prot_H-paniculata_contig8992.16844.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig8992.16844.1
Unique Nameprot_H-paniculata_contig8992.16844.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length189
Homology
BLAST of mRNA_H-paniculata_contig8992.16844.1 vs. uniprot
Match: A0A4Y1QWW3_PRUDU (Transposable element protein n=1 Tax=Prunus dulcis TaxID=3755 RepID=A0A4Y1QWW3_PRUDU)

HSP 1 Score: 159 bits (403), Expect = 6.810e-42
Identity = 86/191 (45.03%), Postives = 117/191 (61.26%), Query Frame = 0
Query:    4 VYALRHKSEAVWALKQFEQDITKASRFQIKRLRSDQGGEFTE-AFRQFCAENGIKQEFSAAYTPQQNGVAESSWRSVFKMTRSKMTTANMDRSYWAEAARTAVYYLNRAPTRPHNEGTPYEKWHSTTPKLDHLRVFGCTVYVMFQSQQRCKLDDKAWVGCFWGTS-----YRIYNPGKKSVQLSRNARFDE 188
            VY L  KSEA    KQF+      S   +K LR+D+GGEFT   F ++C  NGIK+E +A YTPQQNGVAE   R++ +M RS +   ++  ++WAEA  TAV+ LNR+PT+   + TP+E WH   PK+D  ++FGCT Y    SQ+R K D+K     F G S     YR+ +P  KS+ +SR+  FDE
Sbjct:  218 VYFLEQKSEAFSVFKQFKAFGENQSGHNLKVLRTDRGGEFTSNEFSEYCKSNGIKRELTARYTPQQNGVAERRNRTIVEMARSMLKAKSLPNTFWAEAIHTAVFILNRSPTKAVKDKTPFEAWHRFKPKVDFFKIFGCTAYAHIPSQKREKFDEKGEKYIFVGYSDQSKAYRLIDPRTKSLVISRDVIFDE 408          
BLAST of mRNA_H-paniculata_contig8992.16844.1 vs. uniprot
Match: A0A4Y1R9H3_PRUDU (Transposable element protein (Fragment) n=1 Tax=Prunus dulcis TaxID=3755 RepID=A0A4Y1R9H3_PRUDU)

HSP 1 Score: 159 bits (403), Expect = 7.650e-42
Identity = 86/191 (45.03%), Postives = 117/191 (61.26%), Query Frame = 0
Query:    4 VYALRHKSEAVWALKQFEQDITKASRFQIKRLRSDQGGEFTE-AFRQFCAENGIKQEFSAAYTPQQNGVAESSWRSVFKMTRSKMTTANMDRSYWAEAARTAVYYLNRAPTRPHNEGTPYEKWHSTTPKLDHLRVFGCTVYVMFQSQQRCKLDDKAWVGCFWGTS-----YRIYNPGKKSVQLSRNARFDE 188
            VY L  KSEA    KQF+      S   +K LR+D+GGEFT   F ++C  NGIK+E +A YTPQQNGVAE   R++ +M RS +   ++  ++WAEA  TAV+ LNR+PT+   + TP+E WH   PK+D  ++FGCT Y    SQ+R K D+K     F G S     YR+ +P  KS+ +SR+  FDE
Sbjct:  455 VYFLEQKSEAFSVFKQFKAFGENQSGHNLKVLRTDRGGEFTSNEFSEYCKSNGIKRELTARYTPQQNGVAERRNRTIVEMARSMLKAKSLPNTFWAEAIHTAVFILNRSPTKAVKDKTPFEAWHRFKPKVDFFKIFGCTAYAHIPSQKREKFDEKGEKYIFVGYSDQSKAYRLIDPRTKSLVISRDVIFDE 645          
BLAST of mRNA_H-paniculata_contig8992.16844.1 vs. uniprot
Match: A0A2I0WJT9_9ASPA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Dendrobium catenatum TaxID=906689 RepID=A0A2I0WJT9_9ASPA)

