prot_H-paniculata_contig8865.16756.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig8865.16756.1
Unique Nameprot_H-paniculata_contig8865.16756.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length741
Homology
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BLAST of mRNA_H-paniculata_contig8865.16756.1 vs. uniprot
Match: A0A6H5JT00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT00_9PHAE)

HSP 1 Score: 60.1 bits (144), Expect = 9.610e-6
Identity = 34/94 (36.17%), Postives = 46/94 (48.94%), Query Frame = 0 
Query:   82 WGQQLATSCGQLVSGADSSSRRLCLVL--------NHRFRLPNKMGP-----------QQCASVDCPERPSYGIAGSRKAEFCAQHARAGMVNV 156
            WG  LA  C  L     +  R +            +HR R+ ++ G             QC   +C +RP+YG+AGS+K EFC+QHAR GMVNV
Sbjct:    4 WGANLAAGCLYLDCTPTNVQRPIFFPARRLLGHSYHHRTRVAHRRGXXXXXXXGGSRMSQCGHENCTKRPTYGVAGSKKREFCSQHARDGMVNV 97
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BLAST of mRNA_H-paniculata_contig8865.16756.1 vs. uniprot
Match: D7FI73_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI73_ECTSI)

HSP 1 Score: 59.3 bits (142), Expect = 1.180e-5
Identity = 23/35 (65.71%), Postives = 29/35 (82.86%), Query Frame = 0 
Query:  122 QCASVDCPERPSYGIAGSRKAEFCAQHARAGMVNV 156
            QC   +C +RP+YG+AGS+K EFC+QHAR GMVNV
Sbjct:    3 QCGHANCTKRPTYGVAGSKKREFCSQHARDGMVNV 37
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8865.16756.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JT00_9PHAE9.610e-636.17Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FI73_ECTSI1.180e-565.71EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig8865contigH-paniculata_contig8865:1901..4123 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig8865.16756.1mRNA_H-paniculata_contig8865.16756.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig8865 1825..4397 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig8865.16756.1 ID=prot_H-paniculata_contig8865.16756.1|Name=mRNA_H-paniculata_contig8865.16756.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=741bp
MSKGPSGKIFKLPTAHLKFSRQHSLIPPWIYRVEAFLPESVGSVCSICLH
TFTAYIALAEERWYSLPYPGTSSVFCCSGKYWGQQLATSCGQLVSGADSS
SRRLCLVLNHRFRLPNKMGPQQCASVDCPERPSYGIAGSRKAEFCAQHAR
AGMVNVVRRTCGNEGCSTTPSYGIAGSRKAQFCAQHRKVGMVGVVSKICG
NEDCSRYSSYGIAGSKKAEFCAQHARAGMVGVKNQRCKDEDCIIRPSYGI
AGSKKAEFCAHHARAGMVGVKNQRCKHEGCTTRPSYGIAGSKKTEFCSQH
ARAGMVNVKHQTCGNEGCFRLPSYAVAGSRKAEFCSQHAKAEMVDVMRKT
CGIEDCSTRPSYGVVGSKKAEFCSPHARAGMVDVVRKTCGNEDCTTTPTY
GIAGSRKAQFCSQHARAGMVDVKNQMCNHEGCTTSASHGLLSSRKAEFCS
PHAKAGMVDVRHQRCCHEGCSTQPSYGLASRRKAECCAKHATPDMVNVKN
PMCRHEGCITRPSYAIAGSRKAEFCSQHASTGMIQTKSKKCFNKGCSNWG
QYQGKFRHQHAAEMPNVLDEGERARDGGNSNRGVVEDGMDGAAGKRARKR
GRPADAYFHANNGDSSPCGMYAGARQGGTTLPLASGQAAAGEDENVGEAE
ASVKVELAVASPAHVVGGVSTRIGWNVPSSGRSNADDRSSSDGSGKRLRG
TTSSGHLFTVADVVTGEAGVKMELAVSNSPRSVCVPVTKY*
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