mRNA_H-paniculata_contig900.16855.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig900.16855.1 vs. uniprot
Match: D8LEZ9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEZ9_ECTSI) HSP 1 Score: 692 bits (1785), Expect = 4.990e-240 Identity = 479/679 (70.54%), Postives = 519/679 (76.44%), Query Frame = 2
Query: 254 ANMAGRGREMTLPAWMTKDGAGGPDPSMAGMPQIP-GGLNGGALPQNHFGNGSSYPVAPAQGQFADPNGQQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEREGRRRRSXXXRGDRHGRRRDSRSPPRGGGHDRXXXXXXXXXXXXXXXXXXXXXYGRGDSYXXXXXXXXXXXXXXXXX-----------RFENPRNESLNDRERIERRRKRRALRPSNFDVKPDDPTAVALLEASAQQMLASRGSGGT-TQPPQIMARLPGASNQQTRHARRLYIGACPKTSEEEMTYFFNDVINRALQVPVEGGAVQSVYVSQEKAFAFLELKTIELATAVLELDGIVYKDTQLKMRRPSDYNPSMVPANVGPIPKLDVSTLGIISNTVPDSDNKVFIGGLPYNLTEDQASFFLALVRELLSAFGPLKSFHLVRDPGSPTSKGYGFCEYVDPAVTAIACEGLHGMTLGDKTLTVRPATDRNSSAQNHHHQQ------------LNAMAMPAAP-VGLTAAPTQQEHMQLAQAMAALDPSAAAAAMXXXXXPAGTLPPPGVPSAAAESAVAANLIRAIPPTRVLVLLNMVTEEELTDPQEYDDIVDDIQQECRTHGTVVSVIVPRPGEADASSAVGKVFVEYDTKESAQRAALSLAGRQFAQRIVKVEYVNEDKFSRREFD 2212
A+ GRGR MTLPAWMTK+G G P +A P +P GGLN GNG+ YP+APAQGQFADP Q XXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXX YGR XXXXXXXXXXXXXXXXX RFENPRNE+LNDR+RIERRRKRRALRPSNFDVKPDDPTAVALLEASAQQML SRGSG + PQ+MARLPGASNQQTRHARRLYIG CPKT+EEEM+ FFN+VINRAL+ P++GGAV SVYVSQEKAFAFLELKT+ELAT+VLELDGIVYK+TQLKMRRPSDYNP +VPA GPIPKL++S LGIIS+TVPDSDNKVFIGGLPYNLTEDQ VRELLSAFGPLKSFHLVRDPGSPTSKGYGFCEY++ VTAIACEGLHGMTLGDKTLTVRPATDR SS + M M +GLTA PTQQE MQLAQAMAALDP+A+ AAM VPSAAAESAVAANLIRAIPPTRVLV+LNMVTE EL DPQEY+DIVDDIQQEC +HGTV+S+IVPRPGEADAS AVGKVFVEYDTK+SAQ+AALSLAGRQF IVKVEY+NE+KF+RREF+
Sbjct: 2 AHGGGRGRGMTLPAWMTKEG--GEQPVVAQAPPLPPGGLN---------GNGNGYPMAPAQGQFADPPLLPQQPPQPMYAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYGRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGRFENPRNEALNDRDRIERRRKRRALRPSNFDVKPDDPTAVALLEASAQQMLVSRGSGVMQSAAPQLMARLPGASNQQTRHARRLYIGGCPKTTEEEMSSFFNEVINRALEYPIDGGAVASVYVSQEKAFAFLELKTMELATSVLELDGIVYKETQLKMRRPSDYNPQLVPAASGPIPKLNLSVLGIISSTVPDSDNKVFIGGLPYNLTEDQ-------VRELLSAFGPLKSFHLVRDPGSPTSKGYGFCEYLNAGVTAIACEGLHGMTLGDKTLTVRPATDRGSSGXXXXXXXXXXXXXXXXXXXMPGMQMGGGQQMGLTAPPTQQEQMQLAQAMAALDPNASQAAMASLAQGGAG----AVPSAAAESAVAANLIRAIPPTRVLVMLNMVTEAELRDPQEYEDIVDDIQQECSSHGTVLSIIVPRPGEADASRAVGKVFVEYDTKDSAQKAALSLAGRQFGANIVKVEYLNEEKFARREFE 636