HSP 1 Score: 149 bits (376), Expect = 1.240e-41
Identity = 81/192 (42.19%), Postives = 110/192 (57.29%), Query Frame = 0
Query:    4 VYALRHKSEAVWALKQFEQDITKASRFQIKRLRSDQGGEFTEA-FRQFCAENGIKQEFSAAYTPQQNGVAESSWRSVFKMTRSKMTTANMDRSYWAEAARTAVYYLNRAPTRPHNEGTPYEKWHSTTPKLDHLRVFGCTVYVMFQSQQRCKLDDKAWVGCFWGTS-----YRIYNPGKKSVQLSRNARFDEE 189
            VY L+ KSE     K F+  +   S  +IK LRSD+GGEF    F  FC E G++ + + AYTPQQNGV E   R+V +M RS +   ++ + +WAEA  TAVY LNR PT+   + TP E W    P +DH R+FGC  YV    Q+R KL++K   G F G S     Y  +N   + +  SR+ +FDE+
Sbjct:   25 VYFLKEKSETFGIFKNFKLLVENQSGQKIKILRSDRGGEFNSCQFEDFCKEEGLEHQLTVAYTPQQNGVTERKNRTVMEMARSMLIAKDIPKKFWAEAVNTAVYVLNRCPTKAVKDITPIEAWSGDKPSVDHFRIFGCLCYVHIPKQKRHKLEEKPDKGIFLGYSSQSKGYIFFNLKTQQLVTSRDVKFDED 216          
BLAST of mRNA_H-paniculata_contig8992.16844.1 vs. uniprot
Match: A0A151T355_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Cajanus cajan TaxID=3821 RepID=A0A151T355_CAJCA)

HSP 1 Score: 159 bits (401), Expect = 1.420e-41
Identity = 81/191 (42.41%), Postives = 116/191 (60.73%), Query Frame = 0
Query:    4 VYALRHKSEAVWALKQFEQDITKASRFQIKRLRSDQGGEFTEA-FRQFCAENGIKQEFSAAYTPQQNGVAESSWRSVFKMTRSKMTTANMDRSYWAEAARTAVYYLNRAPTRPHNEGTPYEKWHSTTPKLDHLRVFGCTVYVMFQSQQRCKLDDKAWVGCFWGTS-----YRIYNPGKKSVQLSRNARFDE 188
            V+ L+ KS+      +F+  +   +  Q+KRLRSD G E+T   F++FC + GI+ + +  YTPQQNGV+E   R+V +M R  +    + +++WAEA  T+VY LN  PT+     TP+E WH  TP ++HL+VFGC  Y +    +R KLD K+ VG F G S     YRIYNP  K + +SRN +FDE
Sbjct:  490 VFFLKKKSDVFANFLKFKFMVENETGLQVKRLRSDNGTEYTAGEFKKFCEQVGIQHQLTVPYTPQQNGVSERKNRTVMEMARCLLFEKGLPKTFWAEAVNTSVYLLNLLPTKALKGNTPFEAWHGRTPSVEHLKVFGCVCYALVPEVKRDKLDQKSEVGIFLGYSSYSKGYRIYNPATKKILVSRNVKFDE 680          
BLAST of mRNA_H-paniculata_contig8992.16844.1 vs. uniprot
Match: A0A2Z7BCE9_9LAMI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Dorcoceras hygrometricum TaxID=472368 RepID=A0A2Z7BCE9_9LAMI)

