prot_H-paniculata_contig900.16855.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig900.16855.1
Unique Nameprot_H-paniculata_contig900.16855.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length652
Homology
BLAST of mRNA_H-paniculata_contig900.16855.1 vs. uniprot
Match: D8LEZ9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEZ9_ECTSI)

HSP 1 Score: 689 bits (1778), Expect = 7.940e-241
Identity = 478/675 (70.81%), Postives = 517/675 (76.59%), Query Frame = 0
Query:    3 GRGREMTLPAWMTKDGAGGPDPSMAGMPQIP-GGLNGGALPQNHFGNGSSYPVAPAQGQFADPNGQQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEREGRRRRSXXXRGDRHGRRRDSRSPPRGGGHDRXXXXXXXXXXXXXXXXXXXXXYGRGDSYXXXXXXXXXXXXXXXXX-----------RFENPRNESLNDRERIERRRKRRALRPSNFDVKPDDPTAVALLEASAQQMLASRGSGGT-TQPPQIMARLPGASNQQTRHARRLYIGACPKTSEEEMTYFFNDVINRALQVPVEGGAVQSVYVSQEKAFAFLELKTIELATAVLELDGIVYKDTQLKMRRPSDYNPSMVPANVGPIPKLDVSTLGIISNTVPDSDNKVFIGGLPYNLTEDQASFFLALVRELLSAFGPLKSFHLVRDPGSPTSKGYGFCEYVDPAVTAIACEGLHGMTLGDKTLTVRPATDRNSSAQNHHHQQ------------LNAMAMPAAP-VGLTAAPTQQEHMQLAQAMAALDPSAAAAAMXXXXXPAGTLPPPGVPSAAAESAVAANLIRAIPPTRVLVLLNMVTEEELTDPQEYDDIVDDIQQECRTHGTVVSVIVPRPGEADASSAVGKVFVEYDTKESAQRAALSLAGRQFAQRIVKVEYVNEDKFSRREFD 651
            GRGR MTLPAWMTK+G  G  P +A  P +P GGLN         GNG+ YP+APAQGQFADP    Q        XXXXXXXXXXXXXXXXXXXXXXXXXXX                                  XXXXXXXXXXXXXXXXXXXX YGR    XXXXXXXXXXXXXXXXX           RFENPRNE+LNDR+RIERRRKRRALRPSNFDVKPDDPTAVALLEASAQQML SRGSG   +  PQ+MARLPGASNQQTRHARRLYIG CPKT+EEEM+ FFN+VINRAL+ P++GGAV SVYVSQEKAFAFLELKT+ELAT+VLELDGIVYK+TQLKMRRPSDYNP +VPA  GPIPKL++S LGIIS+TVPDSDNKVFIGGLPYNLTEDQ       VRELLSAFGPLKSFHLVRDPGSPTSKGYGFCEY++  VTAIACEGLHGMTLGDKTLTVRPATDR SS                    +  M M     +GLTA PTQQE MQLAQAMAALDP+A+ AAM              VPSAAAESAVAANLIRAIPPTRVLV+LNMVTE EL DPQEY+DIVDDIQQEC +HGTV+S+IVPRPGEADAS AVGKVFVEYDTK+SAQ+AALSLAGRQF   IVKVEY+NE+KF+RREF+
Sbjct:    6 GRGRGMTLPAWMTKEG--GEQPVVAQAPPLPPGGLN---------GNGNGYPMAPAQGQFADPPLLPQQPPQPMYAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYGRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGRFENPRNEALNDRDRIERRRKRRALRPSNFDVKPDDPTAVALLEASAQQMLVSRGSGVMQSAAPQLMARLPGASNQQTRHARRLYIGGCPKTTEEEMSSFFNEVINRALEYPIDGGAVASVYVSQEKAFAFLELKTMELATSVLELDGIVYKETQLKMRRPSDYNPQLVPAASGPIPKLNLSVLGIISSTVPDSDNKVFIGGLPYNLTEDQ-------VRELLSAFGPLKSFHLVRDPGSPTSKGYGFCEYLNAGVTAIACEGLHGMTLGDKTLTVRPATDRGSSGXXXXXXXXXXXXXXXXXXXMPGMQMGGGQQMGLTAPPTQQEQMQLAQAMAALDPNASQAAMASLAQGGAG----AVPSAAAESAVAANLIRAIPPTRVLVMLNMVTEAELRDPQEYEDIVDDIQQECSSHGTVLSIIVPRPGEADASRAVGKVFVEYDTKDSAQKAALSLAGRQFGANIVKVEYLNEEKFARREFE 636          
BLAST of mRNA_H-paniculata_contig900.16855.1 vs. uniprot
Match: A0A835ZGN1_9STRA (Splicing factor U2AF subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGN1_9STRA)