BLAST of mRNA_H-paniculata_contig900.16855.1 vs. uniprot
Match: A0A835ZGN1_9STRA (Splicing factor U2AF subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGN1_9STRA) HSP 1 Score: 362 bits (929), Expect = 6.480e-115 Identity = 216/446 (48.43%), Postives = 285/446 (63.90%), Query Frame = 2
Query: 884 RPSNFDVKP---DDPTAVALL-EASAQQMLASRGSGGTTQPPQIMARLPGASNQQTRHARRLYIGACPKTSEEEMTYFFNDVINRALQVPVEGGAVQSVYVSQEKAFAFLELKTIELATAVLELDGIVYKDTQLKMRRPSDYNPSMVPAN-VGPIPKLDVSTLGIISNTVPDSDNKVFIGGLPYNLTEDQASFFLALVRELLSAFGPLKSFHLVRDPGSPTSKGYGFCEYVDPAVTAIACEGLHGMTLGDKTLTVRPATDRNSSAQNHHHQQLNAMAMPAAPVGLTAAPTQQEHMQLAQAMAALDPSAAAAAMXXXXXPAGTLPPPGVPSAAAESAVAANLIRAIPPTRVLVLLNMVTEEELTDPQEYDDIVDDIQQECRTHGTVVSVIVPRPGEADASSAVGKVFVEYDTKESAQRAALSLAGRQFAQRIVKVEYVNEDKFSRRE 2206
R SNFDV P D+ TA + +A QQ L + + P P + QQTRHARRLY+G P+ E+E+ FFN+V+ RAL E V SVY++Q++ FAF+EL+++ L TA ++LDG++Y D LK+RRPSDYNPS VP+ + L++S LGI+SNTVPDS NKVFIGGLPY+LTE+Q V+ELLSAFG LK+ HLV+D G+ SKGY FCEY DPAVT+IACEGL+GM LGDKTLTVR + H A+++ A + LAQAMAALDP+A A ESA AA ++R + PTRVLVL+NMV EE+L D QEY DI++D++ EC+ +G + +VI+PRPGE + VGKVF+EY + AQ AA++LAGRQFA +IVK +Y +E +F+ R+
Sbjct: 3 RGSNFDVLPEGMDEATANQIAAQAFLQQTLPAAAAAAAVPLPMGGGAAP--TMQQTRHARRLYVGNIPRVPEQEVQRFFNEVLTRALGGRQESDPVVSVYLNQDRGFAFVELRSVALTTAAIQLDGLMYGDISLKIRRPSDYNPSAVPSEFTNEVVHLNLSALGIVSNTVPDSPNKVFIGGLPYHLTEEQ-------VKELLSAFGALKALHLVKDAGATNSKGYAFCEYQDPAVTSIACEGLNGMALGDKTLTVR-------KVRGH------ALSVAA--------------LMLAQAMAALDPTAH--------------------KAVTESAEAATVVRTMAPTRVLVLMNMVGEEDLKDDQEYTDILEDVRDECKQYGELKTVIIPRPGE----TGVGKVFLEYAEVQQAQAAAMALAGRQFASKIVKAQYHDESRFAARD 388
BLAST of mRNA_H-paniculata_contig900.16855.1 vs. uniprot
Match: A0A8K1C271_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C271_PYTOL) HSP 1 Score: 341 bits (874), Expect = 1.700e-104 Identity = 209/447 (46.76%), Postives = 282/447 (63.09%), Query Frame = 2
Query: 890 SNFDVKP-----DDPTAVALLEASAQQMLASRGSGGTTQ--PPQIMARLPGASNQQTRHARRLYIGACPKTSEEEMTYFFNDVINRALQVPVEGGAVQSVYVSQEKAFAFLELKTIELATAVLELDGIVYKDTQLKMRRPSDYNPSMVPANVGPIPKLDVSTLGIISNTVPDSDNKVFIGGLPYNLTEDQASFFLALVRELLSAFGPLKSFHLVRDPGSPTSKGYGFCEYVDPAVTAIACEGLHGMTLGDKTLTVRPATDRNSSAQNHHHQQLNAMAMPAAPVGLTAAPTQQEHMQLAQAMAALDPSAAAAAMXXXXXPAGTLPPPGVPSAAAESAVAANLIRAIPPTRVLVLLNMVTEEELTDPQEYDDIVDDIQQECRTHGTVVSVIVPRPGEADASSAVGKVFVEYDTKESAQRAALSLAGRQFAQRIVKVEYVNEDKFSRREF 2209