HSP 1 Score: 156 bits (394), Expect = 5.820e-41
Identity = 81/192 (42.19%), Postives = 121/192 (63.02%), Query Frame = 0
Query:    4 VYALRHKSEAVWALKQFEQDITKASRFQIKRLRSDQGGEFTEA-FRQFCAENGIKQEFSAAYTPQQNGVAESSWRSVFKMTRSKMTTANMDRSYWAEAARTAVYYLNRAPTRPHNEGTPYEKWHSTTPKLDHLRVFGCTVYVMFQSQQRCKLDDKA----WVG-CFWGTSYRIYNPGKKSVQLSRNARFDEE 189
            VY L+ KSEA     +F+  + K     +K LR+D+GGEFT   F Q+C ++GI +E +A YTP+QNGVAE   R++ +M RS + +  +  ++WAEA  TAVY +N +PT+     TPYE W    P ++HL++FGC VYV+  + +R KL++K+    ++G C    +YR+YNP    V +SRN  F+EE
Sbjct:  384 VYFLKFKSEAFGQFFKFKALVEKQKGSNLKILRTDRGGEFTSMEFNQYCEKHGIHKELTAPYTPEQNGVAERKNRTIVEMARSMLKSKGLPYNFWAEAVTTAVYLINLSPTKAVMNKTPYEAWSGKRPSVEHLKIFGCIVYVLINANERHKLEEKSIKCIFIGYCSQSKAYRVYNPATGKVIVSRNTVFNEE 575          
BLAST of mRNA_H-paniculata_contig8992.16844.1 vs. uniprot
Match: A0A2K3KY79_TRIPR (Copia-type polyprotein (Fragment) n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3KY79_TRIPR)

HSP 1 Score: 157 bits (396), Expect = 6.480e-41
Identity = 85/192 (44.27%), Postives = 114/192 (59.38%), Query Frame = 0
Query:    4 VYALRHKSEAVWALKQFEQDITKASRFQIKRLRSDQGGEFTE-AFRQFCAENGIKQEFSAAYTPQQNGVAESSWRSVFKMTRSKMTTANMDRSYWAEAARTAVYYLNRAPTRPHNEGTPYEKWHSTTPKLDHLRVFGCTVYVMFQSQQRCKLDDKAWVGCFWGTS-----YRIYNPGKKSVQLSRNARFDEE 189
            VY L +KS+A    K F+  + K +   IK LR+D+GGEFT   F+++C  NGIK++ +AAYTPQQNGVAE   R+V  M RS +   N+ R +WAEA   A Y LNR PT    E TP E W    P + HLRVFGC  Y      +R KL+DK+     +G S     YR+Y+P  K + +SR+  F+E+
Sbjct:  223 VYFLAYKSDAFTTFKLFKALVEKETDLSIKCLRTDRGGEFTSNEFKEYCKMNGIKRQLTAAYTPQQNGVAERKNRTVMNMVRSLLVEKNVPRKFWAEAVNWAFYVLNRCPTSSVKEMTPVEAWCGVKPSVGHLRVFGCIAYAHVPDARRTKLEDKSRCCVLFGVSEESKAYRLYDPTSKRIIISRDVVFEED 414          
BLAST of mRNA_H-paniculata_contig8992.16844.1 vs. uniprot
Match: A0A6D2IM54_9BRAS (Uncharacterized protein n=2 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2IM54_9BRAS)

HSP 1 Score: 156 bits (395), Expect = 9.180e-41
Identity = 81/190 (42.63%), Postives = 118/190 (62.11%), Query Frame = 0
Query:    5 YALRHKSEAVWALKQFEQDITKASRFQIKRLRSDQGGEFTEA-FRQFCAENGIKQEFSAAYTPQQNGVAESSWRSVFKMTRSKMTTANMDRSYWAEAARTAVYYLNRAPTRPHNEGTPYEKWHSTTPKLDHLRVFGCTVYVMFQSQQRCKLDDKAWVGCFWGTS-----YRIYNPGKKSVQLSRNARFDE 188
            + L  KSEA+ A K+F+    +     +  LRSD+GGE+  A F+ +C ENGIK++ +AAYTPQQNG+AE   RS+  M R  M   ++ R +W EA + AV+ LNR+P+    + TP E+W +  P ++H+RVFGC  Y +   ++R KLD+K+    F G S     YR+YNP  K + +SR+ RFDE
Sbjct:  535 FLLAEKSEALRAFKEFKVAAEREMGLSLVSLRSDRGGEYNSAAFQDYCRENGIKRQLTAAYTPQQNGIAERKNRSIMNMARCMMLGMSVPRRFWPEAVQYAVHVLNRSPSAALGDVTPDERWSNHKPSVEHVRVFGCVAYALVPYERRVKLDEKSIQCVFVGVSKESKAYRLYNPETKKIIISRDVRFDE 724          
BLAST of mRNA_H-paniculata_contig8992.16844.1 vs. uniprot
Match: A0A6D2I006_9BRAS (Integrase catalytic domain-containing protein n=2 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2I006_9BRAS)

HSP 1 Score: 155 bits (393), Expect = 1.290e-40
Identity = 80/190 (42.11%), Postives = 121/190 (63.68%), Query Frame = 0
Query:    5 YALRHKSEAVWALKQFEQDITKASRFQIKRLRSDQGGEF-TEAFRQFCAENGIKQEFSAAYTPQQNGVAESSWRSVFKMTRSKMTTANMDRSYWAEAARTAVYYLNRAPTRPHNEGTPYEKWHSTTPKLDHLRVFGCTVYVMFQSQQRCKLDDKAWVGCFWGTS-----YRIYNPGKKSVQLSRNARFDE 188
            + L  KSEA+   K+F+  + + S   +  LR+D+GGE+ ++AF +FC ENGIK++ +AAYTPQQNGVAE   RSV  MTR  +   ++ R +WAEA + AV+ LNR+P+    + TP EKW    P +++L++FGC  + +   ++R KLD+K+     +G S     YR+YNP  K + +SR+  FDE
Sbjct:   62 FLLTEKSEALQVFKEFKAGVERESGQPLVCLRTDRGGEYCSKAFEEFCRENGIKRQLTAAYTPQQNGVAERKNRSVMNMTRCMLLEMSVPRRFWAEAVQYAVHILNRSPSAALGDITPEEKWSQHKPSVEYLKIFGCVAFALVPYERRIKLDEKSVKCVLFGLSKESKAYRLYNPVTKKIVISRDVHFDE 251          
BLAST of mRNA_H-paniculata_contig8992.16844.1 vs. uniprot
Match: Q9C7Y1_ARATH (Copia-type polyprotein, putative; 28768-32772 n=3 Tax=Arabidopsis thaliana TaxID=3702 RepID=Q9C7Y1_ARATH)

HSP 1 Score: 155 bits (393), Expect = 1.700e-40
Identity = 82/191 (42.93%), Postives = 120/191 (62.83%), Query Frame = 0
Query:    5 YALRHKSEAVWALKQFEQDITKASRFQIKRLRSDQGGEF-TEAFRQFCAENGIKQEFSAAYTPQQNGVAESSWRSVFKMTRSKMTTANMDRSYWAEAARTAVYYLNRAPTRPHNEGTPYEKWHSTTPKLDHLRVFGCTVYVMFQSQQRCKLDDKAWVGCFWGTS-----YRIYNPGKKSVQLSRNARFDEE 189
            Y L  KSE     K+F+ ++ + S  ++  LRSD+GGE+ +  F ++C E GIK++ +AAYTPQQNGVAE   RSV  MTR  +   ++ R +W EA + AVY LNR+P++  N+ TP EKW S  P ++HLR+FG   Y +   Q+R KLD+K+     +G S     YR+Y+P    + +SR+ +FDEE
Sbjct:  532 YLLSEKSETFQFFKEFKAEVERESGKKLVCLRSDRGGEYNSREFDEYCKEFGIKRQLTAAYTPQQNGVAERKNRSVMNMTRCMLMEMSVPRKFWPEAVQYAVYILNRSPSKALNDITPEEKWSSWKPSVEHLRIFGSLAYALVPYQKRIKLDEKSIKCVMFGVSKESKAYRLYDPATGKILISRDVQFDEE 722          
BLAST of mRNA_H-paniculata_contig8992.16844.1 vs. uniprot
Match: A0A4Y1RKD7_PRUDU (Transposable element protein n=1 Tax=Prunus dulcis TaxID=3755 RepID=A0A4Y1RKD7_PRUDU)