HSP 1 Score: 360 bits (924), Expect = 1.340e-115
Identity = 216/446 (48.43%), Postives = 285/446 (63.90%), Query Frame = 0
Query:  209 RPSNFDVKP---DDPTAVALL-EASAQQMLASRGSGGTTQPPQIMARLPGASNQQTRHARRLYIGACPKTSEEEMTYFFNDVINRALQVPVEGGAVQSVYVSQEKAFAFLELKTIELATAVLELDGIVYKDTQLKMRRPSDYNPSMVPAN-VGPIPKLDVSTLGIISNTVPDSDNKVFIGGLPYNLTEDQASFFLALVRELLSAFGPLKSFHLVRDPGSPTSKGYGFCEYVDPAVTAIACEGLHGMTLGDKTLTVRPATDRNSSAQNHHHQQLNAMAMPAAPVGLTAAPTQQEHMQLAQAMAALDPSAAAAAMXXXXXPAGTLPPPGVPSAAAESAVAANLIRAIPPTRVLVLLNMVTEEELTDPQEYDDIVDDIQQECRTHGTVVSVIVPRPGEADASSAVGKVFVEYDTKESAQRAALSLAGRQFAQRIVKVEYVNEDKFSRRE 649
            R SNFDV P   D+ TA  +  +A  QQ L +  +      P      P  + QQTRHARRLY+G  P+  E+E+  FFN+V+ RAL    E   V SVY++Q++ FAF+EL+++ L TA ++LDG++Y D  LK+RRPSDYNPS VP+     +  L++S LGI+SNTVPDS NKVFIGGLPY+LTE+Q       V+ELLSAFG LK+ HLV+D G+  SKGY FCEY DPAVT+IACEGL+GM LGDKTLTVR         + H      A+++ A              + LAQAMAALDP+A                      A  ESA AA ++R + PTRVLVL+NMV EE+L D QEY DI++D++ EC+ +G + +VI+PRPGE    + VGKVF+EY   + AQ AA++LAGRQFA +IVK +Y +E +F+ R+
Sbjct:    3 RGSNFDVLPEGMDEATANQIAAQAFLQQTLPAAAAAAAVPLPMGGGAAP--TMQQTRHARRLYVGNIPRVPEQEVQRFFNEVLTRALGGRQESDPVVSVYLNQDRGFAFVELRSVALTTAAIQLDGLMYGDISLKIRRPSDYNPSAVPSEFTNEVVHLNLSALGIVSNTVPDSPNKVFIGGLPYHLTEEQ-------VKELLSAFGALKALHLVKDAGATNSKGYAFCEYQDPAVTSIACEGLNGMALGDKTLTVR-------KVRGH------ALSVAA--------------LMLAQAMAALDPTAH--------------------KAVTESAEAATVVRTMAPTRVLVLMNMVGEEDLKDDQEYTDILEDVRDECKQYGELKTVIIPRPGE----TGVGKVFLEYAEVQQAQAAAMALAGRQFASKIVKAQYHDESRFAARD 388          
BLAST of mRNA_H-paniculata_contig900.16855.1 vs. uniprot
Match: A0A8K1C271_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C271_PYTOL)

HSP 1 Score: 339 bits (869), Expect = 3.930e-105
Identity = 209/447 (46.76%), Postives = 282/447 (63.09%), Query Frame = 0
Query:  211 SNFDVKP-----DDPTAVALLEASAQQMLASRGSGGTTQ--PPQIMARLPGASNQQTRHARRLYIGACPKTSEEEMTYFFNDVINRALQVPVEGGAVQSVYVSQEKAFAFLELKTIELATAVLELDGIVYKDTQLKMRRPSDYNPSMVPANVGPIPKLDVSTLGIISNTVPDSDNKVFIGGLPYNLTEDQASFFLALVRELLSAFGPLKSFHLVRDPGSPTSKGYGFCEYVDPAVTAIACEGLHGMTLGDKTLTVRPATDRNSSAQNHHHQQLNAMAMPAAPVGLTAAPTQQEHMQLAQAMAALDPSAAAAAMXXXXXPAGTLPPPGVPSAAAESAVAANLIRAIPPTRVLVLLNMVTEEELTDPQEYDDIVDDIQQECRTHGTVVSVIVPRPGEADASSAVGKVFVEYDTKESAQRAALSLAGRQFAQRIVKVEYVNEDKFSRREF 650
            SNFDV+P     ++  A A      Q M A  G+ G     PP        AS+QQTRHARR+Y+G   + +E+E+T FFNDVI+RAL    EGGAV SVY+++E+ FAF+ELKTIEL TA + LDG+ ++   LK+RRP+DYNPS VP ++GPIP+L+++ LGI+S TV DS +K+F+GG+PY+L +DQ       V+ELL AFGPLKSFHLV++  +  SKGYGFCEY+DP VT  AC GL+ M LGDKTLTVR A  +            NA A+       +AA +    + +      LDP+ AA  +         L   G+PSA   +           P+RV+VLLNMVT +EL D +EY+DI+DDI+ EC   G V+S+++PRP +    +AVGKVFVE+    SAQ A+  L GR FA R V VE+++E K++RR+F
