prot_H-paniculata_contig9000.16857.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig9000.16857.1
Unique Nameprot_H-paniculata_contig9000.16857.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length217
Homology
BLAST of mRNA_H-paniculata_contig9000.16857.1 vs. uniprot
Match: A0A6H5JZF2_9PHAE (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JZF2_9PHAE)

HSP 1 Score: 117 bits (294), Expect = 5.600e-27
Identity = 72/149 (48.32%), Postives = 89/149 (59.73%), Query Frame = 0
Query:   25 EFTQPLSSASPPSRALSHTPPLLPTHAVENEASALVANPLNEFSLEACRTAVSDRCLEAACSLLHFEIAEVWTYTGDYSAAEGKAVEPMLLHVYTSPATIESFGGKLKGVWSGGGEGARHSLSPSV----RSPCTLSWSRTEYGNRLLH 169
            E+ QPL  A P SR++SHTPPL PT + +   +    +PL +FS +      +D CL A CSLL F+IAEVWTYTGD SAAEGK +EPM LHVY  PATIESF   + G        ARHSLSP +    R    L W  + + +  LH
Sbjct:   36 EYIQPLQDA-PLSRSISHTPPLPPTDSQDGGRTTF--DPLEDFSHDTSNLDATDGCLAAVCSLLQFQIAEVWTYTGDISAAEGKPLEPMCLHVYARPATIESFK-DVHGALRDDNTSARHSLSPGLVDEARKQERLLWFTSMHPDTPLH 180          
BLAST of mRNA_H-paniculata_contig9000.16857.1 vs. uniprot
Match: A0A836C8Q0_9STRA (Serine/threonine-protein kinase CTR1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8Q0_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 2.420e-11
Identity = 36/82 (43.90%), Postives = 52/82 (63.41%), Query Frame = 0
Query:   67 FSLEACRTAVSDRCLEAACSLLHFEIAEVWTYTGDYSAAEGKAVEPMLLHVYTSPATIESFGGKLKGVWSGGGEGARHSLSP 148
            FS++A   +  DRCL+AAC+ L F++ EVW++ G+     GKA+EP+ L  Y  PATIE++G ++K          RHSLSP
Sbjct:    4 FSMDAMNMSAVDRCLDAACASLGFDLGEVWSFCGEVQ--RGKALEPVCLRAYARPATIETYGSRVKLGLDHESVSQRHSLSP 83          
BLAST of mRNA_H-paniculata_contig9000.16857.1 vs. uniprot
Match: A0A6H5JUQ3_9PHAE (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JUQ3_9PHAE)

HSP 1 Score: 53.9 bits (128), Expect = 6.300e-5
Identity = 41/130 (31.54%), Postives = 58/130 (44.62%), Query Frame = 0
Query:   78 DRCLEAACSLLHFEIAEVWTYTGDYS-------------------AAEGKAVEPMLLHVYTSPATIESFGGKLKGVWSGGGEGAR----HSLSPSV-----RSPCTLSWSRTEYGNRLLHPPPRISYGTV 179
            D CL      L F+IAE+W +  D S                   AA G  V+    HVYT PAT++++ G++ G+W+ G + +R    H LSP +      S C L +  T    R LHP   I+   V
Sbjct:   27 DTCLSVGALSLKFDIAELWRFGPDSSKSGSDKAREVRGGAGSASGAAGGGTVKAHCEHVYTMPATLKTYSGRIMGMWNSGFDDSRAPQHHVLSPQLCEQARASECPLWFKSTPA--RKLHPSLPINTAVV 154          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9000.16857.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JZF2_9PHAE5.600e-2748.32Protein kinase domain-containing protein n=2 Tax=E... [more]
A0A836C8Q0_9STRA2.420e-1143.90Serine/threonine-protein kinase CTR1 n=1 Tax=Tribo... [more]
A0A6H5JUQ3_9PHAE6.300e-531.54Protein kinase domain-containing protein n=2 Tax=E... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig9000contigH-paniculata_contig9000:1996..9087 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig9000.16857.1mRNA_H-paniculata_contig9000.16857.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig9000 1787..9223 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig9000.16857.1 ID=prot_H-paniculata_contig9000.16857.1|Name=mRNA_H-paniculata_contig9000.16857.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=217bp
MSAPLSSLPPPGQERNVSHAGASSEFTQPLSSASPPSRALSHTPPLLPTH
AVENEASALVANPLNEFSLEACRTAVSDRCLEAACSLLHFEIAEVWTYTG
DYSAAEGKAVEPMLLHVYTSPATIESFGGKLKGVWSGGGEGARHSLSPSV
RSPCTLSWSRTEYGNRLLHPPPRISYGTVYYSALCRYGVDFIMAGKNERI
NHFPFFSTASIEILSN*
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