prot_H-paniculata_contig8939.16807.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig8939.16807.1
Unique Nameprot_H-paniculata_contig8939.16807.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length75
Homology
BLAST of mRNA_H-paniculata_contig8939.16807.1 vs. uniprot
Match: D7FNU5_ECTSI (Elongin-C n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNU5_ECTSI)

HSP 1 Score: 139 bits (351), Expect = 1.490e-41
Identity = 71/74 (95.95%), Postives = 72/74 (97.30%), Query Frame = 0
Query:    1 MVSGTIKAMLSGGFGEAASGQVHFAEISTPILEKVIQFVHYKVRYTNSPTRIPEFPIEPELALELLMAANFLDC 74
            MVSGTIKAMLSGGFGEAASGQVHFAEISTPILEKVIQFV+YKVRYTNS TRIPEF IEPELALELLMAANFLDC
Sbjct:   27 MVSGTIKAMLSGGFGEAASGQVHFAEISTPILEKVIQFVYYKVRYTNSATRIPEFHIEPELALELLMAANFLDC 100          
BLAST of mRNA_H-paniculata_contig8939.16807.1 vs. uniprot
Match: L8GYQ9_ACACA (Elongin-C n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GYQ9_ACACA)

HSP 1 Score: 110 bits (274), Expect = 8.910e-30
Identity = 57/75 (76.00%), Postives = 65/75 (86.67%), Query Frame = 0
Query:    1 MVSGTIKAMLSGG--FGEAASGQVHFAEISTPILEKVIQFVHYKVRYTNSPTRIPEFPIEPELALELLMAANFLD 73
            MVSGTIK+MLSG   F E A G+++F EISTPILEKVIQ+ +YK+RYTNS T IPEFPIEPE+ALELLMAANFLD
Sbjct:   28 MVSGTIKSMLSGPGTFTEQAMGEINFREISTPILEKVIQYFYYKLRYTNSTTEIPEFPIEPEVALELLMAANFLD 102          
BLAST of mRNA_H-paniculata_contig8939.16807.1 vs. uniprot
Match: A0A7S2XYA0_9STRA (Elongin-C n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XYA0_9STRA)

HSP 1 Score: 108 bits (269), Expect = 5.450e-29
Identity = 55/74 (74.32%), Postives = 64/74 (86.49%), Query Frame = 0
Query:    1 MVSGTIKAMLSGGFGEAASGQVHFAEISTPILEKVIQFVHYKVRYTNSPTRIPEFPIEPELALELLMAANFLDC 74
            MVSGTI AMLSG F E+  G+V F EIS+ ILEK+IQ+ +YKVRYTNS +RIP+FPIEPE+ALELLMAANFLDC
Sbjct:   33 MVSGTINAMLSGQFAESR-GEVTFPEISSAILEKIIQYCYYKVRYTNSTSRIPDFPIEPEIALELLMAANFLDC 105          
BLAST of mRNA_H-paniculata_contig8939.16807.1 vs. uniprot
Match: A0A6U1KLA4_9STRA (Elongin-C n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A6U1KLA4_9STRA)

HSP 1 Score: 104 bits (260), Expect = 1.860e-27
Identity = 54/72 (75.00%), Postives = 60/72 (83.33%), Query Frame = 0
Query:    3 SGTIKAMLSGGFGEAASGQVHFAEISTPILEKVIQFVHYKVRYTNSPTRIPEFPIEPELALELLMAANFLDC 74
            SGTIKAMLSG F E+ SG++ F EISTPILEKVIQ+ +YK  Y NS  RIPEF IEPE+ALELLMAANFLDC
Sbjct:   48 SGTIKAMLSGSFTES-SGEIKFPEISTPILEKVIQYFYYKASYKNSQVRIPEFAIEPEVALELLMAANFLDC 118          
BLAST of mRNA_H-paniculata_contig8939.16807.1 vs. uniprot
Match: A0A1V9Z8H2_9STRA (Elongin-C n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A1V9Z8H2_9STRA)