Sbjct:  159 SNFDVRPPGVTEENAAAYAAQAILQQNMAALSGAVGPASFGPPPANGTY-SASHQQTRHARRIYVGGIGEVAEQEITEFFNDVIDRALGERQEGGAVVSVYINRERHFAFVELKTIELTTACMNLDGVSFRGQPLKIRRPNDYNPSNVPKDLGPIPQLNLAALGIVSTTVQDSPHKIFVGGIPYHLNDDQ-------VKELLQAFGPLKSFHLVKELNTNMSKGYGFCEYLDPNVTDAACIGLNDMKLGDKTLTVRRAMSQE-----------NAKAV------ASAAGSVNSGLSMG-----LDPTTAA--LQTISMAGFGL---GIPSAPLGN-----------PSRVIVLLNMVTADELEDDEEYNDILDDIKTECERFGPVLSLVIPRPRDG-YHTAVGKVFVEFADIASAQGASQELHGRGFANRTVSVEFMDEQKYARRDF 558          
BLAST of mRNA_H-paniculata_contig900.16855.1 vs. uniprot
Match: A0A5D6XX73_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XX73_9STRA)

HSP 1 Score: 339 bits (870), Expect = 1.380e-104
Identity = 218/479 (45.51%), Postives = 284/479 (59.29%), Query Frame = 0
Query:  199 IERRRKRRALRPSNFDVKP----DDPTAVALLEASAQQMLASRGSGGTT---QPPQIMARLP--------------------GASNQQTRHARRLYIGACPKTSEEEMTYFFNDVINRALQVPVEGGAVQSVYVSQEKAFAFLELKTIELATAVLELDGIVYKDTQLKMRRPSDYNPSMVPANVGPIPKLDVSTLGIISNTVPDSDNKVFIGGLPYNLTEDQASFFLALVRELLSAFGPLKSFHLVRDPGSPTSKGYGFCEYVDPAVTAIACEGLHGMTLGDKTLTVRPATDRNSSAQNHHHQQLNAMAMPAAPVGLTAAPTQQEHMQLAQAMAALDPSAAAAAMXXXXXPAGTLPPPGVPSAAAESAVAANLIRAIPPTRVLVLLNMVTEEELTDPQEYDDIVDDIQQECRTHGTVVSVIVPRPGEADASSAVGKVFVEYDTKESAQRAALSLAGRQFAQRIVKVEYVNEDKFSRREF 650
            I RRRK+     S FDV+P    ++  A    +A  QQ +A+   G       PP  +A  P                    G ++QQTRHARRLY+G   +  E+E+T FFNDVI+RAL   +EGGAV SVY+++E+ FAF+EL++IEL TA + LDG+ ++   LK+RRP+DYNP+ VP  +GPIP+L+++ LGI+S TV D   K+FIGGLPY+L E+Q       ++ELL AFGPL+SFHLV++  S  SKGYGFCEY+DP  T  AC GL+ M LGDKTLTVR A     +++              A  G  ++      M+LA   AAL     A +M     P+G   P G PS                  RV+VLLNMVT EEL D  EY DIVDDI+ EC   G V+S+++PRP +    SAVGKVFVEYD   SAQ AA  L GR F+ RIV VEY++E K++RREF
Sbjct:  190 IVRRRKK-----SYFDVRPPGVTEENAAAYAAQAILQQNMATHAGGAGAVAFNPPAAVAVAPSAPAHSHSALVPGLLPPQSFGGNSQQTRHARRLYVGGLGEVGEQEITEFFNDVIDRALGERMEGGAVVSVYINRERHFAFVELRSIELTTACMNLDGVAFRGQPLKVRRPNDYNPATVPTELGPIPQLNLAALGIVSTTVCDGPGKIFIGGLPYHLNEEQ-------IKELLQAFGPLRSFHLVKELSSNMSKGYGFCEYLDPNSTDAACLGLNEMKLGDKTLTVRRAMTPEYTSK--------------AAGGGGSSSHPNPGMELAS-QAALQ----ALSMAGLGAPSG---PSGAPS------------------RVVVLLNMVTPEELDDEDEYADIVDDIKSECERFGRVISIVLPRPRDG-FYSAVGKVFVEYDAVPSAQAAAAELHGRGFSNRIVAVEYMDEHKYARREF 615          
BLAST of mRNA_H-paniculata_contig900.16855.1 vs. uniprot
Match: A0A0P1B7G2_PLAHL (Splicing factor U2AF subunit n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B7G2_PLAHL)

HSP 1 Score: 335 bits (860), Expect = 1.130e-103
Identity = 221/480 (46.04%), Postives = 281/480 (58.54%), Query Frame = 0
Query:  198 RIERRRKRRALRPSNFDVKP-----DDPTAVALLEASAQQMLASRGSGGTTQ--PPQ-IMAR--------------------LPGASNQQTRHARRLYIGACPKTSEEEMTYFFNDVINRALQVPVEGGAVQSVYVSQEKAFAFLELKTIELATAVLELDGIVYKDTQLKMRRPSDYNPSMVPANVGPIPKLDVSTLGIISNTVPDSDNKVFIGGLPYNLTEDQASFFLALVRELLSAFGPLKSFHLVRDPGSPTSKGYGFCEYVDPAVTAIACEGLHGMTLGDKTLTVRPATDRNSSAQNHHHQQLNAMAMPAAPVGLTAAPTQQEHMQLAQAMAALDPSAAAAAMXXXXXPAGTLPPPGVPSAAAESAVAANLIRAIPPTRVLVLLNMVTEEELTDPQEYDDIVDDIQQECRTHGTVVSVIVPRPGEADASSAVGKVFVEYDTKESAQRAALSLAGRQFAQRIVKVEYVNEDKFSRRE 649
            R+ RRRK+     SNFDV+P     ++  A A      Q M A  GS G     PPQ +M                      LPG S QQTRHARRLY+G   + SE E+T FFNDVI+RAL    EGG+V SVY+++E+ FAF+EL+TIEL TA + LDG+ Y    LK+RRP+DYNP  VP ++GPIP+L+++ LGI+S TV D   K+F+GGLPY+L E+Q       V+ELL AFGPL+SFHLV++  S  SKGYGFCEY+D  VT  AC GL+ M LGDKTLTVR A  +            NA A+       +AA T    ++L      LDPS AA                      A S      +   PPTRV+VL NMVT EEL D +EY DIVDDI+ EC   G V S+++PRP +    SAVGKV+VE+   +SAQ AA  L GR F+ R V VE+++E K++RRE
Sbjct:  144 RVVRRRKK-----SNFDVRPPGVTEENAAAYAAQAILQQNMAALSGSVGPASFGPPQNVMTSTGNSSAQSSYAHASVATAYGLPGMS-QQTRHARRLYVGGIGEISEAEITVFFNDVIDRALGEKQEGGSVVSVYINRERHFAFVELRTIELTTACMNLDGVSYNGQPLKIRRPNDYNPGTVPTDLGPIPQLNLAALGIVSTTVSDGPGKIFVGGLPYHLNEEQ-------VKELLQAFGPLRSFHLVKELSSNLSKGYGFCEYMDVNVTDAACLGLNDMRLGDKTLTVRRAMSQE-----------NAKAV------ASAAGTVNTGLELG-----LDPSQAAMQ--------------------AMSLAGITSVPLGPPTRVIVLHNMVTPEELEDEEEYADIVDDIKGECERFGAVPSLLLPRPRDG-VLSAVGKVYVEFSDVQSAQNAAAELHGRGFSNRTVAVEFMDEGKYARRE 567          
BLAST of mRNA_H-paniculata_contig900.16855.1 vs. uniprot
Match: A0A484DRL9_BRELC (Splicing factor U2AF subunit n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DRL9_BRELC)

HSP 1 Score: 331 bits (849), Expect = 3.150e-102
Identity = 220/476 (46.22%), Postives = 281/476 (59.03%), Query Frame = 0
Query:  198 RIERRRKRRALRPSNFDVKP----DDPTAVALLEASAQQ-MLASRGSGGTTQ--PPQIM----ARLPGASN-------------QQTRHARRLYIGACPKTSEEEMTYFFNDVINRALQVPVEGGAVQSVYVSQEKAFAFLELKTIELATAVLELDGIVYKDTQLKMRRPSDYNPSMVPANVGPIPKLDVSTLGIISNTVPDSDNKVFIGGLPYNLTEDQASFFLALVRELLSAFGPLKSFHLVRDPGSPTSKGYGFCEYVDPAVTAIACEGLHGMTLGDKTLTVRPATDRNSSAQNHHHQQLNAMAMPAAPVGLTAAPTQQEHMQLAQAMAALDPSAAAAAMXXXXXPAGTLPPPGVPSAAAESAVAANLIRAIPPTRVLVLLNMVTEEELTDPQEYDDIVDDIQQECRTHGTVVSVIVPRPGEADASSAVGKVFVEYDTKESAQRAALSLAGRQFAQRIVKVEYVNEDKFSRRE 649
            RI RRRK+     SNFDV+P    D+  A    +A  QQ M A  G+ G     PPQI     +  PG S+             QQTRHARRLY+G   + +E E+T FFNDVI+RAL+    GG+V SVY+++E+ FAF+EL+TIEL TA + LDG+ Y    LK+RRP+DYNP  VP  +GPIP+L+++ LGI+S TV D   K+F+GGLPY+L E+Q       V+ELL AFGPL+SFHLV++  S  SKGYGFCEY+D +VT  AC GL+ M LGDKTLTVR A  +            NA A+        AA      +++      LDPS AA          G   P GVP                  TRV+VLLNMVT +EL D  EY DIVDDI+ EC   G VVS+++PRP +    SAVGKVF+E+    SAQ AA  L GR F+ RIV VE++ E+ ++RRE
Sbjct:  132 RIIRRRKK-----SNFDVRPPGVTDENAAAYAAQAILQQNMAALSGAVGPASFGPPQISPSSTSTTPGYSHASXXXXXXFAGMSQQTRHARRLYVGGIGEIAEPEITAFFNDVIDRALEEKQPGGSVVSVYINRERHFAFVELRTIELTTACMNLDGVSYHGQPLKIRRPNDYNPVTVPTELGPIPQLNLAALGIVSTTVSDGPGKIFVGGLPYHLNEEQ-------VKELLQAFGPLRSFHLVKELSSNLSKGYGFCEYLDVSVTDAACMGLNDMRLGDKTLTVRRAMSQE-----------NAKAV------ANAAGNVNTGLEMG-----LDPSQAAMQAMTLAGITGV--PLGVP------------------TRVIVLLNMVTRDELEDDDEYADIVDDIKGECERFGRVVSLLLPRPRDG-ILSAVGKVFIEFQDVASAQGAATELHGRGFSNRIVSVEFMPEELYARRE 552          
BLAST of mRNA_H-paniculata_contig900.16855.1 vs. uniprot
Match: A0A225WYT2_9STRA (Splicing factor U2AF subunit n=2 Tax=Phytophthora TaxID=4783 RepID=A0A225WYT2_9STRA)

HSP 1 Score: 331 bits (848), Expect = 4.550e-102
Identity = 216/478 (45.19%), Postives = 280/478 (58.58%), Query Frame = 0
Query:  199 IERRRKRRALRPSNFDVKP-----DDPTAVALLEASAQQMLASRGSGG--------TTQPPQIMARLP--------------GASNQQTRHARRLYIGACPKTSEEEMTYFFNDVINRALQVPVEGGAVQSVYVSQEKAFAFLELKTIELATAVLELDGIVYKDTQLKMRRPSDYNPSMVPANVGPIPKLDVSTLGIISNTVPDSDNKVFIGGLPYNLTEDQASFFLALVRELLSAFGPLKSFHLVRDPGSPTSKGYGFCEYVDPAVTAIACEGLHGMTLGDKTLTVRPATDRNSSAQNHHHQQLNAMAMPAAPVGLTAAPTQQEHMQLAQAMAALDPSAAAAAMXXXXXPAGTLPPPGVPSAAAESAVAANLIRAIPPTRVLVLLNMVTEEELTDPQEYDDIVDDIQQECRTHGTVVSVIVPRPGEADASSAVGKVFVEYDTKESAQRAALSLAGRQFAQRIVKVEYVNEDKFSRRE 649
            + RRRK+     SNFDV+P     ++  A A      Q M A  GS G        T+ P    A  P                 +QQTRHARRLY+G   + +E+E+T FFNDVI+RAL    EGG+V SVY+++E+ FAF+EL+TIEL TA + LDG+ Y    LK+RRP+DYNP  VP ++GPIP+L+++ LGI+S TV D   K+FIGGLPY+L E+Q       V+ELL AFGPL+SFHLV++  S  SKGYGFCEY+D  VT  AC GL+ M LGDKTLTVR A  +            NA A+       +AA T    +++      LDPS AA                G+PS    +           P+RV+VLLNMVT EEL D +EY DI+DDI+ EC   G V S+++PRP +    SAVGKVFVE+   +SAQ AA  L GR F+ R V VEY++E K++RRE
Sbjct:  131 VVRRRKK-----SNFDVRPPGVTEENAAAYAAQAILQQNMAALSGSVGPASFGAPPTSTPTGNTASTPVYNHSHQASAGFAFAGQSQQTRHARRLYVGGIGEIAEQEITLFFNDVIDRALGEKQEGGSVVSVYINRERHFAFVELRTIELTTACMNLDGVSYNGQPLKIRRPNDYNPGTVPKDLGPIPQLNLAALGIVSTTVSDGPGKIFIGGLPYHLNEEQ-------VKELLQAFGPLRSFHLVKELSSNLSKGYGFCEYMDINVTDAACLGLNDMRLGDKTLTVRRAMSQE-----------NAKAV------ASAAGTVNTGLEMG-----LDPSLAAMQAMSMA---------GIPSVPLGT-----------PSRVIVLLNMVTPEELEDEEEYADILDDIKGECERFGAVSSLLLPRPRDG-VLSAVGKVFVEFGDVQSAQGAATELHGRGFSNRTVAVEYMDEGKYARRE 553          
BLAST of mRNA_H-paniculata_contig900.16855.1 vs. uniprot
Match: D0MXQ4_PHYIT (Splicing factor U2AF subunit n=3 Tax=Phytophthora TaxID=4783 RepID=D0MXQ4_PHYIT)

HSP 1 Score: 331 bits (849), Expect = 4.800e-102
Identity = 220/479 (45.93%), Postives = 282/479 (58.87%), Query Frame = 0
Query:  198 RIERRRKRRALRPSNFDVKPDDPT-----AVALLEASAQQMLASRGSGGTTQ--PPQIMA---RLPGAS-----------------NQQTRHARRLYIGACPKTSEEEMTYFFNDVINRALQVPVEGGAVQSVYVSQEKAFAFLELKTIELATAVLELDGIVYKDTQLKMRRPSDYNPSMVPANVGPIPKLDVSTLGIISNTVPDSDNKVFIGGLPYNLTEDQASFFLALVRELLSAFGPLKSFHLVRDPGSPTSKGYGFCEYVDPAVTAIACEGLHGMTLGDKTLTVRPATDRNSSAQNHHHQQLNAMAMPAAPVGLTAAPTQQEHMQLAQAMAALDPSAAAAAMXXXXXPAGTLPPPGVPSAAAESAVAANLIRAIPPTRVLVLLNMVTEEELTDPQEYDDIVDDIQQECRTHGTVVSVIVPRPGEADASSAVGKVFVEYDTKESAQRAALSLAGRQFAQRIVKVEYVNEDKFSRRE 649
