prot_H-paniculata_contig90.16851.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig90.16851.1
Unique Nameprot_H-paniculata_contig90.16851.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length503
Homology
[Close]
BLAST of mRNA_H-paniculata_contig90.16851.1 vs. uniprot
Match: A0A6H5JD62_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD62_9PHAE)

HSP 1 Score: 139 bits (350), Expect = 9.340e-32
Identity = 236/419 (56.32%), Postives = 267/419 (63.72%), Query Frame = 0 
Query:   57 DVKSEESEIHNFAQAGDVEGVRRCLVNGY-RVDEQDELGCTPVHLAGAMGHTNVVRFLVQEHGAAXXXXXXXXXXXXXXXXXXXXXDMVVLLLRLGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEHGADPIARDSNGMQPSDAVGARRPMDQGARLELLENLERYQLGEYAGMRAPTSSMSSMRRMWMERDNDNTSPSQGQ---GNLDNSA-----------------------------------------AIGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGRH---GTSAEWEMGNAVAGRLDEMRARELGASLRATVQENEAMRRNLE 427
            +VK EESEIH++AQAGDVE VRRCL+ G+ +VDE DELGCTPVHLAGAMGHTNVV+ LV+EH AA     XXXXXXXXXXXXXXXX     LLRLGA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   ADP A+D++G Q  D VGA R + QG + +++  LERYQ+GEY   RAP SS  S+R++W +RD+  ++P       G+L + A                                         + G                                               GR    G S  W +G AVAGRL+ MRARELGASLRA VQENEAM+R +E
Sbjct:   75 EVKVEESEIHHYAQAGDVEEVRRCLLAGFNKVDEVDELGCTPVHLAGAMGHTNVVKLLVEEHRAAVDARDXXXXXXXXXXXXXXXXXXXXXLLRLGAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADPSAKDAHGKQAVDMVGAGRRIPQGLKFDIINTLERYQMGEYGIARAPLSSTRSLRQIWRDRDSGESTPRASTARAGSLPSGAGGEAGQGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTIYSSRGGSISRKGSMSLDGFSTASMGAGGEGGGPLSVRGAAMRHSSRGFSEGDGRGNGGGRSPRWTVGAAVAGRLEGMRARELGASLRAKVQENEAMKRYVE 493
[Close]
BLAST of mRNA_H-paniculata_contig90.16851.1 vs. uniprot
Match: D8LLZ4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLZ4_ECTSI)

HSP 1 Score: 96.7 bits (239), Expect = 1.640e-17
Identity = 111/248 (44.76%), Postives = 137/248 (55.24%), Query Frame = 0 
Query:  251 ADPIARDSNGMQPSDAVGARRPMDQGARLELLENLERYQLGEYAGMRAPTSSMSSMRRMWMERDNDNTSPSQGQGNLDN--SAAIGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSG-------------------------------RHGT---------------------SAEWEMGNAVAGRLDEMRARELGASLRATVQENEAMRRNLEFAQEQVRVLQQKVSQQA 444
            ADP A+D++G Q  D VGA R + QG R +++  LERYQ+GEYA  RAP SS  S+R+MW +RD+  ++P        +  S+A+G     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX           S                                RH +                     S  W +G AVAGRL+ MRARELGASLRA VQENEAM+R +E   E++R LQQK+SQQ+
Sbjct:  148 ADPSAKDAHGKQAIDMVGAGRRIPQGLRFDIINTLERYQMGEYAIARAPLSSTRSLRQMWRDRDSGESTPRASTARAGSLPSSAVGGAGQGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTIYSSRGGSISRKGSMSLDGFSTASMGAGGEGGGPLSVRGAAMRHSSRGFSEGDXXXXXXXXXXXXXRSPRWTVGAAVAGRLEGMRARELGASLRAKVQENEAMKRYVESVTEEMRALQQKISQQS 395
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig90.16851.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JD62_9PHAE9.340e-3256.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LLZ4_ECTSI1.640e-1744.76Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 412..439
NoneNo IPR availablePANTHERPTHR24180:SF1526S PROTEASOME REGULATORY SUBUNIT P28-RELATEDcoord: 130..496
NoneNo IPR availablePANTHERPTHR24180FAMILY NOT NAMEDcoord: 130..496
coord: 65..190
NoneNo IPR availablePANTHERPTHR24180:SF1526S PROTEASOME REGULATORY SUBUNIT P28-RELATEDcoord: 65..190
IPR002110Ankyrin repeatPRINTSPR01415ANKYRINcoord: 143..157
score: 40.79
coord: 94..109
score: 35.0
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 226..255
e-value: 5.0E-4
score: 29.4
coord: 160..189
e-value: 0.032
score: 23.4
coord: 193..222
e-value: 3.4E-5
score: 33.3
coord: 127..156
e-value: 0.0027
score: 27.0
coord: 93..123
e-value: 0.89
score: 18.6
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 226..258
score: 12.075
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 193..225
score: 13.571
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 130..159
score: 11.274
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 160..192
score: 11.14
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 93..126
score: 9.644
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 26..167
e-value: 5.9E-32
score: 112.4
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 168..290
e-value: 8.4E-33
score: 115.2
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 61..266
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 165..257
e-value: 8.3E-17
score: 61.6
coord: 66..158
e-value: 3.4E-11
score: 43.6
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 60..263
score: 56.556

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig90contigH-paniculata_contig90:17408..32381 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig90.16851.1mRNA_H-paniculata_contig90.16851.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig90 16752..32381 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig90.16851.1 ID=prot_H-paniculata_contig90.16851.1|Name=mRNA_H-paniculata_contig90.16851.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=503bp
MSAPELPGSFTNQSEERIGREAPPEARPPAESRAEEKQEEMLEREAGAHE
KGRSGQDVKSEESEIHNFAQAGDVEGVRRCLVNGYRVDEQDELGCTPVHL
AGAMGHTNVVRFLVQEHGAAVDARDGALCTSLHAASEGGHPDMVVLLLRL
GAKINARNRNRQTPLHYACGYGQTEAVHQLTAQGASLGARDVQGNTPLHL
ACARGGADIVRLLLSQGSALDAFNCRRRSPLHLACRAGNTEAAVCLLEHG
ADPIARDSNGMQPSDAVGARRPMDQGARLELLENLERYQLGEYAGMRAPT
SSMSSMRRMWMERDNDNTSPSQGQGNLDNSAAIGSGGMGGAAGGPNLGLG
PGGGGGIPGMLGGGGGGGGGDFGGSRSGAGSGRHGTSAEWEMGNAVAGRL
DEMRARELGASLRATVQENEAMRRNLEFAQEQVRVLQQKVSQQALLHQPS
SSKSVLGEAIIVEDPTVVASSSKSHAGGFAAAPGASFTATSGATTSLSSG
PSP
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom