prot_H-paniculata_contig9065.16899.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig9065.16899.1
Unique Nameprot_H-paniculata_contig9065.16899.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length150
Homology
BLAST of mRNA_H-paniculata_contig9065.16899.1 vs. uniprot
Match: D7G122_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G122_ECTSI)

HSP 1 Score: 117 bits (294), Expect = 5.280e-31
Identity = 71/153 (46.41%), Postives = 92/153 (60.13%), Query Frame = 0
Query:    1 ALVDAGEKTGVEVSYCSAYDPT-----GCGSSGCHCGLTRDNDYNSPTSRWSCKYDLIEKDCKVCYTFDEPQDIEELGVSFYKGDKRKRTITLKLDNTNGVDDKTYEFTSSGDSTSYEYFDLSSDETKKLCIEAEDLDSSEWLSIKEVVFLVD 148
            ALVDA ++T V   + +AYD       GC   GC   LTRD  +    SRWSC   L +  CK+ Y F+EPQDI  + + FYKGD+R RT+ LK     G D      TSSG S+ YE +D+++DETK L +EA +LD  EW+SI EV F+VD
Sbjct:    3 ALVDARKRTTVN-KWANAYDDRTSEYGGCDPDGCKASLTRDQSWQDE-SRWSCSEKLEDAQCKITYKFEEPQDIVRIKIKFYKGDERVRTLKLK-----GSDGFEKTITSSGTSSKYETWDINTDETKWLSMEALNLDDDEWISITEVRFMVD 148          
BLAST of mRNA_H-paniculata_contig9065.16899.1 vs. uniprot
Match: A0A6H5L4E8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4E8_9PHAE)

HSP 1 Score: 83.2 bits (204), Expect = 1.060e-15
Identity = 56/148 (37.84%), Postives = 79/148 (53.38%), Query Frame = 0
Query:    1 ALVDAGEKTGVEVSYCSAYDPT-----GCGSSGCHCGLTRDNDYNSPTSRWSCKYDLIEKDCKVCYTFDEPQDIEELGVSFYKGDKRKRTITLKLDNTNGVDDKTYEFTSSGDSTSYEYFDLSSDETKKLCIEAEDLDSSEWLSIKEV 143
            ALVDA ++T V+  + +AYD       GC   GC    TRD  +    SRWSC   L +  C + Y F+EPQDI  + ++     + K+ IT                 SSG S++YE +D+++DETK L +EA +LD  EW+SI EV
Sbjct:  607 ALVDARKRTAVK-KWANAYDDRTSEYGGCDPDGCKASFTRDRSWKDE-SRWSCSEKLEDAQCNITYNFEEPQDIVRIKIN----GEFKKIIT-----------------SSGTSSTYETWDINTDETKWLSMEALNLDDDEWISITEV 731          
BLAST of mRNA_H-paniculata_contig9065.16899.1 vs. uniprot
Match: A0A6H5JFX1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JFX1_9PHAE)

HSP 1 Score: 79.0 bits (193), Expect = 1.630e-14
Identity = 51/146 (34.93%), Postives = 82/146 (56.16%), Query Frame = 0
Query:    5 AGEKTGVEVSYCSAYDPTGCGSSGCHCGLTRDNDYNSPTSRWSCKYDLIEK--DCKVCYTFDEPQDIEELGVSFYKGDKRKRTITLKLDNTNGVDDKTYEFTSSGDSTSYEYFDLSSDETKKLCIEAEDLDSSEWLSIKEVVFLVD 148
            A   TG +     A    GCG  GC   L  D   +   SRWSC  D++     C++ +TF  PQ++++L V F+KG++R RT+ +K+   NG  +K  EF S   S +  YFD+ + +   + +E+  LD+ EW+S+ EV+F+V+
Sbjct:  201 AASATGFDERPGQASGDHGCGKYGCLPVLATDGITDDVESRWSCAEDIVPDGGQCEIEFTFSHPQNLKQLQVDFWKGEERTRTLKVKI---NG--EKFGEFDSHPGSVT-SYFDVIAYDVHTVTLESLGLDTDEWISLLEVIFMVE 340          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9065.16899.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G122_ECTSI5.280e-3146.41Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L4E8_9PHAE1.060e-1537.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JFX1_9PHAE1.630e-1434.93Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008979Galactose-binding-like domain superfamilyGENE3D2.60.120.260coord: 22..147
e-value: 2.6E-5
score: 26.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig9065contigH-paniculata_contig9065:6462..8943 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig9065.16899.1mRNA_H-paniculata_contig9065.16899.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig9065 5585..8943 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig9065.16899.1 ID=prot_H-paniculata_contig9065.16899.1|Name=mRNA_H-paniculata_contig9065.16899.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=150bp
ALVDAGEKTGVEVSYCSAYDPTGCGSSGCHCGLTRDNDYNSPTSRWSCKY
DLIEKDCKVCYTFDEPQDIEELGVSFYKGDKRKRTITLKLDNTNGVDDKT
YEFTSSGDSTSYEYFDLSSDETKKLCIEAEDLDSSEWLSIKEVVFLVDE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008979Galactose-bd-like_sf