            RI RRRK+     SNFDV+P   T     A A      Q M A  GS G +   PPQ        P AS                 +QQTRHARRLY+G   + SE E+T FFNDVI+RAL    EGG+V SVY+++E+ FAF+EL++IEL TA + LDG+ Y    LK+RRP+DYNP+ VP ++GPIP+L+++ LGI+S TV D   K+FIGGLPY+L E+Q       V+ELL AFGPL+SFHLV++  S  SKGYGFCEY+D  VT  AC GL+ M LGDKTLTVR A  +            NA A+       +AA T    +++      LDPS AA                G+PS    +           P+RV+VLLNMVT EEL D +EY DI+DDI+ EC   G V S+++PRP +    SAVGKVFVE+   +SAQ AA  L GR F+ R V VE+++E K++RRE
Sbjct:  144 RIVRRRKK-----SNFDVRPPGVTEKNAAAYAAQAILQQNMAALSGSVGASSFGPPQTSTPTGNAPPASLHTHSNPNPGYGFSSGLSQQTRHARRLYVGGIGEISEPEITAFFNDVIDRALGEKQEGGSVVSVYINRERHFAFVELRSIELTTACMNLDGVSYNGQPLKIRRPNDYNPATVPKDLGPIPQLNLAALGIVSTTVSDGPGKIFIGGLPYHLNEEQ-------VKELLQAFGPLRSFHLVKELSSNLSKGYGFCEYMDINVTDAACIGLNDMQLGDKTLTVRRAMSQE-----------NAKAV------ASAAGTVNTGLEMG-----LDPSLAAMQAMSMA---------GIPSVPLGT-----------PSRVIVLLNMVTPEELEDEEEYADILDDIKGECERFGAVPSLLLPRPRDG-VLSAVGKVFVEFADVQSAQAAATELHGRGFSNRTVAVEFMDEGKYARRE 567          
BLAST of mRNA_H-paniculata_contig900.16855.1 vs. uniprot
Match: A0A3R7NK17_9STRA (Uncharacterized protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7NK17_9STRA)

HSP 1 Score: 333 bits (854), Expect = 1.750e-101
Identity = 212/467 (45.40%), Postives = 275/467 (58.89%), Query Frame = 0
Query:  211 SNFDVKP----DDPTAVALLEASAQQMLASRG------SGGTTQPPQIMARLPGASN------------------QQTRHARRLYIGACPKTSEEEMTYFFNDVINRALQVPVEGGAVQSVYVSQEKAFAFLELKTIELATAVLELDGIVYKDTQLKMRRPSDYNPSMVPANVGPIPKLDVSTLGIISNTVPDSDNKVFIGGLPYNLTEDQASFFLALVRELLSAFGPLKSFHLVRDPGSPTSKGYGFCEYVDPAVTAIACEGLHGMTLGDKTLTVRPATDRNSSAQNHHHQQLNAMAMPAAPVGLTAAPTQQEHMQLAQAMAALDPSAAAAAMXXXXXPAGTLPPPGVPSAAAESAVAANLIRAIPPTRVLVLLNMVTEEELTDPQEYDDIVDDIQQECRTHGTVVSVIVPRPGEADASSAVGKVFVEYDTKESAQRAALSLAGRQFAQRIVKVEYVNEDKFSRRE 649
            SNFDV+P    ++  A    +A  QQ +A+        S G  QP       P   N                  QQTRHARRLY+G   + +E E+T FFNDVI+RAL    EGG+V SVY+++E+ FAF+EL+TIEL TA + LDG+ Y    LK+RRP+DYNP+ VP ++GPIP+L+++ LGI+S TV D   K+FIGGLPYNL E+Q       V+ELL AFGPL+SFHLV++  S  SKGYGFCEY D  VT  AC GL+ M LGDKTLTVR A  +            NA A+       +AA T    +++      LDPS AA                G+PS           +   PP+RV+VLLNMVT EEL D +EY DI+DDI+ EC   GTV S+++PRP +    SAVGKVF+E+   +SAQ AA  L GR F+ R V VE+++E K++RRE
Sbjct:  263 SNFDVRPPGVTEENAAAYAAQAILQQNMAALSGAVGPASFGPPQPTGNAQSFPPMHNHXXXXXXXXXXXXFSGQSQQTRHARRLYVGGIGEIAEPEITAFFNDVIDRALGEKQEGGSVVSVYINRERHFAFVELRTIELTTACMNLDGVAYNGQPLKIRRPNDYNPATVPKDLGPIPQLNLAALGIVSTTVSDGPGKIFIGGLPYNLNEEQ-------VKELLQAFGPLRSFHLVKELSSNLSKGYGFCEYTDINVTDAACLGLNDMRLGDKTLTVRRAMSQE-----------NAKAV------ASAAGTVNTGLEMG-----LDPSRAAMQAMSLA---------GIPS-----------VPLGPPSRVIVLLNMVTPEELDDEEEYADILDDIKGECERFGTVASLLLPRPRDG-VPSAVGKVFIEFGDVQSAQSAATELHGRGFSNRTVAVEFMDEGKYARRE 679          