SNFDV+P ++ A A Q M A G+ G PP AS+QQTRHARR+Y+G + +E+E+T FFNDVI+RAL EGGAV SVY+++E+ FAF+ELKTIEL TA + LDG+ ++ LK+RRP+DYNPS VP ++GPIP+L+++ LGI+S TV DS +K+F+GG+PY+L +DQ V+ELL AFGPLKSFHLV++ + SKGYGFCEY+DP VT AC GL+ M LGDKTLTVR A + NA A+ +AA + + + LDP+ AA + L G+PSA + P+RV+VLLNMVT +EL D +EY+DI+DDI+ EC G V+S+++PRP + +AVGKVFVE+ SAQ A+ L GR FA R V VE+++E K++RR+F
Sbjct: 159 SNFDVRPPGVTEENAAAYAAQAILQQNMAALSGAVGPASFGPPPANGTY-SASHQQTRHARRIYVGGIGEVAEQEITEFFNDVIDRALGERQEGGAVVSVYINRERHFAFVELKTIELTTACMNLDGVSFRGQPLKIRRPNDYNPSNVPKDLGPIPQLNLAALGIVSTTVQDSPHKIFVGGIPYHLNDDQ-------VKELLQAFGPLKSFHLVKELNTNMSKGYGFCEYLDPNVTDAACIGLNDMKLGDKTLTVRRAMSQE-----------NAKAV------ASAAGSVNSGLSMG-----LDPTTAA--LQTISMAGFGL---GIPSAPLGN-----------PSRVIVLLNMVTADELEDDEEYNDILDDIKTECERFGPVLSLVIPRPRDG-YHTAVGKVFVEFADIASAQGASQELHGRGFANRTVSVEFMDEQKYARRDF 558
BLAST of mRNA_H-paniculata_contig900.16855.1 vs. uniprot
Match: A0A5D6XX73_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XX73_9STRA) HSP 1 Score: 341 bits (875), Expect = 5.980e-104 Identity = 218/479 (45.51%), Postives = 284/479 (59.29%), Query Frame = 2
Query: 854 IERRRKRRALRPSNFDVKP----DDPTAVALLEASAQQMLASRGSGGTT---QPPQIMARLP--------------------GASNQQTRHARRLYIGACPKTSEEEMTYFFNDVINRALQVPVEGGAVQSVYVSQEKAFAFLELKTIELATAVLELDGIVYKDTQLKMRRPSDYNPSMVPANVGPIPKLDVSTLGIISNTVPDSDNKVFIGGLPYNLTEDQASFFLALVRELLSAFGPLKSFHLVRDPGSPTSKGYGFCEYVDPAVTAIACEGLHGMTLGDKTLTVRPATDRNSSAQNHHHQQLNAMAMPAAPVGLTAAPTQQEHMQLAQAMAALDPSAAAAAMXXXXXPAGTLPPPGVPSAAAESAVAANLIRAIPPTRVLVLLNMVTEEELTDPQEYDDIVDDIQQECRTHGTVVSVIVPRPGEADASSAVGKVFVEYDTKESAQRAALSLAGRQFAQRIVKVEYVNEDKFSRREF 2209
I RRRK+ S FDV+P ++ A +A QQ +A+ G PP +A P G ++QQTRHARRLY+G + E+E+T FFNDVI+RAL +EGGAV SVY+++E+ FAF+EL++IEL TA + LDG+ ++ LK+RRP+DYNP+ VP +GPIP+L+++ LGI+S TV D K+FIGGLPY+L E+Q ++ELL AFGPL+SFHLV++ S SKGYGFCEY+DP T AC GL+ M LGDKTLTVR A +++ A G ++ M+LA AAL A +M P+G P G PS RV+VLLNMVT EEL D EY DIVDDI+ EC G V+S+++PRP + SAVGKVFVEYD SAQ AA L GR F+ RIV VEY++E K++RREF