HSP 1 Score: 103 bits (257), Expect = 3.270e-27
Identity = 52/74 (70.27%), Postives = 63/74 (85.14%), Query Frame = 0
Query:    1 MVSGTIKAMLSGGFGEAASGQVHFAEISTPILEKVIQFVHYKVRYTNSPTRIPEFPIEPELALELLMAANFLDC 74
            +VSGTIKAMLSG F E+  G+V F +IS PILEKVIQ+++YK RY+NS  RIP+F IEPE+ALELLMAAN+LDC
Sbjct:   29 LVSGTIKAMLSGHFSES-KGEVRFPDISAPILEKVIQYMYYKKRYSNSNARIPDFGIEPEMALELLMAANYLDC 101          
BLAST of mRNA_H-paniculata_contig8939.16807.1 vs. uniprot
Match: K8Z122_NANGC (Elongin-C n=2 Tax=Monodopsidaceae TaxID=425072 RepID=K8Z122_NANGC)

HSP 1 Score: 103 bits (256), Expect = 4.380e-27
Identity = 50/73 (68.49%), Postives = 64/73 (87.67%), Query Frame = 0
Query:    2 VSGTIKAMLSGGFGEAASGQVHFAEISTPILEKVIQFVHYKVRYTNSPTRIPEFPIEPELALELLMAANFLDC 74
            VS TI+AML+G F E+  G+++F EIST ILEKVIQ+++YKVRYTNSP ++P+F +EPE+ALELLMAANFLDC
Sbjct:   28 VSKTIEAMLAGNFAES-KGEINFPEISTNILEKVIQYLYYKVRYTNSPQKVPDFKMEPEIALELLMAANFLDC 99          
BLAST of mRNA_H-paniculata_contig8939.16807.1 vs. uniprot
Match: F0YER3_AURAN (Elongin-C (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YER3_AURAN)

HSP 1 Score: 102 bits (255), Expect = 5.100e-27
Identity = 53/76 (69.74%), Postives = 62/76 (81.58%), Query Frame = 0
Query:    3 SGTIKAMLSGGFGEA----ASGQVHFAEISTPILEKVIQFVHYKVRYTNSPTRIPEFPIEPELALELLMAANFLDC 74
            SGTIKAMLSG  G      +SG++ F EISTPILEKVIQ+ +YK+RYTNS  RIPEF I+PE+ALELLMA+NFLDC
Sbjct:   17 SGTIKAMLSGPRGPRQFTESSGEIKFPEISTPILEKVIQYFYYKLRYTNSQVRIPEFQIDPEMALELLMASNFLDC 92          
BLAST of mRNA_H-paniculata_contig8939.16807.1 vs. uniprot
Match: A0A6G0WB49_9STRA (Elongin-C n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WB49_9STRA)

HSP 1 Score: 102 bits (255), Expect = 6.970e-27
Identity = 50/74 (67.57%), Postives = 63/74 (85.14%), Query Frame = 0
Query:    1 MVSGTIKAMLSGGFGEAASGQVHFAEISTPILEKVIQFVHYKVRYTNSPTRIPEFPIEPELALELLMAANFLDC 74
            MVSGTIKAML+G F E+  G+V F +IS PILEK+IQ+ ++KVRY+NS  R+P+F IEPE+ALELLMAAN+LDC
Sbjct:   31 MVSGTIKAMLTGHFSES-KGEVRFPDISAPILEKIIQYFYFKVRYSNSNARLPDFTIEPEIALELLMAANYLDC 103          
BLAST of mRNA_H-paniculata_contig8939.16807.1 vs. uniprot
Match: A0A6B2LUV1_9EUKA (Elongin-C n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2LUV1_9EUKA)