BLAST of mRNA_H-paniculata_contig900.16855.1 vs. uniprot
Match: A0A6A3P0N3_9STRA (Splicing factor U2AF subunit n=8 Tax=Phytophthora TaxID=4783 RepID=A0A6A3P0N3_9STRA)

HSP 1 Score: 330 bits (846), Expect = 2.260e-101
Identity = 216/485 (44.54%), Postives = 287/485 (59.18%), Query Frame = 0
Query:  198 RIERRRKRRALRPSNFDVKP----DDPTAVALLEASAQQMLASR------GSGGTTQPPQI----MARLPGAS-------------------NQQTRHARRLYIGACPKTSEEEMTYFFNDVINRALQVPVEGGAVQSVYVSQEKAFAFLELKTIELATAVLELDGIVYKDTQLKMRRPSDYNPSMVPANVGPIPKLDVSTLGIISNTVPDSDNKVFIGGLPYNLTEDQASFFLALVRELLSAFGPLKSFHLVRDPGSPTSKGYGFCEYVDPAVTAIACEGLHGMTLGDKTLTVRPATDRNSSAQNHHHQQLNAMAMPAAPVGLTAAPTQQEHMQLAQAMAALDPSAAAAAMXXXXXPAGTLPPPGVPSAAAESAVAANLIRAIPPTRVLVLLNMVTEEELTDPQEYDDIVDDIQQECRTHGTVVSVIVPRPGEADASSAVGKVFVEYDTKESAQRAALSLAGRQFAQRIVKVEYVNEDKFSRRE 649
            R+ RRRK+     SNFDV+P    ++  A    +A  QQ +A+       GS GT Q   +    +  +P +S                   +QQTRHARRLY+G   + SE E+T FFNDVI+RAL    +GG+V SVY+++E+ FAF+EL+TIEL TA + LDG+ Y    LK+RRP+DYNP+ VP ++GPIP+L+++ LGI+S TV D   K+FIGGLPY+L E+Q       V+ELL AFGPL+SFHLV++  S  SKGYGFCEY+D  VT  AC GL+ M LGDKTLTVR A  +            NA A+       +AA T    +++      LDPS AA                G+PS    +           P+RV+VLLNMVT EEL D +EY DI+DDI+ EC   G V S+++PRP +    SAVGKVFVE+   +SAQ AA  L GR F+ R V VE+++E K++RRE
Sbjct:  157 RVVRRRKK-----SNFDVRPPGVTEENAAAYAAQAILQQNMAALSGSVGPGSFGTPQASSVPSTGLCNIPSSSAQSTYNSHQDNAAYGFTGHSQQTRHARRLYVGGIGEISEPEITAFFNDVIDRALGEKQDGGSVVSVYINRERHFAFVELRTIELTTACMNLDGVSYNGQPLKIRRPNDYNPATVPKDLGPIPQLNLAALGIVSTTVSDGPGKIFIGGLPYHLNEEQ-------VKELLQAFGPLRSFHLVKELSSNLSKGYGFCEYMDINVTDAACLGLNDMRLGDKTLTVRRAMSQE-----------NAKAV------ASAAGTVNTGLEMG-----LDPSRAALQAMSLA---------GIPSLPLGA-----------PSRVIVLLNMVTPEELEDEEEYADILDDIKGECERFGAVPSLLLPRPRDG-IPSAVGKVFVEFGDVQSAQNAATELHGRGFSNRTVIVEFMDEGKYARRE 586          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig900.16855.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LEZ9_ECTSI7.940e-24170.81Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZGN1_9STRA1.340e-11548.43Splicing factor U2AF subunit n=1 Tax=Tribonema min... [more]
A0A8K1C271_PYTOL3.930e-10546.76Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A5D6XX73_9STRA1.380e-10445.51Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A0P1B7G2_PLAHL1.130e-10346.04Splicing factor U2AF subunit n=1 Tax=Plasmopara ha... [more]
A0A484DRL9_BRELC3.150e-10246.22Splicing factor U2AF subunit n=1 Tax=Bremia lactuc... [more]
A0A225WYT2_9STRA4.550e-10245.19Splicing factor U2AF subunit n=2 Tax=Phytophthora ... [more]