Sbjct: 190 IVRRRKK-----SYFDVRPPGVTEENAAAYAAQAILQQNMATHAGGAGAVAFNPPAAVAVAPSAPAHSHSALVPGLLPPQSFGGNSQQTRHARRLYVGGLGEVGEQEITEFFNDVIDRALGERMEGGAVVSVYINRERHFAFVELRSIELTTACMNLDGVAFRGQPLKVRRPNDYNPATVPTELGPIPQLNLAALGIVSTTVCDGPGKIFIGGLPYHLNEEQ-------IKELLQAFGPLRSFHLVKELSSNMSKGYGFCEYLDPNSTDAACLGLNEMKLGDKTLTVRRAMTPEYTSK--------------AAGGGGSSSHPNPGMELAS-QAALQ----ALSMAGLGAPSG---PSGAPS------------------RVVVLLNMVTPEELDDEDEYADIVDDIKSECERFGRVISIVLPRPRDG-FYSAVGKVFVEYDAVPSAQAAAAELHGRGFSNRIVAVEYMDEHKYARREF 615
BLAST of mRNA_H-paniculata_contig900.16855.1 vs. uniprot
Match: A0A0P1B7G2_PLAHL (Splicing factor U2AF subunit n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B7G2_PLAHL) HSP 1 Score: 337 bits (865), Expect = 4.770e-103 Identity = 221/480 (46.04%), Postives = 281/480 (58.54%), Query Frame = 2
Query: 851 RIERRRKRRALRPSNFDVKP-----DDPTAVALLEASAQQMLASRGSGGTTQ--PPQ-IMAR--------------------LPGASNQQTRHARRLYIGACPKTSEEEMTYFFNDVINRALQVPVEGGAVQSVYVSQEKAFAFLELKTIELATAVLELDGIVYKDTQLKMRRPSDYNPSMVPANVGPIPKLDVSTLGIISNTVPDSDNKVFIGGLPYNLTEDQASFFLALVRELLSAFGPLKSFHLVRDPGSPTSKGYGFCEYVDPAVTAIACEGLHGMTLGDKTLTVRPATDRNSSAQNHHHQQLNAMAMPAAPVGLTAAPTQQEHMQLAQAMAALDPSAAAAAMXXXXXPAGTLPPPGVPSAAAESAVAANLIRAIPPTRVLVLLNMVTEEELTDPQEYDDIVDDIQQECRTHGTVVSVIVPRPGEADASSAVGKVFVEYDTKESAQRAALSLAGRQFAQRIVKVEYVNEDKFSRRE 2206
R+ RRRK+ SNFDV+P ++ A A Q M A GS G PPQ +M LPG S QQTRHARRLY+G + SE E+T FFNDVI+RAL EGG+V SVY+++E+ FAF+EL+TIEL TA + LDG+ Y LK+RRP+DYNP VP ++GPIP+L+++ LGI+S TV D K+F+GGLPY+L E+Q V+ELL AFGPL+SFHLV++ S SKGYGFCEY+D VT AC GL+ M LGDKTLTVR A + NA A+ +AA T ++L LDPS AA A S + PPTRV+VL NMVT EEL D +EY DIVDDI+ EC G V S+++PRP + SAVGKV+VE+ +SAQ AA L GR F+ R V VE+++E K++RRE
Sbjct: 144 RVVRRRKK-----SNFDVRPPGVTEENAAAYAAQAILQQNMAALSGSVGPASFGPPQNVMTSTGNSSAQSSYAHASVATAYGLPGMS-QQTRHARRLYVGGIGEISEAEITVFFNDVIDRALGEKQEGGSVVSVYINRERHFAFVELRTIELTTACMNLDGVSYNGQPLKIRRPNDYNPGTVPTDLGPIPQLNLAALGIVSTTVSDGPGKIFVGGLPYHLNEEQ-------VKELLQAFGPLRSFHLVKELSSNLSKGYGFCEYMDVNVTDAACLGLNDMRLGDKTLTVRRAMSQE-----------NAKAV------ASAAGTVNTGLELG-----LDPSQAAMQ--------------------AMSLAGITSVPLGPPTRVIVLHNMVTPEELEDEEEYADIVDDIKGECERFGAVPSLLLPRPRDG-VLSAVGKVYVEFSDVQSAQNAAAELHGRGFSNRTVAVEFMDEGKYARRE 567
BLAST of mRNA_H-paniculata_contig900.16855.1 vs. uniprot
Match: A0A484DRL9_BRELC (Splicing factor U2AF subunit n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DRL9_BRELC) HSP 1 Score: 333 bits (854), Expect = 1.290e-101 Identity = 220/476 (46.22%), Postives = 281/476 (59.03%), Query Frame = 2
