prot_H-paniculata_contig8885.16770.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig8885.16770.1
Unique Name	prot_H-paniculata_contig8885.16770.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	117

Homology

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BLAST of mRNA_H-paniculata_contig8885.16770.1 vs. uniprot
Match: D7FWI8_ECTSI (Histone H2B n=5 Tax=Ectocarpus TaxID=2879 RepID=D7FWI8_ECTSI)

HSP 1 Score: 201 bits (510), Expect = 7.890e-65
Identity = 107/116 (92.24%), Postives = 109/116 (93.97%), Query Frame = 0

Query:    1 MAKTPSKKFAKSSKNTGEKKTKNKRLESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 116
            MAKTPSKK AK+ K  G+KK  NKR ESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS
Sbjct:    1 MAKTPSKKSAKAPKKAGDKKRTNKRTESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 116

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BLAST of mRNA_H-paniculata_contig8885.16770.1 vs. uniprot
Match: A0A485K2U0_9STRA (Histone H2B n=29 Tax=Stramenopiles TaxID=33634 RepID=A0A485K2U0_9STRA)

HSP 1 Score: 187 bits (474), Expect = 2.680e-59
Identity = 99/118 (83.90%), Postives = 109/118 (92.37%), Query Frame = 0

Query:    1 MAKTPSKKFAKSSKNTGEK--KTKNKRLESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 116
            MAKTPSKK AK+ K TGEK    K KR+ESYS+YIYKVLKQVHP+TGISKRGMSIMNSFIND+FER+A E+GKL+RYNKK+TLSSRE+QTAVRLMLPGELAKHAVSEGTKAVTKFTSS
Sbjct:    1 MAKTPSKKSAKAPKKTGEKGKNRKVKRIESYSTYIYKVLKQVHPETGISKRGMSIMNSFINDIFERIASEAGKLSRYNKKSTLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 118

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BLAST of mRNA_H-paniculata_contig8885.16770.1 vs. uniprot
Match: A0A6U0X3U9_9STRA (Histone H2B n=2 Tax=Dictyochophyceae TaxID=39119 RepID=A0A6U0X3U9_9STRA)

HSP 1 Score: 186 bits (472), Expect = 7.940e-59
Identity = 96/116 (82.76%), Postives = 107/116 (92.24%), Query Frame = 0

Query:    1 MAKTPSKKFAKSSKNTGEKKTKNKRLESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 116
            MAKTPSKK AK+ K  G+K  K KR ESYSSYIYKVLKQVHP+TGISK+GMSIMNSFIND+FER+AGE+G+L RY+KKATLSSRE+QT+VRLMLPGELAKHAVSEGTKAVTKFTSS
Sbjct:   15 MAKTPSKKSAKAPKKAGDKVKKGKRTESYSSYIYKVLKQVHPETGISKKGMSIMNSFINDIFERLAGEAGRLARYSKKATLSSREIQTSVRLMLPGELAKHAVSEGTKAVTKFTSS 130

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BLAST of mRNA_H-paniculata_contig8885.16770.1 vs. uniprot
Match: A0A836CJ22_9STRA (Histone H2B n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ22_9STRA)

HSP 1 Score: 184 bits (466), Expect = 4.300e-58
Identity = 99/117 (84.62%), Postives = 105/117 (89.74%), Query Frame = 0

Query:    1 MAKTPSKKFAKSSKNTGE-KKTKNKRLESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 116
            MAK PSKK AK+ K   + KK K KR ESY SYIYKVLKQVHPDTGISKRGMSIMNSFINDVFER+A E+GKLTRYNKK+TLSSRE+QTAVRLMLPGELAKHAVSEGTKAVTKFTSS
Sbjct:    1 MAKIPSKKAAKAPKKAADGKKKKAKRTESYGSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERIASEAGKLTRYNKKSTLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 117

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BLAST of mRNA_H-paniculata_contig8885.16770.1 vs. uniprot
Match: H2B_OLILU (Histone H2B n=1 Tax=Olisthodiscus luteus TaxID=83000 RepID=H2B_OLILU)

HSP 1 Score: 182 bits (463), Expect = 1.090e-57
Identity = 95/116 (81.90%), Postives = 107/116 (92.24%), Query Frame = 0

Query:    1 MAKTPSKKFAKSSKNTGEKKTKNKRLESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 116
            MAKTPSKK AK+ K  G K+  NKR+E+YSSYIYKVLKQVHPDTGISKRGMSIMNSFIND+FER+AGE+ +L RYNK++TLSSRE+QTAVRLMLPGELAKHAVSEGTKAVTKFTS+
Sbjct:    1 MAKTPSKKAAKAPKKAGSKR--NKRVETYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDIFERLAGEASRLARYNKRSTLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFTSN 114

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BLAST of mRNA_H-paniculata_contig8885.16770.1 vs. uniprot
Match: A0A836CJT3_9STRA (Histone H2B n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJT3_9STRA)

HSP 1 Score: 184 bits (466), Expect = 2.780e-56
Identity = 99/117 (84.62%), Postives = 105/117 (89.74%), Query Frame = 0

Query:    1 MAKTPSKKFAKSSKNTGE-KKTKNKRLESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 116
            MAK PSKK AK+ K   + KK K KR ESY SYIYKVLKQVHPDTGISKRGMSIMNSFINDVFER+A E+GKLTRYNKK+TLSSRE+QTAVRLMLPGELAKHAVSEGTKAVTKFTSS
Sbjct:  134 MAKIPSKKAAKAPKKAADGKKKKAKRTESYGSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERIASEAGKLTRYNKKSTLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 250

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BLAST of mRNA_H-paniculata_contig8885.16770.1 vs. uniprot
Match: A0A7S4ACZ1_9STRA (Histone H2B n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4ACZ1_9STRA)

HSP 1 Score: 177 bits (448), Expect = 2.460e-55
Identity = 95/119 (79.83%), Postives = 106/119 (89.08%), Query Frame = 0

Query:    1 MAKTPSKKFAKSSKNTGEKKT---KNKRLESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 116
            MAKTPSKK A ++KN  +K     K KR+ESYS+YIYKVLKQVHPDTGISK+GMSIMNSFIND+FER+A E+GKL  YNKKATLSSRE+QTAVRLMLPGELAKHAVSEGTKAVTKF+SS
Sbjct:    1 MAKTPSKKAAPAAKNPPKKGPGGKKKKRVESYSTYIYKVLKQVHPDTGISKKGMSIMNSFINDIFERIATEAGKLATYNKKATLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFSSS 119

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BLAST of mRNA_H-paniculata_contig8885.16770.1 vs. uniprot
Match: B8BX20_THAPS (Histone H2B n=13 Tax=Bacillariophyta TaxID=2836 RepID=B8BX20_THAPS)

HSP 1 Score: 177 bits (448), Expect = 2.540e-55
Identity = 94/120 (78.33%), Postives = 106/120 (88.33%), Query Frame = 0

Query:    1 MAKTPSK----KFAKSSKNTGEKKTKNKRLESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 116
            MAKTPSK    K AK +    +KK   KR+ESYS+YIYKVLKQVHPDTGISK+GMSIMNSFIND+FER+AGE+GKL+ YNKKATLSSRE+QTAVRLMLPGELAKHAVSEGTKAVTKF+S+
Sbjct:    1 MAKTPSKQAPAKAAKKAATGDKKKRSKKRVESYSTYIYKVLKQVHPDTGISKKGMSIMNSFINDIFERIAGEAGKLSTYNKKATLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFSSA 120

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BLAST of mRNA_H-paniculata_contig8885.16770.1 vs. uniprot
Match: B7FWR8_PHATC (Histone H2B n=13 Tax=Bacillariophyta TaxID=2836 RepID=B7FWR8_PHATC)

HSP 1 Score: 175 bits (444), Expect = 9.100e-55
Identity = 92/116 (79.31%), Postives = 101/116 (87.07%), Query Frame = 0

Query:    1 MAKTPSKKFAKSSKNTGEKKTKNKRLESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 116
            MAKTPSK+ AK+ K         KR E+YSSYIYKVLKQVHPDTGISK+GMSIMNSFIND+FER+A E+GKL  YNKKATLSSRE+QTAVRLMLPGELAKHAVSEGTKAVTKF+SS
Sbjct:    1 MAKTPSKQSAKAPKKAATGTKSKKRTETYSSYIYKVLKQVHPDTGISKKGMSIMNSFINDIFERIATEAGKLATYNKKATLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFSSS 116