HSP 1 Score: 147 bits (372), Expect = 2.910e-40
Identity = 80/192 (41.67%), Postives = 116/192 (60.42%), Query Frame = 0
Query:    4 VYALRHKSEAVWALKQFEQDITKASRFQIKRLRSDQGGEFTEA-FRQFCAENGIKQEFSAAYTPQQNGVAESSWRSVFKMTRSKMTTANMDRSYWAEAARTAVYYLNRAPTRPHNEGTPYEKWHSTTPKLDHLRVFGCTVYVMFQSQQRCKLDDKAWVGCFWG-----TSYRIYNPGKKSVQLSRNARFDEE 189
            V+ L+HKS+A    K+F+  +   S  QIK+LRSD+GGE+T   F +FC E G++++ +  Y+PQQNGVAE   R+V +M R+ M    +   +WAEA  TAVY  NR+PT   +  TP+EK+    P + HLR+FG   Y+   +Q+R KL+D    G F G       YR+ N   + ++LSR+  FDEE
Sbjct:   46 VFFLQHKSQAFNIFKRFKSMVELQSGHQIKKLRSDRGGEYTSLDFSKFCEEMGLERQLTVGYSPQQNGVAERKNRTVMEMARAMMHEKKIPLKFWAEAVNTAVYLQNRSPTSALDNSTPFEKFSGRKPGVKHLRIFGSLCYIHIPTQKRHKLEDTGEKGVFVGYGVCEKGYRVLNLRTQKIELSRSVIFDEE 237          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8992.16844.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A4Y1QWW3_PRUDU6.810e-4245.03Transposable element protein n=1 Tax=Prunus dulcis... [more]
A0A4Y1R9H3_PRUDU7.650e-4245.03Transposable element protein (Fragment) n=1 Tax=Pr... [more]
A0A2I0WJT9_9ASPA1.240e-4142.19Retrovirus-related Pol polyprotein from transposon... [more]
A0A151T355_CAJCA1.420e-4142.41Retrovirus-related Pol polyprotein from transposon... [more]
A0A2Z7BCE9_9LAMI5.820e-4142.19Retrovirus-related Pol polyprotein from transposon... [more]
A0A2K3KY79_TRIPR6.480e-4144.27Copia-type polyprotein (Fragment) n=1 Tax=Trifoliu... [more]
A0A6D2IM54_9BRAS9.180e-4142.63Uncharacterized protein n=2 Tax=Microthlaspi errat... [more]
A0A6D2I006_9BRAS1.290e-4042.11Integrase catalytic domain-containing protein n=2 ... [more]
Q9C7Y1_ARATH1.700e-4042.93Copia-type polyprotein, putative; 28768-32772 n=3 ... [more]
A0A4Y1RKD7_PRUDU2.910e-4041.67Transposable element protein n=1 Tax=Prunus dulcis... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001584Integrase, catalytic corePFAMPF00665rvecoord: 2..79
e-value: 1.3E-14
score: 54.4
IPR001584Integrase, catalytic corePROSITEPS50994INTEGRASEcoord: 1..129
score: 15.469
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 1..151
e-value: 3.1E-22
score: 80.7
NoneNo IPR availablePANTHERPTHR11439:SF265coord: 32..183
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 32..183
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 2..138

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig8992contigH-paniculata_contig8992:8185..8751 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig8992.16844.1mRNA_H-paniculata_contig8992.16844.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig8992 8185..8877 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig8992.16844.1 ID=prot_H-paniculata_contig8992.16844.1|Name=mRNA_H-paniculata_contig8992.16844.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=189bp
MRKVYALRHKSEAVWALKQFEQDITKASRFQIKRLRSDQGGEFTEAFRQF
CAENGIKQEFSAAYTPQQNGVAESSWRSVFKMTRSKMTTANMDRSYWAEA
ARTAVYYLNRAPTRPHNEGTPYEKWHSTTPKLDHLRVFGCTVYVMFQSQQ
RCKLDDKAWVGCFWGTSYRIYNPGKKSVQLSRNARFDEE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001584Integrase_cat-core
IPR036397RNaseH_sf
IPR039537Retrotran_Ty1/copia-like
IPR012337RNaseH-like_sf