRTFAPGRLQAHAKACRSVFLERRTPYDPRAMRAKGTPLEFFQQPLEAPVANGSPELPAAG 230
            R +VRRQLF ED++A+PLVFCPFCG+GV+++GGL+ HL+ C+V +RCRG  TH +V +AI  V V            G  +S  N    Q+   LL   +                         G +     V TG    G   G++    +            E ERCGDCGRTFAPGRL++HAKACRSVFLERR PYDP+AMRA+GTPLEFFQQP+ A  ++G+P     G
Sbjct:  903 RHRVRRQLFSEDSEARPLVFCPFCGEGVVRAGGLRDHLQECYVLDRCRGSETHKQVEVAIRAVSVEHQMHTSATNTHGKGASSLNGGSFQDSSTLLQHALPPFVSKGNGPENVLAPAVASENSELGGV-----VATGGG-RGAAAGEVSGVGLEVSLGGGGAGGAEEERCGDCGRTFAPGRLRSHAKACRSVFLERRRPYDPKAMRARGTPLEFFQQPIGAASSDGNPSTSGTG 1130          
BLAST of mRNA_H-paniculata_contig9070.16905.1 vs. uniprot
Match: A0A6H5KQR3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQR3_9PHAE)

HSP 1 Score: 172 bits (435), Expect = 1.370e-46
Identity = 103/234 (44.02%), Postives = 134/234 (57.26%), Query Frame = 0
Query:    1 RTQVRRQLFREDAQAKPLVFCPFCGDGVLKSGGLKGHLEGCFVFNRCRGGATHAEVGIAIACVCVWWPPQMRQKECRGTCSSQHN----QEKQVLL----SRNVAYAGLPE--ANASTAXXXXXXXXXXXTGAIAGPSPVKTGSDFAGQHIGDLPNSPIPTVEIPAEISVD-------EFERCGDCGRTFAPGRLQAHAKACRSVFLERRTPYDPRAMRAKGTPLEFFQQPLEA 217
            R +VRRQLF ED++A+PLVFCPFCG+GV+++ GL+ HL+ C+V +RCRG  TH +V +AI  V V            G  +S  N    Q+   LL    S  V+    PE     + A           TG + G +    G + +G               + +E+S         +FERC DCGRTFAPGRL++HAKACRSVFLERR PYDP+AMRA+GTPLEFFQQP+ A
Sbjct:  105 RHRVRRQLFSEDSEARPLVFCPFCGEGVVRARGLRDHLQECYVLDRCRGSETHKQVEVAIKAVSVENQMHTSATNTHGRRASSLNDGSFQDSSTLLQHALSPFVSKGNDPENVLAPAVASENSELGRVVATGGLRGTA----GGEVSG---------------VSSEVSSGGGGAGGAKFERCEDCGRTFAPGRLRSHAKACRSVFLERRRPYDPKAMRARGTPLEFFQQPIGA 319          
BLAST of mRNA_H-paniculata_contig9070.16905.1 vs. uniprot
Match: A0A835Z7V0_9STRA (WW domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7V0_9STRA)

HSP 1 Score: 66.2 bits (160), Expect = 6.470e-9
Identity = 29/50 (58.00%), Postives = 35/50 (70.00%), Query Frame = 0
Query:  164 ERCGDCGRTFAPGRLQAHAKACRSVFLERRTPYDPRAMRAKGTPLEFFQQ 213
            E+C DCGRTFA GR+ AHA+ CR VF  RR  +D R  R +GTPL F Q+
Sbjct:  786 EQCADCGRTFAEGRIDAHARVCRRVFGARRPVFDGRERRLRGTPLAFMQR 835          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9070.16905.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LFQ9_ECTSI1.010e-4843.59WW domain-containing protein n=1 Tax=Ectocarpus si... [more]
A0A6H5KQR3_9PHAE1.370e-4644.02Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z7V0_9STRA6.470e-958.00WW domain-containing protein n=1 Tax=Tribonema min... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.160.60coord: 165..189
e-value: 3.0E-5
score: 25.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig9070contigH-paniculata_contig9070:1400..6318 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig9070.16905.1mRNA_H-paniculata_contig9070.16905.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig9070 1400..6318 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig9070.16905.1 ID=prot_H-paniculata_contig9070.16905.1|Name=mRNA_H-paniculata_contig9070.16905.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=230bp
RTQVRRQLFREDAQAKPLVFCPFCGDGVLKSGGLKGHLEGCFVFNRCRGG
ATHAEVGIAIACVCVWWPPQMRQKECRGTCSSQHNQEKQVLLSRNVAYAG
LPEANASTAAAAAAAAAAAGTGAIAGPSPVKTGSDFAGQHIGDLPNSPIP
TVEIPAEISVDEFERCGDCGRTFAPGRLQAHAKACRSVFLERRTPYDPRA
MRAKGTPLEFFQQPLEAPVANGSPELPAAG
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