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Homology
BLAST of mRNA_H-paniculata_contig887.16761.1 vs. uniprot
Match: A0A6H5K9F0_9PHAE (Cyclin N-terminal domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K9F0_9PHAE) HSP 1 Score: 355 bits (912), Expect = 5.530e-115 Identity = 204/326 (62.58%), Postives = 244/326 (74.85%), Query Frame = 1
Query: 1 KTDAYRPRQESLACMENEDFLAMRKAVVNWFANVSVSYKFTNETVVAALSNFDRYVAVTLEPVTNYLLLQLAAYVALLVASKMSELAPLRMKSLANLTGRMFTPLQVQKCELDMISKLHFRLAPPSADETLHCLATLVYNIWPAN--------IPL-ADILSTASCYLKKARARTCWFRHSPYTLAVAALATAFNSLGLGQRKHRLLRECNARARKVTGRGVDFHGVAACAAAMSGDGRTAAVAAAAARA------VRGGTESPVC---NKFGKDGWGSPTGVAQGAELLQEVAFSAVG----EGC--------LPLLQDLSPATS 888
KT+AYRP + S ME+ +FL MR AVVNWFA VSVSY F NETVVAALS+FDRYV++T+ PV +++LLQLAAYVALL+ASKM E PLRM+SLANLTGRMFTPLQV++ E+DMISKL+FRLAPPS DE LHCL++L+ ++ +PL +D+LS +S YLK+ARARTCWFRH+PYTLAVAALATA+NS+GLG+ + RLLREC+AR+R VTGRGVD HGVAACA AM D R AA RG TESPVC N KDGWGSPTGVAQGAELLQ+ AFSAVG +G +PL++D SP T+
Sbjct: 71 KTNAYRPLETSWQVMEDAEFLDMRGAVVNWFAKVSVSYDFANETVVAALSHFDRYVSLTVTPVNDHMLLQLAAYVALLIASKMGETCPLRMRSLANLTGRMFTPLQVKQLEMDMISKLNFRLAPPSPDEALHCLSSLLLRSSSSSDNKSGRGGVPLHSDVLSASSHYLKRARARTCWFRHAPYTLAVAALATAYNSVGLGKERRRLLRECDARSRAVTGRGVDVHGVAACADAMVRDERAAAXXXXXXXXXXNSGHARGSTESPVCGGSNTAAKDGWGSPTGVAQGAELLQKAAFSAVGVRGDQGIGSGGGGSGVPLVEDFSPLTT 396
BLAST of mRNA_H-paniculata_contig887.16761.1 vs. uniprot
Match: A0A5B8MH95_9CHLO (Cyclin n=2 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MH95_9CHLO) HSP 1 Score: 60.8 bits (146), Expect = 1.290e-6 Identity = 33/104 (31.73%), Postives = 62/104 (59.62%), Query Frame = 1
Query: 67 MRKAVVNWFANVSVSYKFTNETVVAALSNFDRYVAVTLEPVTNYLLLQLAAYVALLVASKMSELAPLRMKSLANLTGRMFTPLQVQKCELDMISKLHFRLAPPS 378
MR W +S+ +KF ET++ A+ FDR++ ++ EPV+ +L QL A ++L+ASKM E+ +K + ++ F+ +V++ E+ ++ L +R+ PS
Sbjct: 145 MRTICCGWMVELSLEFKFEQETLLLAIRIFDRFLTLSPEPVSRKVL-QLVAISSMLIASKMEEVVHPSVKDFSRMSADTFSAKEVKRMEVSILQILDYRIHSPS 247
BLAST of mRNA_H-paniculata_contig887.16761.1 vs. uniprot
Match: A0A7S3VCP7_9STRA (Hypothetical protein n=3 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3VCP7_9STRA) HSP 1 Score: 57.0 bits (136), Expect = 1.880e-5 Identity = 51/167 (30.54%), Postives = 80/167 (47.90%), Query Frame = 1