Query: 851 RIERRRKRRALRPSNFDVKP----DDPTAVALLEASAQQ-MLASRGSGGTTQ--PPQIM----ARLPGASN-------------QQTRHARRLYIGACPKTSEEEMTYFFNDVINRALQVPVEGGAVQSVYVSQEKAFAFLELKTIELATAVLELDGIVYKDTQLKMRRPSDYNPSMVPANVGPIPKLDVSTLGIISNTVPDSDNKVFIGGLPYNLTEDQASFFLALVRELLSAFGPLKSFHLVRDPGSPTSKGYGFCEYVDPAVTAIACEGLHGMTLGDKTLTVRPATDRNSSAQNHHHQQLNAMAMPAAPVGLTAAPTQQEHMQLAQAMAALDPSAAAAAMXXXXXPAGTLPPPGVPSAAAESAVAANLIRAIPPTRVLVLLNMVTEEELTDPQEYDDIVDDIQQECRTHGTVVSVIVPRPGEADASSAVGKVFVEYDTKESAQRAALSLAGRQFAQRIVKVEYVNEDKFSRRE 2206
RI RRRK+ SNFDV+P D+ A +A QQ M A G+ G PPQI + PG S+ QQTRHARRLY+G + +E E+T FFNDVI+RAL+ GG+V SVY+++E+ FAF+EL+TIEL TA + LDG+ Y LK+RRP+DYNP VP +GPIP+L+++ LGI+S TV D K+F+GGLPY+L E+Q V+ELL AFGPL+SFHLV++ S SKGYGFCEY+D +VT AC GL+ M LGDKTLTVR A + NA A+ AA +++ LDPS AA G P GVP TRV+VLLNMVT +EL D EY DIVDDI+ EC G VVS+++PRP + SAVGKVF+E+ SAQ AA L GR F+ RIV VE++ E+ ++RRE
Sbjct: 132 RIIRRRKK-----SNFDVRPPGVTDENAAAYAAQAILQQNMAALSGAVGPASFGPPQISPSSTSTTPGYSHASXXXXXXFAGMSQQTRHARRLYVGGIGEIAEPEITAFFNDVIDRALEEKQPGGSVVSVYINRERHFAFVELRTIELTTACMNLDGVSYHGQPLKIRRPNDYNPVTVPTELGPIPQLNLAALGIVSTTVSDGPGKIFVGGLPYHLNEEQ-------VKELLQAFGPLRSFHLVKELSSNLSKGYGFCEYLDVSVTDAACMGLNDMRLGDKTLTVRRAMSQE-----------NAKAV------ANAAGNVNTGLEMG-----LDPSQAAMQAMTLAGITGV--PLGVP------------------TRVIVLLNMVTRDELEDDDEYADIVDDIKGECERFGRVVSLLLPRPRDG-ILSAVGKVFIEFQDVASAQGAATELHGRGFSNRIVSVEFMPEELYARRE 552
BLAST of mRNA_H-paniculata_contig900.16855.1 vs. uniprot
Match: A0A225WYT2_9STRA (Splicing factor U2AF subunit n=2 Tax=Phytophthora TaxID=4783 RepID=A0A225WYT2_9STRA) HSP 1 Score: 333 bits (853), Expect = 1.870e-101 Identity = 216/478 (45.19%), Postives = 280/478 (58.58%), Query Frame = 2
Query: 854 IERRRKRRALRPSNFDVKP-----DDPTAVALLEASAQQMLASRGSGG--------TTQPPQIMARLP--------------GASNQQTRHARRLYIGACPKTSEEEMTYFFNDVINRALQVPVEGGAVQSVYVSQEKAFAFLELKTIELATAVLELDGIVYKDTQLKMRRPSDYNPSMVPANVGPIPKLDVSTLGIISNTVPDSDNKVFIGGLPYNLTEDQASFFLALVRELLSAFGPLKSFHLVRDPGSPTSKGYGFCEYVDPAVTAIACEGLHGMTLGDKTLTVRPATDRNSSAQNHHHQQLNAMAMPAAPVGLTAAPTQQEHMQLAQAMAALDPSAAAAAMXXXXXPAGTLPPPGVPSAAAESAVAANLIRAIPPTRVLVLLNMVTEEELTDPQEYDDIVDDIQQECRTHGTVVSVIVPRPGEADASSAVGKVFVEYDTKESAQRAALSLAGRQFAQRIVKVEYVNEDKFSRRE 2206