D0MXQ4_PHYIT4.800e-10245.93Splicing factor U2AF subunit n=3 Tax=Phytophthora ... [more]
A0A3R7NK17_9STRA1.750e-10145.40Uncharacterized protein n=4 Tax=Phytophthora kerno... [more]
A0A6A3P0N3_9STRA2.260e-10144.54Splicing factor U2AF subunit n=8 Tax=Phytophthora ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 265..341
e-value: 1.1
score: 6.1
coord: 553..638
e-value: 0.11
score: 15.1
coord: 379..459
e-value: 4.9E-14
score: 62.6
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 380..456
e-value: 7.6E-11
score: 41.7
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 552..642
score: 10.173
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 264..345
score: 10.36
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 378..463
score: 13.55
IPR006529U2 snRNP auxilliary factor, large subunit, splicing factorTIGRFAMTIGR01642TIGR01642coord: 196..650
e-value: 2.5E-95
score: 317.8
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 259..360
e-value: 1.3E-15
score: 59.4
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 369..477
e-value: 4.4E-20
score: 74.0
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 549..651
e-value: 6.5E-32
score: 111.6
NoneNo IPR availablePANTHERPTHR23139RNA-BINDING PROTEINcoord: 104..650
NoneNo IPR availablePANTHERPTHR23139:SF9SPLICING FACTOR U2AF 65 KDA SUBUNITcoord: 104..650
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 374..644
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 264..347

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig900contigH-paniculata_contig900:398..14542 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig900.16855.1mRNA_H-paniculata_contig900.16855.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig900 295..14801 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig900.16855.1 ID=prot_H-paniculata_contig900.16855.1|Name=mRNA_H-paniculata_contig900.16855.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=652bp
MAGRGREMTLPAWMTKDGAGGPDPSMAGMPQIPGGLNGGALPQNHFGNGS
SYPVAPAQGQFADPNGQQQQQVQVQQTPHQVYAPPPPLPQQHVPPPASAP
APLPEREGRRRRSPSPRGDRHGRRRDSRSPPRGGGHDRRGGGGYGGGGGG
YGGGGGGGGYGRGDSYGGGRRGGGGTGGGGGGGRFENPRNESLNDRERIE
RRRKRRALRPSNFDVKPDDPTAVALLEASAQQMLASRGSGGTTQPPQIMA
RLPGASNQQTRHARRLYIGACPKTSEEEMTYFFNDVINRALQVPVEGGAV
QSVYVSQEKAFAFLELKTIELATAVLELDGIVYKDTQLKMRRPSDYNPSM
VPANVGPIPKLDVSTLGIISNTVPDSDNKVFIGGLPYNLTEDQASFFLAL
VRELLSAFGPLKSFHLVRDPGSPTSKGYGFCEYVDPAVTAIACEGLHGMT
LGDKTLTVRPATDRNSSAQNHHHQQLNAMAMPAAPVGLTAAPTQQEHMQL
AQAMAALDPSAAAAAMAAAMAPAGTLPPPGVPSAAAESAVAANLIRAIPP
TRVLVLLNMVTEEELTDPQEYDDIVDDIQQECRTHGTVVSVIVPRPGEAD
ASSAVGKVFVEYDTKESAQRAALSLAGRQFAQRIVKVEYVNEDKFSRREF
D*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000504RRM_dom
IPR006529U2AF_lg
IPR012677Nucleotide-bd_a/b_plait_sf
IPR035979RBD_domain_sf