Query: 70 RKAVVNWFANVSVSYKFTNETVVAALSNFDRYVAVTLEPVTNYLLLQLAAYVALLVASKMSELAPLRMKSLANLTGRMFTPLQVQKCELDMISKLHFRLAPPSADETLHCLATLVYNIWPANIPL-ADILSTASCYLKKARARTCWFRHSPYTLAVAALATAFNSLG 567
R+ + W V + F + V AL+ DRY+A L PV N + QLAA L +A KM+E L + + +L+ F V E ++ L +++ PP T A + I P N+ A+IL + + + H P T+A+AAL TAF+++G
Sbjct: 79 REKICEWCYQVVDHFDFNRQVVAIALNYLDRYLA--LRPV-NRKIFQLAAMTCLFIAIKMNESKVLSLSAFLSLSRGYFQAEHVLAMEHAVLRALSWKVNPP----TPIIQAKYLLFILPKNVQRKAEILEITRFLTEISVCDYFFVPHKPSTIAIAALLTAFDTVG 238
BLAST of mRNA_H-paniculata_contig887.16761.1 vs. uniprot
Match: A0A085MAF5_9BILA (Uncharacterized protein n=1 Tax=Trichuris suis TaxID=68888 RepID=A0A085MAF5_9BILA) HSP 1 Score: 57.0 bits (136), Expect = 2.920e-5 Identity = 34/107 (31.78%), Postives = 58/107 (54.21%), Query Frame = 1
Query: 67 MRKAVVNWFANVSVSYKFTNETVVAALSNFDRYVAVTLEPVTNYLLLQLAAYVALLVASKMSELAPLRMKSLANLTGRMFTPLQVQKCELDMISKLHFRLAPPSADE 387
MR +V+W +V + + F ET+ ++ DR++A LQL V ++VASK+ E+ P ++K A +T +T +V K E M+ HF++ PP+ +E
Sbjct: 254 MRSILVDWLVDVCLEFNFCQETLHVGVTLTDRFLAGMNVSKDK---LQLVGVVGVMVASKLEEIYPPKVKDFAAITDETYTVSEVLKMERIMLDFFHFKVHPPTVNE 357
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 317.0 |
| Seed ortholog evalue | 1.2e-83 |
| Seed eggNOG ortholog | 2880.D8LFC1 |
| KEGG ko | ko:K06627 |
| KEGG Pathway | ko04110,ko04152,ko04218,ko04914,ko05161,ko05165,ko05169,ko05203,map04110,map04152,map04218,map04914,map05161,map05165,map05169,map05203 |
| KEGG Module | M00693 |
| Hectar predicted targeting category | other localisation |
| EggNOG free text desc. | cell division |
| EggNOG OGs | COG5024@1,KOG0654@2759 |
| Ec32 ortholog description | Cyclin-like |
| Ec32 ortholog | Ec-07_005740.1 |
| COG Functional cat. | D |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko00002,ko03032,ko03036 |
| Exons | 4 |
| Model size | 1114 |
| Cds size | 1113 |
| Stop | 0 |
| Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig887.16761.1 >prot_H-paniculata_contig887.16761.1 ID=prot_H-paniculata_contig887.16761.1|Name=mRNA_H-paniculata_contig887.16761.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=371bp
KTDAYRPRQESLACMENEDFLAMRKAVVNWFANVSVSYKFTNETVVAALS
NFDRYVAVTLEPVTNYLLLQLAAYVALLVASKMSELAPLRMKSLANLTGR
MFTPLQVQKCELDMISKLHFRLAPPSADETLHCLATLVYNIWPANIPLAD
ILSTASCYLKKARARTCWFRHSPYTLAVAALATAFNSLGLGQRKHRLLRE
CNARARKVTGRGVDFHGVAACAAAMSGDGRTAAVAAAAARAVRGGTESPV