+ RRRK+ SNFDV+P ++ A A Q M A GS G T+ P A P +QQTRHARRLY+G + +E+E+T FFNDVI+RAL EGG+V SVY+++E+ FAF+EL+TIEL TA + LDG+ Y LK+RRP+DYNP VP ++GPIP+L+++ LGI+S TV D K+FIGGLPY+L E+Q V+ELL AFGPL+SFHLV++ S SKGYGFCEY+D VT AC GL+ M LGDKTLTVR A + NA A+ +AA T +++ LDPS AA G+PS + P+RV+VLLNMVT EEL D +EY DI+DDI+ EC G V S+++PRP + SAVGKVFVE+ +SAQ AA L GR F+ R V VEY++E K++RRE
Sbjct: 131 VVRRRKK-----SNFDVRPPGVTEENAAAYAAQAILQQNMAALSGSVGPASFGAPPTSTPTGNTASTPVYNHSHQASAGFAFAGQSQQTRHARRLYVGGIGEIAEQEITLFFNDVIDRALGEKQEGGSVVSVYINRERHFAFVELRTIELTTACMNLDGVSYNGQPLKIRRPNDYNPGTVPKDLGPIPQLNLAALGIVSTTVSDGPGKIFIGGLPYHLNEEQ-------VKELLQAFGPLRSFHLVKELSSNLSKGYGFCEYMDINVTDAACLGLNDMRLGDKTLTVRRAMSQE-----------NAKAV------ASAAGTVNTGLEMG-----LDPSLAAMQAMSMA---------GIPSVPLGT-----------PSRVIVLLNMVTPEELEDEEEYADILDDIKGECERFGAVSSLLLPRPRDG-VLSAVGKVFVEFGDVQSAQGAATELHGRGFSNRTVAVEYMDEGKYARRE 553
BLAST of mRNA_H-paniculata_contig900.16855.1 vs. uniprot
Match: D0MXQ4_PHYIT (Splicing factor U2AF subunit n=3 Tax=Phytophthora TaxID=4783 RepID=D0MXQ4_PHYIT) HSP 1 Score: 333 bits (854), Expect = 1.980e-101 Identity = 220/479 (45.93%), Postives = 282/479 (58.87%), Query Frame = 2
Query: 851 RIERRRKRRALRPSNFDVKPDDPT-----AVALLEASAQQMLASRGSGGTTQ--PPQIMA---RLPGAS-----------------NQQTRHARRLYIGACPKTSEEEMTYFFNDVINRALQVPVEGGAVQSVYVSQEKAFAFLELKTIELATAVLELDGIVYKDTQLKMRRPSDYNPSMVPANVGPIPKLDVSTLGIISNTVPDSDNKVFIGGLPYNLTEDQASFFLALVRELLSAFGPLKSFHLVRDPGSPTSKGYGFCEYVDPAVTAIACEGLHGMTLGDKTLTVRPATDRNSSAQNHHHQQLNAMAMPAAPVGLTAAPTQQEHMQLAQAMAALDPSAAAAAMXXXXXPAGTLPPPGVPSAAAESAVAANLIRAIPPTRVLVLLNMVTEEELTDPQEYDDIVDDIQQECRTHGTVVSVIVPRPGEADASSAVGKVFVEYDTKESAQRAALSLAGRQFAQRIVKVEYVNEDKFSRRE 2206
RI RRRK+ SNFDV+P T A A Q M A GS G + PPQ P AS +QQTRHARRLY+G + SE E+T FFNDVI+RAL EGG+V SVY+++E+ FAF+EL++IEL TA + LDG+ Y LK+RRP+DYNP+ VP ++GPIP+L+++ LGI+S TV D K+FIGGLPY+L E+Q V+ELL AFGPL+SFHLV++ S SKGYGFCEY+D VT AC GL+ M LGDKTLTVR A + NA A+ +AA T +++ LDPS AA G+PS + P+RV+VLLNMVT EEL D +EY DI+DDI+ EC G V S+++PRP + SAVGKVFVE+ +SAQ AA L GR F+ R V VE+++E K++RRE
Sbjct: 144 RIVRRRKK-----SNFDVRPPGVTEKNAAAYAAQAILQQNMAALSGSVGASSFGPPQTSTPTGNAPPASLHTHSNPNPGYGFSSGLSQQTRHARRLYVGGIGEISEPEITAFFNDVIDRALGEKQEGGSVVSVYINRERHFAFVELRSIELTTACMNLDGVSYNGQPLKIRRPNDYNPATVPKDLGPIPQLNLAALGIVSTTVSDGPGKIFIGGLPYHLNEEQ-------VKELLQAFGPLRSFHLVKELSSNLSKGYGFCEYMDINVTDAACIGLNDMQLGDKTLTVRRAMSQE-----------NAKAV------ASAAGTVNTGLEMG-----LDPSLAAMQAMSMA---------GIPSVPLGT-----------PSRVIVLLNMVTPEELEDEEEYADILDDIKGECERFGAVPSLLLPRPRDG-VLSAVGKVFVEFADVQSAQAAATELHGRGFSNRTVAVEFMDEGKYARRE 567