HSP 1 Score: 99.4 bits (246), Expect = 1.160e-25
Identity = 50/74 (67.57%), Postives = 63/74 (85.14%), Query Frame = 0
Query:    1 MVSGTIKAMLSGG-FGEAASGQVHFAEISTPILEKVIQFVHYKVRYTNSPTRIPEFPIEPELALELLMAANFLD 73
            MVSGTI++ML GG F E+ +G++ F EI+T ILEKVIQ+ +YKV+YTNS  + P+FPIEPE+ALELLMAANFLD
Sbjct:   17 MVSGTIRSMLDGGGFLESEAGEISFKEINTNILEKVIQYFYYKVKYTNSTGQTPDFPIEPEIALELLMAANFLD 90          
BLAST of mRNA_H-paniculata_contig8939.16807.1 vs. uniprot
Match: A0A1W0A8X8_9STRA (Elongin-C n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A8X8_9STRA)

HSP 1 Score: 99.4 bits (246), Expect = 1.730e-25
Identity = 49/74 (66.22%), Postives = 62/74 (83.78%), Query Frame = 0
Query:    1 MVSGTIKAMLSGGFGEAASGQVHFAEISTPILEKVIQFVHYKVRYTNSPTRIPEFPIEPELALELLMAANFLDC 74
            +VSGTIKAML G F E+  G++ F +IS PILEKVIQ+++YK RY+NS  RIPEF IEPE++LELLMAAN+L+C
Sbjct:   33 LVSGTIKAMLLGQFSES-KGEIRFPDISAPILEKVIQYLYYKKRYSNSNARIPEFNIEPEMSLELLMAANYLEC 105          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8939.16807.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FNU5_ECTSI1.490e-4195.95Elongin-C n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FN... [more]
L8GYQ9_ACACA8.910e-3076.00Elongin-C n=1 Tax=Acanthamoeba castellanii str. Ne... [more]
A0A7S2XYA0_9STRA5.450e-2974.32Elongin-C n=1 Tax=Fibrocapsa japonica TaxID=94617 ... [more]
A0A6U1KLA4_9STRA1.860e-2775.00Elongin-C n=1 Tax=Pelagomonas calceolata TaxID=356... [more]
A0A1V9Z8H2_9STRA3.270e-2770.27Elongin-C n=3 Tax=Saprolegniaceae TaxID=4764 RepID... [more]
K8Z122_NANGC4.380e-2768.49Elongin-C n=2 Tax=Monodopsidaceae TaxID=425072 Rep... [more]
F0YER3_AURAN5.100e-2769.74Elongin-C (Fragment) n=1 Tax=Aureococcus anophagef... [more]
A0A6G0WB49_9STRA6.970e-2767.57Elongin-C n=1 Tax=Aphanomyces euteiches TaxID=1008... [more]
A0A6B2LUV1_9EUKA1.160e-2567.57Elongin-C n=1 Tax=Arcella intermedia TaxID=1963864... [more]
A0A1W0A8X8_9STRA1.730e-2566.22Elongin-C n=1 Tax=Thraustotheca clavata TaxID=7455... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001232S-phase kinase-associated protein 1-likeSMARTSM00512skp1_3coord: 1..74
e-value: 0.0028
score: 8.7
NoneNo IPR availableGENE3D3.30.710.10coord: 1..74
e-value: 1.0E-20
score: 76.0
NoneNo IPR availablePANTHERPTHR20648:SF0ELONGIN-Ccoord: 1..74
IPR039948Elongin-CPANTHERPTHR20648FAMILY NOT NAMEDcoord: 1..74
IPR011333SKP1/BTB/POZ domain superfamilySUPERFAMILY54695POZ domaincoord: 1..74

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig8939contigH-paniculata_contig8939:6595..8248 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig8939.16807.1mRNA_H-paniculata_contig8939.16807.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig8939 6532..9479 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig8939.16807.1 ID=prot_H-paniculata_contig8939.16807.1|Name=mRNA_H-paniculata_contig8939.16807.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=75bp
MVSGTIKAMLSGGFGEAASGQVHFAEISTPILEKVIQFVHYKVRYTNSPT
RIPEFPIEPELALELLMAANFLDC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001232SKP1-like
IPR039948ELC1
IPR011333SKP1/BTB/POZ_sf