prot_H-paniculata_contig8942.16812.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig8942.16812.1
Unique Nameprot_H-paniculata_contig8942.16812.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length225
Homology
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BLAST of mRNA_H-paniculata_contig8942.16812.1 vs. uniprot
Match: D8LPQ1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPQ1_ECTSI)

HSP 1 Score: 91.3 bits (225), Expect = 2.610e-19
Identity = 49/58 (84.48%), Postives = 54/58 (93.10%), Query Frame = 0 
Query:    1 MARKDHPEALTLERFASGKDGQANAFKKKKQANKRKLFEKAQLKRQYAKLLKKEAQAA 58
            MARK+ P+ALTLE+FA+GKDG+ANAFKKKKQA KRKLFEKAQLKRQYAKLLKKEA  A
Sbjct:    1 MARKELPQALTLEKFAAGKDGRANAFKKKKQAKKRKLFEKAQLKRQYAKLLKKEAVTA 58
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8942.16812.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LPQ1_ECTSI2.610e-1984.48Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 40..60
NoneNo IPR availableCOILSCoilCoilcoord: 156..183
IPR013730Fyv7/TAP26PFAMPF08524rRNA_processingcoord: 133..222
e-value: 7.4E-12
score: 45.5
IPR013730Fyv7/TAP26PANTHERPTHR15657UNCHARACTERIZEDcoord: 8..223

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig8942contigH-paniculata_contig8942:2261..9323 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig8942.16812.1mRNA_H-paniculata_contig8942.16812.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig8942 2226..9396 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig8942.16812.1 ID=prot_H-paniculata_contig8942.16812.1|Name=mRNA_H-paniculata_contig8942.16812.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=225bp
MARKDHPEALTLERFASGKDGQANAFKKKKQANKRKLFEKAQLKRQYAKL
LKKEAQAADESRHGQTGDGEPSQQAHTAEDAGPGGGFVFQPHAMAGAGER
KIGVRAIDTKELEGGHDEIRPKKRGGGHEAGDEQAGGSRSQEKQKRKRQG
HRPDPFHEAKAKADQKRREAKERQNDRERQHQEKEGRVKKRKKQHALLSK
RTRVGQPVMKHTMQHLLEKIKAQS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013730Fyv7/TAP26