BLAST of mRNA_H-paniculata_contig900.16855.1 vs. uniprot
Match: A0A3R7NK17_9STRA (Uncharacterized protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7NK17_9STRA) HSP 1 Score: 335 bits (859), Expect = 7.370e-101 Identity = 212/467 (45.40%), Postives = 275/467 (58.89%), Query Frame = 2
Query: 890 SNFDVKP----DDPTAVALLEASAQQMLASRG------SGGTTQPPQIMARLPGASN------------------QQTRHARRLYIGACPKTSEEEMTYFFNDVINRALQVPVEGGAVQSVYVSQEKAFAFLELKTIELATAVLELDGIVYKDTQLKMRRPSDYNPSMVPANVGPIPKLDVSTLGIISNTVPDSDNKVFIGGLPYNLTEDQASFFLALVRELLSAFGPLKSFHLVRDPGSPTSKGYGFCEYVDPAVTAIACEGLHGMTLGDKTLTVRPATDRNSSAQNHHHQQLNAMAMPAAPVGLTAAPTQQEHMQLAQAMAALDPSAAAAAMXXXXXPAGTLPPPGVPSAAAESAVAANLIRAIPPTRVLVLLNMVTEEELTDPQEYDDIVDDIQQECRTHGTVVSVIVPRPGEADASSAVGKVFVEYDTKESAQRAALSLAGRQFAQRIVKVEYVNEDKFSRRE 2206
SNFDV+P ++ A +A QQ +A+ S G QP P N QQTRHARRLY+G + +E E+T FFNDVI+RAL EGG+V SVY+++E+ FAF+EL+TIEL TA + LDG+ Y LK+RRP+DYNP+ VP ++GPIP+L+++ LGI+S TV D K+FIGGLPYNL E+Q V+ELL AFGPL+SFHLV++ S SKGYGFCEY D VT AC GL+ M LGDKTLTVR A + NA A+ +AA T +++ LDPS AA G+PS + PP+RV+VLLNMVT EEL D +EY DI+DDI+ EC GTV S+++PRP + SAVGKVF+E+ +SAQ AA L GR F+ R V VE+++E K++RRE
Sbjct: 263 SNFDVRPPGVTEENAAAYAAQAILQQNMAALSGAVGPASFGPPQPTGNAQSFPPMHNHXXXXXXXXXXXXFSGQSQQTRHARRLYVGGIGEIAEPEITAFFNDVIDRALGEKQEGGSVVSVYINRERHFAFVELRTIELTTACMNLDGVAYNGQPLKIRRPNDYNPATVPKDLGPIPQLNLAALGIVSTTVSDGPGKIFIGGLPYNLNEEQ-------VKELLQAFGPLRSFHLVKELSSNLSKGYGFCEYTDINVTDAACLGLNDMRLGDKTLTVRRAMSQE-----------NAKAV------ASAAGTVNTGLEMG-----LDPSRAAMQAMSLA---------GIPS-----------VPLGPPSRVIVLLNMVTPEELDDEEEYADILDDIKGECERFGTVASLLLPRPRDG-VPSAVGKVFIEFGDVQSAQSAATELHGRGFSNRTVAVEFMDEGKYARRE 679
BLAST of mRNA_H-paniculata_contig900.16855.1 vs. uniprot
Match: A0A6A3P0N3_9STRA (Splicing factor U2AF subunit n=8 Tax=Phytophthora TaxID=4783 RepID=A0A6A3P0N3_9STRA) HSP 1 Score: 332 bits (851), Expect = 9.260e-101 Identity = 216/485 (44.54%), Postives = 287/485 (59.18%), Query Frame = 2