CNKFGKDGWGSPTGVAQGAELLQEVAFSAVGEGCLPLLQDLSPATSMRAP
TIASPQTFNTRVTSGGTRVTMAAVPIATRAGASRGGRELSVGRGVGTGDG
GALCGVDTSGGSRLPRHGQKR back to topmRNA from alignment at H-paniculata_contig887:7683..11139- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig887.16761.1 ID=mRNA_H-paniculata_contig887.16761.1|Name=mRNA_H-paniculata_contig887.16761.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3457bp|location=Sequence derived from alignment at H-paniculata_contig887:7683..11139- (Halopteris paniculata Hal_grac_a_UBK monoicous)
AAGACAGATGCCTACCGTCCACGACAAGAGAGCTTGGCGTGCATGGAAAA
CGAAGGTGGGTCATTTCGCATGACAACTTGGCATATTTTCGAATATATGT
ACCTCATGGTGTGCTGACTTCTACATCCCAAACGGGTGGTCGCTTTGGAG
TACCGCGTTTGATTGGTGAGGATGCTTGTCCATGTCGCCAGCTCGTGTTC
ATAGCCCAGTACAGACAAGATGGGTACAGTACAGACAGACGGAGATCTTC
CGAGGAAAAAAGTAGGTATTGTATGTATGGTGTACTGTAGTTGTGAAATT
TTGCTCTTGAAGGGTTCTGCTTGCCCATATTTTTGCTCATGAATTGCCGA
AGTCTTTTGCACAACTTGCACACAATGTATAATGTATGTAGCAAGTCGAA
AGTCTCCATGTGCGGAACTTAAACATCGCGAATTGAAGTAAACGGGCTAC
GAGCGTACCTTCGGGAGGGTGGCCATGAATCAGCTGCCCGCACATGTTAC
ACTACCCTGTTTCGTTCTCGAAGGTGCAGCTTGAAGAGCTTGCACACACC
AAGATTACATGGTCTTTCAACTGTTCAATTATTTTTCGTATTTCGTGTGT
GTTGAGAGGCCTTGTTGAAACTGTACCCTGCACTCTGTTTTCCAATGTGG
TGGCTGTTCTGTTTTGCCTTAATGTTATAACTACTACGCAGATTTCCTCG
CGATGAGGAAAGCTGTTGTCAACTGGTTCGCCAACGTATCCGTTTCGTAT
AAATTCACAAACGAGACTGTGGTCGCTGCTTTGAGCAACTTCGACAGGTG
AGGCCGCGTTGATGCACTGCGAGTTGTTACGTTGTCGGGTGCGAAAATAA
TGGATGAGAGAAATGTTGCCAATCTTGCCCATCACACCCTGGACCTTCGC
TATGCCATCAATTGTTTTGTCATGTATACATACATACAGCGCATGAAATA
TTAAATATTTCTCCGCTGTTCATCCTGGATTACTATGAAGGTTGGTGGTC
CTTCACGAATATGAGAATGCTGTCTGTTCTTTTTGACTATCGTTGAGTAA
ACGAGCCGTTGTTTAGGAATCAGCGTGATTTGTACGTTCAAGCTAATCCC
TTCGACACTCGAGCAGTATACCCAGGTTTTCTGCGGTGTTGAATCCAGCC
ACACACCTGTCGTCCTCTGTCCCACGTCGTGATTATCTGCGATTATTCTT
GGATCAATTTCATTTTTCCCAGATACGTCGCGGTCACTTTGGAACCAGTT
ACCAACTATCTTCTGCTTCAACTCGCGGCGTACGTCGCGCTTTTGGTGGC
GTCCAAGATGAGTGAACTTGCACCGCTCCGGATGAAGAGTCTAGCCAATC
TCACGGGTCGGATGTTCACCCCCCTTCAGGTGCGTTTGTTTTATCATGTG
CAACGCCCCCCGCCTTAGTGGAGGCCCTCTTAGTGTCCGCGCTAAGATAT
ATGACTATTTCTGCAGAGCTTTGTCCTCATTCCCATTAATAGTATTAGTA
GTATGATTGTTGAATCGTTTGAGTGTCGCAGATCTGCGGGCCGTCACAGA
TGTCAGTCATGTTGGAGGTTCAGCCGTGCGGGAAATGGTTCTGATTTCGG
CTAGACAAATCTTGTGCCACACTGTTACTAACTTGAATAGTACGGAAGGT
TTTGGTGATGAGCAAACCGTGCATAGAACATATTTTGAGACGCGGCGCGG
