mRNA_H-paniculata_contig875.16673.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig875.16673.1 vs. uniprot
Match: A0A6H5JZ82_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ82_9PHAE) HSP 1 Score: 166 bits (419), Expect = 4.780e-42 Identity = 99/238 (41.60%), Postives = 130/238 (54.62%), Query Frame = 3
Query: 69 WKLESRLLAVRQFNPKPEILNNIRLSEVLETFLKAVLDEFNLNISNISSSTIDSGSDVKRLGKELFPGRWE*CICHMLNCALVE-----------GN--------------------------FLAEQAELYSGFTRTKLRNVAPHRWSDLAAVLGLVILNSEDIKATFAREGKECPLAEWDDEIREL-CLVKPVAEIIINAQGTHVSTAPDIVLQLWALKTVILNTVVPLNIWSPKR 668
W L SRL+AVRQFNP E+L + RLS +L+ +L++VL+E+ L++S + S+T D+GSDVKRL L PG WE C+CHM+NCALVE GN F EQ + Y+ KL N AP RWS + VL VI+N I + EGK+ PL +EI EL ++KP A++I+ Q T V T VL L ALK + LN PL I +P R
Sbjct: 192 WVLRSRLIAVRQFNPTKELLEDNRLSALLQKYLESVLEEYGLDVSLLFSATSDAGSDVKRLCDVLLPGLWEWCVCHMINCALVEAFGTHVDPAKSGNPGARKVITTVKKVVEHIRKSPRAKAIFEEEQVQQYAQCYHRKLVNAAPQRWSGVTNVLEAVIVNRAAIDGVYTAEGKDSPLTSLTEEIDELYSIIKPAAQVIVKCQQTSVPTGQVAVLALAALKLITLNVDSPLEILTPAR 429
BLAST of mRNA_H-paniculata_contig875.16673.1 vs. uniprot
Match: D8LBK4_ECTSI (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBK4_ECTSI) HSP 1 Score: 162 bits (410), Expect = 5.620e-41 Identity = 104/242 (42.98%), Postives = 130/242 (53.72%), Query Frame = 3
Query: 66 DWKLESRLLAVRQFNPKPEILNNIRLSEVLETFLKAVLDEFNLNISNISSSTIDSGSDVK-RLGKELFPGRWE*CICHMLNCALVE-----------GN----------------------------FLAEQAELYSGFTRTKLRNVAPHRWSDLAAVLGLVILNSEDIKATFAREGKECPLAEWDDEIREL-CLVKPVAEIIINAQGTHVSTAPDIVLQLWALKTVILNTVVPLNIWSPKR 668
+W+L+SRLLAVRQFNP E+ N RLS VLE +L VL+EF L++S + S+T D+GSDVK RL L P W+ C+CHMLNC+LVE GN F EQ YS KL NVAP RWS ++ VL I+N I +AREG PLA ++EI EL L+KPVAE+I+ Q THV T VL L LK N L++ +P R
Sbjct: 101 EWRLKSRLLAVRQFNPTLEMFENERLSAVLEKYLTDVLEEFGLDVSMLFSATSDAGSDVKHRLCHTLIPRLWKSCVCHMLNCSLVEAIGTRVDSRKPGNPAARKVVLAVKKVVEHIRRSKSPGAKAIFQEEQVRHYSQCLHRKLVNVAPQRWSGVSGVLEATIVNRVGIDGVYAREGSVNPLAPHENEIDELYSLIKPVAELIVTCQQTHVPTGQAAVLGLATLKLSTFNVDARLDVLTPVR 342
BLAST of mRNA_H-paniculata_contig875.16673.1 vs. uniprot
Match: D8LFP4_ECTSI (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFP4_ECTSI) HSP 1 Score: 151 bits (381), Expect = 8.970e-37 Identity = 96/244 (39.34%), Postives = 124/244 (50.82%), Query Frame = 3
Query: 69 WKLESRLLAVRQFNPKPEILNNIRLSEVLETFLKAVLDEFNLNISNISSSTIDSGSDVKRLGKELFPGRWE*CICHMLNCALVEGN-------------------------------------FLAEQAELYSGFTRTKLRNVAPHRWSDLAAVLGLVILNSEDIKATFAREGKECPLAEWDDEIREL-CLVKPVAEIIINAQGTHVSTAPDIVLQLWALKTVILNTVVPLNIWSPKRTPAMGA 686
W+L+S LLAVRQFNP PE L N RLSE+LE ++ AVL+EF ++ S + S+T D+G DVKRL L PG E C+CHML+ +L E F EQ +S + K+ N AP RWS + L + N I +A EG++ PL+ EI EL L++PVAE+I Q TH T VL L ALK LN PL+I +P P GA
