prot_H-paniculata_contig875.16673.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig875.16673.1
Unique Nameprot_H-paniculata_contig875.16673.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length180
Homology
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BLAST of mRNA_H-paniculata_contig875.16673.1 vs. uniprot
Match: D8LBK4_ECTSI (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBK4_ECTSI)

HSP 1 Score: 84.0 bits (206), Expect = 1.360e-15
Identity = 51/115 (44.35%), Postives = 63/115 (54.78%), Query Frame = 0 
Query:   11 FLAEQAELYSGFTRTKLRNVAPHRWSDLAAVLGLVILNSEDIKATFAREGKECPLAEWDDEIREL-CLVKPVAEIIINAQGTHVSTAPDIVLQLWALKTVILNTVVPLNIWSPKR 124
            F  EQ   YS     KL NVAP RWS ++ VL   I+N   I   +AREG   PLA  ++EI EL  L+KPVAE+I+  Q THV T    VL L  LK    N    L++ +P R
Sbjct:  228 FQEEQVRHYSQCLHRKLVNVAPQRWSGVSGVLEATIVNRVGIDGVYAREGSVNPLAPHENEIDELYSLIKPVAELIVTCQQTHVPTGQAAVLGLATLKLSTFNVDARLDVLTPVR 342
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BLAST of mRNA_H-paniculata_contig875.16673.1 vs. uniprot
Match: A0A6H5KEK6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEK6_9PHAE)

HSP 1 Score: 82.8 bits (203), Expect = 2.790e-15
Identity = 50/115 (43.48%), Postives = 62/115 (53.91%), Query Frame = 0 
Query:   11 FLAEQAELYSGFTRTKLRNVAPHRWSDLAAVLGLVILNSEDIKATFAREGKECPLAEWDDEIREL-CLVKPVAEIIINAQGTHVSTAPDIVLQLWALKTVILNTVVPLNIWSPKR 124
            F  EQ   YS     KL NVAP RWS +  VL   I+N  DI   +AREG   PLA  + +I EL  ++KPVAE+I+  Q THV T     L L ALK    N    L++ +P R
Sbjct:   54 FQEEQVRHYSQCLHRKLVNVAPQRWSGVGGVLEATIVNRVDIDGVYAREGSVNPLAPHEHDIDELYSVIKPVAELIVTYQQTHVPTGQAAALGLAALKLSTFNVDARLDVLTPAR 168
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig875.16673.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LBK4_ECTSI1.360e-1544.35Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5KEK6_9PHAE2.790e-1543.48Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig875contigH-paniculata_contig875:23429..24344 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig875.16673.1mRNA_H-paniculata_contig875.16673.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig875 23175..24640 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig875.16673.1 ID=prot_H-paniculata_contig875.16673.1|Name=mRNA_H-paniculata_contig875.16673.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=180bp
MLNCALVEGNFLAEQAELYSGFTRTKLRNVAPHRWSDLAAVLGLVILNSE
DIKATFAREGKECPLAEWDDEIRELCLVKPVAEIIINAQGTHVSTAPDIV
LQLWALKTVILNTVVPLNIWSPKRTPAMGAIATARASAAVESSTHIMRAH
TDLMEAAQKRASSSVIPSTGDGGKSDMGR*
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