Query: 851 RIERRRKRRALRPSNFDVKP----DDPTAVALLEASAQQMLASR------GSGGTTQPPQI----MARLPGAS-------------------NQQTRHARRLYIGACPKTSEEEMTYFFNDVINRALQVPVEGGAVQSVYVSQEKAFAFLELKTIELATAVLELDGIVYKDTQLKMRRPSDYNPSMVPANVGPIPKLDVSTLGIISNTVPDSDNKVFIGGLPYNLTEDQASFFLALVRELLSAFGPLKSFHLVRDPGSPTSKGYGFCEYVDPAVTAIACEGLHGMTLGDKTLTVRPATDRNSSAQNHHHQQLNAMAMPAAPVGLTAAPTQQEHMQLAQAMAALDPSAAAAAMXXXXXPAGTLPPPGVPSAAAESAVAANLIRAIPPTRVLVLLNMVTEEELTDPQEYDDIVDDIQQECRTHGTVVSVIVPRPGEADASSAVGKVFVEYDTKESAQRAALSLAGRQFAQRIVKVEYVNEDKFSRRE 2206
R+ RRRK+ SNFDV+P ++ A +A QQ +A+ GS GT Q + + +P +S +QQTRHARRLY+G + SE E+T FFNDVI+RAL +GG+V SVY+++E+ FAF+EL+TIEL TA + LDG+ Y LK+RRP+DYNP+ VP ++GPIP+L+++ LGI+S TV D K+FIGGLPY+L E+Q V+ELL AFGPL+SFHLV++ S SKGYGFCEY+D VT AC GL+ M LGDKTLTVR A + NA A+ +AA T +++ LDPS AA G+PS + P+RV+VLLNMVT EEL D +EY DI+DDI+ EC G V S+++PRP + SAVGKVFVE+ +SAQ AA L GR F+ R V VE+++E K++RRE
Sbjct: 157 RVVRRRKK-----SNFDVRPPGVTEENAAAYAAQAILQQNMAALSGSVGPGSFGTPQASSVPSTGLCNIPSSSAQSTYNSHQDNAAYGFTGHSQQTRHARRLYVGGIGEISEPEITAFFNDVIDRALGEKQDGGSVVSVYINRERHFAFVELRTIELTTACMNLDGVSYNGQPLKIRRPNDYNPATVPKDLGPIPQLNLAALGIVSTTVSDGPGKIFIGGLPYHLNEEQ-------VKELLQAFGPLRSFHLVKELSSNLSKGYGFCEYMDINVTDAACLGLNDMRLGDKTLTVRRAMSQE-----------NAKAV------ASAAGTVNTGLEMG-----LDPSRAALQAMSLA---------GIPSLPLGA-----------PSRVIVLLNMVTPEELEDEEEYADILDDIKGECERFGAVPSLLLPRPRDG-IPSAVGKVFVEFGDVQSAQNAATELHGRGFSNRTVIVEFMDEGKYARRE 586 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig900.16855.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig900.16855.1 >prot_H-paniculata_contig900.16855.1 ID=prot_H-paniculata_contig900.16855.1|Name=mRNA_H-paniculata_contig900.16855.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=652bp MAGRGREMTLPAWMTKDGAGGPDPSMAGMPQIPGGLNGGALPQNHFGNGSback to top mRNA from alignment at H-paniculata_contig900:295..14801- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig900.16855.1 ID=mRNA_H-paniculata_contig900.16855.1|Name=mRNA_H-paniculata_contig900.16855.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=14507bp|location=Sequence derived from alignment at H-paniculata_contig900:295..14801- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig900:295..14801- >mRNA_H-paniculata_contig900.16855.1 ID=mRNA_H-paniculata_contig900.16855.1|Name=mRNA_H-paniculata_contig900.16855.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3912bp|location=Sequence derived from alignment at H-paniculata_contig900:295..14801- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |