prot_H-paniculata_contig8812.16726.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig8812.16726.1
Unique Nameprot_H-paniculata_contig8812.16726.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length107
Homology
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BLAST of mRNA_H-paniculata_contig8812.16726.1 vs. uniprot
Match: A0A6H5JIM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIM0_9PHAE)

HSP 1 Score: 88.6 bits (218), Expect = 1.350e-18
Identity = 44/107 (41.12%), Postives = 62/107 (57.94%), Query Frame = 0 
Query:   25 GPPKKVQRKSHIPRVMFTCAVSRPDPSLDSDGKIGIWRVCVFKQAHRNSARRKQ-----------------------RQQYDFDVTIDAAWYQEWYKDPFLP-LKEK 107
            GPP+ V  +SH+P++M   A +RPDP+ D DGKIGIWR+CV + A R+S +                          +++Y+FD TIDA WY++WY D  LP +KEK
Sbjct:  181 GPPR-VPHESHLPKIMVIVANARPDPAHDFDGKIGIWRICVIETAQRSSKKSTSSTAPSTRSGWREPPHGRNRPAIVQEEYEFDCTIDAEWYKDWYIDVLLPAIKEK 286
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BLAST of mRNA_H-paniculata_contig8812.16726.1 vs. uniprot
Match: A0A024U717_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U717_9STRA)

HSP 1 Score: 51.2 bits (121), Expect = 3.470e-5
Identity = 30/83 (36.14%), Postives = 45/83 (54.22%), Query Frame = 0 
Query:   26 PPKKVQRKSHIPRVMFTCAVSRPDPSLDSDGKIGIWRVCVFKQAHRNSARRKQRQQYDFDVTIDAAWYQEWYKDPFLP-LKEK 107
            PP+ +Q K+HI +VMF  AV+RP      DGKIG W +    +A R+S  R    +    +T+    Y+E+     +P +KEK
Sbjct:  193 PPRPLQSKAHITKVMFLVAVARP--RCGWDGKIGCWALVEESKALRSSVNRPAGARVIKTLTVTREIYREYLIKSVIPAIKEK 273
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8812.16726.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JIM0_9PHAE1.350e-1841.12Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A024U717_9STRA3.470e-536.14Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR47169:SF1coord: 26..94
NoneNo IPR availablePANTHERPTHR47169FAMILY NOT NAMEDcoord: 26..94

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig8812contigH-paniculata_contig8812:1105..1425 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig8812.16726.1mRNA_H-paniculata_contig8812.16726.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig8812 1105..1425 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig8812.16726.1 ID=prot_H-paniculata_contig8812.16726.1|Name=mRNA_H-paniculata_contig8812.16726.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=107bp
STKRGFTEFATGIASTCSPEKKGWGPPKKVQRKSHIPRVMFTCAVSRPDP
SLDSDGKIGIWRVCVFKQAHRNSARRKQRQQYDFDVTIDAAWYQEWYKDP
FLPLKEK
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