prot_H-paniculata_contig887.16761.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig887.16761.1
Unique Nameprot_H-paniculata_contig887.16761.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length371
Homology
BLAST of mRNA_H-paniculata_contig887.16761.1 vs. uniprot
Match: A0A6H5K9F0_9PHAE (Cyclin N-terminal domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K9F0_9PHAE)

HSP 1 Score: 355 bits (912), Expect = 5.530e-115
Identity = 204/326 (62.58%), Postives = 244/326 (74.85%), Query Frame = 0
Query:    1 KTDAYRPRQESLACMENEDFLAMRKAVVNWFANVSVSYKFTNETVVAALSNFDRYVAVTLEPVTNYLLLQLAAYVALLVASKMSELAPLRMKSLANLTGRMFTPLQVQKCELDMISKLHFRLAPPSADETLHCLATLVYNIWPAN--------IPL-ADILSTASCYLKKARARTCWFRHSPYTLAVAALATAFNSLGLGQRKHRLLRECNARARKVTGRGVDFHGVAACAAAMSGDGRTAAVAAAAARA------VRGGTESPVC---NKFGKDGWGSPTGVAQGAELLQEVAFSAVG----EGC--------LPLLQDLSPATS 296
            KT+AYRP + S   ME+ +FL MR AVVNWFA VSVSY F NETVVAALS+FDRYV++T+ PV +++LLQLAAYVALL+ASKM E  PLRM+SLANLTGRMFTPLQV++ E+DMISKL+FRLAPPS DE LHCL++L+     ++        +PL +D+LS +S YLK+ARARTCWFRH+PYTLAVAALATA+NS+GLG+ + RLLREC+AR+R VTGRGVD HGVAACA AM  D R AA               RG TESPVC   N   KDGWGSPTGVAQGAELLQ+ AFSAVG    +G         +PL++D SP T+
Sbjct:   71 KTNAYRPLETSWQVMEDAEFLDMRGAVVNWFAKVSVSYDFANETVVAALSHFDRYVSLTVTPVNDHMLLQLAAYVALLIASKMGETCPLRMRSLANLTGRMFTPLQVKQLEMDMISKLNFRLAPPSPDEALHCLSSLLLRSSSSSDNKSGRGGVPLHSDVLSASSHYLKRARARTCWFRHAPYTLAVAALATAYNSVGLGKERRRLLRECDARSRAVTGRGVDVHGVAACADAMVRDERAAAXXXXXXXXXXNSGHARGSTESPVCGGSNTAAKDGWGSPTGVAQGAELLQKAAFSAVGVRGDQGIGSGGGGSGVPLVEDFSPLTT 396          
BLAST of mRNA_H-paniculata_contig887.16761.1 vs. uniprot
Match: A0A5B8MH95_9CHLO (Cyclin n=2 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MH95_9CHLO)

HSP 1 Score: 60.8 bits (146), Expect = 1.290e-6
Identity = 33/104 (31.73%), Postives = 62/104 (59.62%), Query Frame = 0
Query:   23 MRKAVVNWFANVSVSYKFTNETVVAALSNFDRYVAVTLEPVTNYLLLQLAAYVALLVASKMSELAPLRMKSLANLTGRMFTPLQVQKCELDMISKLHFRLAPPS 126
            MR     W   +S+ +KF  ET++ A+  FDR++ ++ EPV+  +L QL A  ++L+ASKM E+    +K  + ++   F+  +V++ E+ ++  L +R+  PS
Sbjct:  145 MRTICCGWMVELSLEFKFEQETLLLAIRIFDRFLTLSPEPVSRKVL-QLVAISSMLIASKMEEVVHPSVKDFSRMSADTFSAKEVKRMEVSILQILDYRIHSPS 247          
BLAST of mRNA_H-paniculata_contig887.16761.1 vs. uniprot
Match: A0A7S3VCP7_9STRA (Hypothetical protein n=3 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3VCP7_9STRA)

HSP 1 Score: 57.0 bits (136), Expect = 1.880e-5
Identity = 51/167 (30.54%), Postives = 80/167 (47.90%), Query Frame = 0
Query:   24 RKAVVNWFANVSVSYKFTNETVVAALSNFDRYVAVTLEPVTNYLLLQLAAYVALLVASKMSELAPLRMKSLANLTGRMFTPLQVQKCELDMISKLHFRLAPPSADETLHCLATLVYNIWPANIPL-ADILSTASCYLKKARARTCWFRHSPYTLAVAALATAFNSLG 189
            R+ +  W   V   + F  + V  AL+  DRY+A  L PV N  + QLAA   L +A KM+E   L + +  +L+   F    V   E  ++  L +++ PP    T    A  +  I P N+   A+IL       + +     +  H P T+A+AAL TAF+++G
Sbjct:   79 REKICEWCYQVVDHFDFNRQVVAIALNYLDRYLA--LRPV-NRKIFQLAAMTCLFIAIKMNESKVLSLSAFLSLSRGYFQAEHVLAMEHAVLRALSWKVNPP----TPIIQAKYLLFILPKNVQRKAEILEITRFLTEISVCDYFFVPHKPSTIAIAALLTAFDTVG 238          
BLAST of mRNA_H-paniculata_contig887.16761.1 vs. uniprot
Match: A0A085MAF5_9BILA (Uncharacterized protein n=1 Tax=Trichuris suis TaxID=68888 RepID=A0A085MAF5_9BILA)

HSP 1 Score: 57.0 bits (136), Expect = 2.920e-5
Identity = 34/107 (31.78%), Postives = 58/107 (54.21%), Query Frame = 0
Query:   23 MRKAVVNWFANVSVSYKFTNETVVAALSNFDRYVAVTLEPVTNYLLLQLAAYVALLVASKMSELAPLRMKSLANLTGRMFTPLQVQKCELDMISKLHFRLAPPSADE 129
            MR  +V+W  +V + + F  ET+   ++  DR++A           LQL   V ++VASK+ E+ P ++K  A +T   +T  +V K E  M+   HF++ PP+ +E
Sbjct:  254 MRSILVDWLVDVCLEFNFCQETLHVGVTLTDRFLAGMNVSKDK---LQLVGVVGVMVASKLEEIYPPKVKDFAAITDETYTVSEVLKMERIMLDFFHFKVHPPTVNE 357          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig887.16761.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5K9F0_9PHAE5.530e-11562.58Cyclin N-terminal domain-containing protein n=2 Ta... [more]
A0A5B8MH95_9CHLO1.290e-631.73Cyclin n=2 Tax=Chloropicon primus TaxID=1764295 Re... [more]
A0A7S3VCP7_9STRA1.880e-530.54Hypothetical protein n=3 Tax=Chaetoceros debilis T... [more]
A0A085MAF5_9BILA2.920e-531.78Uncharacterized protein n=1 Tax=Trichuris suis Tax... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006671Cyclin, N-terminalPFAMPF00134Cyclin_Ncoord: 7..122
e-value: 3.0E-17
score: 62.5
NoneNo IPR availableGENE3D1.10.472.10coord: 8..123
e-value: 4.0E-27
score: 97.0
NoneNo IPR availableGENE3D1.10.472.10coord: 4..224
e-value: 4.0E-27
score: 97.0
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 63..81
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..62
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 82..371
IPR039361CyclinPIRSFPIRSF001771Cyclin_A_B_D_Ecoord: 8..133
e-value: 6.1E-12
score: 43.3
IPR039361CyclinPANTHERPTHR10177CYCLINEcoord: 21..183
IPR036915Cyclin-like superfamilySUPERFAMILY47954Cyclin-likecoord: 15..122

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig887contigH-paniculata_contig887:7684..11139 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig887.16761.1mRNA_H-paniculata_contig887.16761.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig887 7683..11139 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig887.16761.1 ID=prot_H-paniculata_contig887.16761.1|Name=mRNA_H-paniculata_contig887.16761.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=371bp
KTDAYRPRQESLACMENEDFLAMRKAVVNWFANVSVSYKFTNETVVAALS
NFDRYVAVTLEPVTNYLLLQLAAYVALLVASKMSELAPLRMKSLANLTGR
MFTPLQVQKCELDMISKLHFRLAPPSADETLHCLATLVYNIWPANIPLAD
ILSTASCYLKKARARTCWFRHSPYTLAVAALATAFNSLGLGQRKHRLLRE
CNARARKVTGRGVDFHGVAACAAAMSGDGRTAAVAAAAARAVRGGTESPV
CNKFGKDGWGSPTGVAQGAELLQEVAFSAVGEGCLPLLQDLSPATSMRAP
TIASPQTFNTRVTSGGTRVTMAAVPIATRAGASRGGRELSVGRGVGTGDG
GALCGVDTSGGSRLPRHGQKR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006671Cyclin_N
IPR039361Cyclin
IPR036915Cyclin-like_sf