TGTTCAATTTGATCCATGCCTTTATTTTGTGATGTGGCAGAAGCCCAGCT
CGCTATTGTCGGAACCCCATCAAACTCGTGTTGATTTTGCTGACTCGATG
CCACCAATAATAATATTTTGCTCTTCCGTGCTGTAATGTGCGCTCAAGAG
CACAACACTGGCAGCCCCAACCACGTTGCCGCCAAGAAACCGTTTATACA
CCGAAGCCCACACCGTCTGTAGTTTACTGCACTTTGCTGTGCTGTGTATT
CTTTCGACCCAAATCTTATACTTCACCCGTACGACCGTGAGCTGATTGCG
ACCGCTCCTTGAGGTTTTTATTCGTCAAGCACTGAATTGAGTTATAATCA
AGTTTGTCTGAGCAAATGTCGATAAATATAAACGTGTAGCTAGGTCTACT
TCTAGTGGCTTAGATCTGCCTCTAGTGGCTTGGATCTATCACCAGCAGAT
TTCCGACGGGAACAACCTTTGGAGTGAAATGTCATCAGAATCGTCTGTAT
GGATCGATGCTCCGCGCCATGTGAAGCATTTCTAACAAGAGTAATTCCTG
TAATATTAATGAGTTGTATCTAGATCGTTGCAACACTGAACAACACCATC
ACTAAGGGCAGTCCTCAAGAAGGACATGATCGAGGTGTAACATATTAAGA
CAAGTAATGTTCGAAAAGTTCATCGGCAAGATCCCACCCTTCCCTTGGAC
GTAACTCATTCAACATCTGCTTGTTTATGTGCCACACAACATCATATCCA
ACCCCTGAACGTTTTTCATGCATCGTCATACATGAATAGCACGGACATTT
CCTTGATGGTAGGTGAATGGCTTGGTGACACGTCGCGAAATCAATTGAGA
ATGAGCAACATCTCCAACTCAACATTCCATGAGCCGTTTCGTCCAGATCC
CTTCCTTGCCTTGACCCTTGACCCGCCCGTGTCTGTTCTCCGGACTCCTG
ACAATGCCCAGGTCCAAAAGTGCGAATTGGATATGATTTCGAAGCTGCAC
TTCCGGCTTGCCCCACCGAGTGCCGATGAAACCCTCCATTGCCTGGCTAC
CCTGGTCTACAACATCTGGCCCGCGAACATCCCATTAGCTGACATCCTGT
CGACGGCTTCGTGCTATCTGAAAAAGGCTCGGGCACGAACCTGTTGGTTC
CGGCACTCCCCGTACACCTTGGCGGTTGCCGCACTGGCCACGGCTTTCAA
CAGCCTAGGCCTGGGGCAACGCAAGCACCGACTACTGCGAGAGTGTAATG
CACGCGCGCGCAAGGTTACGGGGCGAGGGGTTGACTTCCACGGTGTGGCC
GCATGCGCTGCGGCTATGTCCGGCGATGGGCGCACGGCGGCCGTTGCTGC
TGCGGCCGCGCGCGCCGTGCGCGGGGGAACCGAATCGCCAGTGTGCAACA
AGTTTGGAAAGGACGGATGGGGATCGCCCACAGGTGTCGCTCAAGGTGCG
GAGTTGCTGCAAGAGGTGGCGTTCTCCGCGGTGGGGGAAGGGTGTCTTCC
GCTACTGCAAGATTTGTCGCCGGCGACCTCTATGCGTGCGCCCACCATCG
CTTCCCCGCAGACGTTCAACACGCGAGTGACATCGGGCGGCACACGAGTA
ACCATGGCGGCGGTACCGATTGCGACGAGAGCTGGCGCGAGCAGGGGCGG
TCGGGAGTTGTCTGTTGGCAGAGGCGTCGGTACCGGCGACGGGGGAGCGT
TGTGCGGGGTGGACACGTCGGGGGGGTCAAGATTGCCACGACACGGTCAA
AAGCGAG back to topCoding sequence (CDS) from alignment at H-paniculata_contig887:7683..11139- >mRNA_H-paniculata_contig887.16761.1 ID=mRNA_H-paniculata_contig887.16761.1|Name=mRNA_H-paniculata_contig887.16761.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2226bp|location=Sequence derived from alignment at H-paniculata_contig887:7683..11139- (Halopteris paniculata Hal_grac_a_UBK monoicous)
AAGACAGATGCCTACCGTCCACGACAAGAGAGCTTGGCGTGCATGGAAAA