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BLAST of mRNA_H-paniculata_contig8885.16770.1 vs. uniprot
Match: M4B6M3_HYAAE (Histone H2B n=49 Tax=Oomycota TaxID=4762 RepID=M4B6M3_HYAAE)

HSP 1 Score: 175 bits (444), Expect = 9.400e-55
Identity = 93/117 (79.49%), Postives = 105/117 (89.74%), Query Frame = 0

Query:    1 MAKTPSKKFAKSSKNTGEKKTKN-KRLESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 116
            MAKTPSKK AK+   TG       KR+ESYS+YIYKVL+QVHP+TGISKRGMSIMNSFIND+FER+A E+GKL+RYNKK+TLSSRE+QTAVRLMLPGELAKHAVSEGTKAVTKFTS+
Sbjct:    1 MAKTPSKKAAKTVAKTGXXXXXXXKRVESYSTYIYKVLRQVHPETGISKRGMSIMNSFINDIFERIASEAGKLSRYNKKSTLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFTSA 117

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig8885.16770.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig8885.16770.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FWI8_ECTSI	7.890e-65	92.24	Histone H2B n=5 Tax=Ectocarpus TaxID=2879 RepID=D7...	[more]
A0A485K2U0_9STRA	2.680e-59	83.90	Histone H2B n=29 Tax=Stramenopiles TaxID=33634 Rep...	[more]
A0A6U0X3U9_9STRA	7.940e-59	82.76	Histone H2B n=2 Tax=Dictyochophyceae TaxID=39119 R...	[more]
A0A836CJ22_9STRA	4.300e-58	84.62	Histone H2B n=2 Tax=Tribonema minus TaxID=303371 R...	[more]
H2B_OLILU	1.090e-57	81.90	Histone H2B n=1 Tax=Olisthodiscus luteus TaxID=830...	[more]
A0A836CJT3_9STRA	2.780e-56	84.62	Histone H2B n=1 Tax=Tribonema minus TaxID=303371 R...	[more]
A0A7S4ACZ1_9STRA	2.460e-55	79.83	Histone H2B n=1 Tax=Pseudo-nitzschia australis Tax...	[more]
B8BX20_THAPS	2.540e-55	78.33	Histone H2B n=13 Tax=Bacillariophyta TaxID=2836 Re...	[more]
B7FWR8_PHATC	9.100e-55	79.31	Histone H2B n=13 Tax=Bacillariophyta TaxID=2836 Re...	[more]
M4B6M3_HYAAE	9.400e-55	79.49	Histone H2B n=49 Tax=Oomycota TaxID=4762 RepID=M4B...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000558	Histone H2B	PRINTS	PR00621	HISTONEH2B	coord: 29..47 score: 84.56 coord: 100..113 score: 92.65 coord: 87..100 score: 90.61 coord: 70..87 score: 56.83 coord: 48..68 score: 67.66
IPR000558	Histone H2B	SMART	SM00427	h2b3	coord: 19..115 e-value: 2.8E-69 score: 246.1
IPR000558	Histone H2B	PANTHER	PTHR23428	HISTONE H2B	coord: 4..116
IPR000558	Histone H2B	PROSITE	PS00357	HISTONE_H2B	coord: 84..106
IPR009072	Histone-fold	GENE3D	1.10.20.10		coord: 1..116 e-value: 2.2E-55 score: 188.0
IPR009072	Histone-fold	SUPERFAMILY	47113	Histone-fold	coord: 4..116
IPR007125	Histone H2A/H2B/H3	PFAM	PF00125	Histone	coord: 10..92 e-value: 3.1E-18 score: 66.4
None	No IPR available	PANTHER	PTHR23428:SF196	HISTONE H2B TYPE 1-N	coord: 4..116

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig8885	contig	H-paniculata_contig8885:4549..4899 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig8885.16770.1	mRNA_H-paniculata_contig8885.16770.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig8885 4549..5332 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig8885.16770.1 ID=prot_H-paniculata_contig8885.16770.1|Name=mRNA_H-paniculata_contig8885.16770.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=117bp
MAKTPSKKFAKSSKNTGEKKTKNKRLESYSSYIYKVLKQVHPDTGISKRG
MSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAK
HAVSEGTKAVTKFTSS*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000558	Histone_H2B
IPR009072	Histone-fold
IPR007125	Histone_H2A/H2B/H3