CGAAGAAGACAGATGCCTACCGTCCACGACAAGAGAGCTTGGCGTGCATG
GAAAACGAAGATTTCCTCGCGATGAGGAAAGCTGTTGTCAACTGGTTCGC
CAACGTATCCGTTTCGTATAAATTCACAAACGAGACTGTGGTCGCTGCTT
TGAGCAACTTCGACAGATTTCCTCGCGATGAGGAAAGCTGTTGTCAACTG
GTTCGCCAACGTATCCGTTTCGTATAAATTCACAAACGAGACTGTGGTCG
CTGCTTTGAGCAACTTCGACAGATACGTCGCGGTCACTTTGGAACCAGTT
ACCAACTATCTTCTGCTTCAACTCGCGGCGTACGTCGCGCTTTTGGTGGC
GTCCAAGATGAGTGAACTTGCACCGCTCCGGATGAAGAGTCTAGCCAATC
TCACGGGTCGGATGTTCACCCCCCTTCAGATACGTCGCGGTCACTTTGGA
ACCAGTTACCAACTATCTTCTGCTTCAACTCGCGGCGTACGTCGCGCTTT
TGGTGGCGTCCAAGATGAGTGAACTTGCACCGCTCCGGATGAAGAGTCTA
GCCAATCTCACGGGTCGGATGTTCACCCCCCTTCAGGTCCAAAAGTGCGA
ATTGGATATGATTTCGAAGCTGCACTTCCGGCTTGCCCCACCGAGTGCCG
ATGAAACCCTCCATTGCCTGGCTACCCTGGTCTACAACATCTGGCCCGCG
AACATCCCATTAGCTGACATCCTGTCGACGGCTTCGTGCTATCTGAAAAA
GGCTCGGGCACGAACCTGTTGGTTCCGGCACTCCCCGTACACCTTGGCGG
TTGCCGCACTGGCCACGGCTTTCAACAGCCTAGGCCTGGGGCAACGCAAG
CACCGACTACTGCGAGAGTGTAATGCACGCGCGCGCAAGGTTACGGGGCG
AGGGGTTGACTTCCACGGTGTGGCCGCATGCGCTGCGGCTATGTCCGGCG
ATGGGCGCACGGCGGCCGTTGCTGCTGCGGCCGCGCGCGCCGTGCGCGGG
GGAACCGAATCGCCAGTGTGCAACAAGTTTGGAAAGGACGGATGGGGATC
GCCCACAGGTGTCGCTCAAGGTGCGGAGTTGCTGCAAGAGGTGGCGTTCT
CCGCGGTGGGGGAAGGGTGTCTTCCGCTACTGCAAGATTTGTCGCCGGCG
ACCTCTATGCGTGCGCCCACCATCGCTTCCCCGCAGACGTTCAACACGCG
AGTGACATCGGGCGGCACACGAGTAACCATGGCGGCGGTACCGATTGCGA
CGAGAGCTGGCGCGAGCAGGGGCGGTCGGGAGTTGTCTGTTGGCAGAGGC
GTCGGTACCGGCGACGGGGGAGCGTTGTGCGGGGTGGACACGTCGGGGGG
GTCAAGATTGCCACGACACGGTCAAAAGCGAGTCCAAAAGTGCGAATTGG
ATATGATTTCGAAGCTGCACTTCCGGCTTGCCCCACCGAGTGCCGATGAA
ACCCTCCATTGCCTGGCTACCCTGGTCTACAACATCTGGCCCGCGAACAT
CCCATTAGCTGACATCCTGTCGACGGCTTCGTGCTATCTGAAAAAGGCTC
GGGCACGAACCTGTTGGTTCCGGCACTCCCCGTACACCTTGGCGGTTGCC
GCACTGGCCACGGCTTTCAACAGCCTAGGCCTGGGGCAACGCAAGCACCG
ACTACTGCGAGAGTGTAATGCACGCGCGCGCAAGGTTACGGGGCGAGGGG
TTGACTTCCACGGTGTGGCCGCATGCGCTGCGGCTATGTCCGGCGATGGG
CGCACGGCGGCCGTTGCTGCTGCGGCCGCGCGCGCCGTGCGCGGGGGAAC
CGAATCGCCAGTGTGCAACAAGTTTGGAAAGGACGGATGGGGATCGCCCA
CAGGTGTCGCTCAAGGTGCGGAGTTGCTGCAAGAGGTGGCGTTCTCCGCG
GTGGGGGAAGGGTGTCTTCCGCTACTGCAAGATTTGTCGCCGGCGACCTC
TATGCGTGCGCCCACCATCGCTTCCCCGCAGACGTTCAACACGCGAGTGA
CATCGGGCGGCACACGAGTAACCATGGCGGCGGTACCGATTGCGACGAGA
GCTGGCGCGAGCAGGGGCGGTCGGGAGTTGTCTGTTGGCAGAGGCGTCGG
TACCGGCGACGGGGGAGCGTTGTGCGGGGTGGACACGTCGGGGGGGTCAA
GATTGCCACGACACGGTCAAAAGCGA back to top
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