Sbjct: 213 WQLKSYLLAVRQFNPTPETLKNERLSELLEKYVFAVLEEFGIDASLLFSATSDAGGDVKRLCSVLLPGLREWCVCHMLSDSLAEAVGTCVGPQQPGGRAARNVVMAVKKAVERVRKSPASKDIFTEEQVIQFSQCSNRKVVNAAPQRWSGVTGALEATVTNRAAINGVYAEEGEDSPLSPHVHEIDELYSLIQPVAEVIATCQQTHFPTGQAAVLGLAALKLSTLNADAPLDILTPASKPTQGA 456
BLAST of mRNA_H-paniculata_contig875.16673.1 vs. uniprot
Match: A0A6H5JNY1_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNY1_9PHAE) HSP 1 Score: 140 bits (353), Expect = 7.500e-34 Identity = 82/209 (39.23%), Postives = 110/209 (52.63%), Query Frame = 3
Query: 69 WKLESRLLAVRQFNPKPEILNNIRLSEVLETFLKAVLDEFNLNISNISSSTIDSGSDVKRLGKELFPGRWE*CICHMLNCALVEGN-------------------------------------FLAEQAELYSGFTRTKLRNVAPHRWSDLAAVLGLVILNSEDIKATFAREGKECPLAEWDDEIREL-CLVKPVAEIIINAQGTHVST 581
W L SRL+AVRQFNP E+L + RLS +L+ +L+ VL E+ L++S + S+T D+GSDVKRL L PG WE C+CHM+NCA+V+ F EQ Y+ KL N AP RWS + VL VI+N I +A EGK PL DEI EL ++KP A++I++ + ST
Sbjct: 13 WVLRSRLIAVRQFNPTKELLEDNRLSTLLQKYLERVLAEYGLDVSLLFSATSDAGSDVKRLCDVLLPGLWEWCVCHMMNCAVVKAFGMHVDPAKSRNPGARKVITTVKTIVEHIRKSPRAKAIFEEEQVRQYAQCYHRKLVNAAPQRWSGVTNVLEAVIVNRPAIDGVYAAEGKHSPLTSLTDEIDELHYIIKPAAQVIVSGERPATST 221
BLAST of mRNA_H-paniculata_contig875.16673.1 vs. uniprot
Match: A0A6H5KEC8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEC8_9PHAE) HSP 1 Score: 132 bits (333), Expect = 1.820e-32 Identity = 76/190 (40.00%), Postives = 100/190 (52.63%), Query Frame = 3
Query: 69 WKLESRLLAVRQFNPKPEILNNIRLSEVLETFLKAVLDEFNLNISNISSSTIDSGSDVKRLGKELFPGRWE*CICHMLNCALVEGN---------------------------------------FLAEQAELYSGFTRTKLRNVAPHRWSDLAAVLGLVILNSEDIKATFAREGKECPLAEWDDEIREL 521
W L SRL+AVRQFNP E+L + RLS +L+ +L++VL+E+ L++S + S+T D+GSDVKRL L PG WE C+CHM+NCALVE F EQ Y+ KL N AP RWS + VL VI+N + A + EGK+ PL +EI EL
Sbjct: 113 WVLRSRLIAVRQFNPTKELLEDNRLSALLQKYLESVLEEYGLDVSLLFSATSDAGSDVKRLCDVLLPGLWEWCVCHMINCALVEAFGTHVNPAKSINPRCTQSDHDGEKGCGVHPQISQSEVGAIFEQEQVRQYAQCYHRKLVNAAPQRWSGVTNVLEAVIVNRAAVNAVYTTEGKDSPLTSLTNEIDEL 302
BLAST of mRNA_H-paniculata_contig875.16673.1 vs. uniprot
Match: A0A6H5KWS6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWS6_9PHAE) HSP 1 Score: 132 bits (332), Expect = 3.890e-31 Identity = 76/188 (40.43%), Postives = 99/188 (52.66%), Query Frame = 3
Query: 69 WKLESRLLAVRQFNPKPEILNNIRLSEVLETFLKAVLDEFNLNISNISSSTIDSGSDVKRLGKELFPGRWE*CICHMLNCALVEGN-------------------------------------FLAEQAELYSGFTRTKLRNVAPHRWSDLAAVLGLVILNSEDIKATFAREGKECPLAEWDDEIREL 521
W L SRL+AVRQFNP E+L + RLS +++ L++VL+E+ L++S + S+T DSGSDVKRL L PG WE C+CHM+NCALVE F EQ Y+ KL N AP RWS + VL VI+N + A + EGK+ PL +EI EL
Sbjct: 266 WVLRSRLIAVRQFNPTKELLEDNRLSALVQKHLESVLEEYGLDVSLVFSATSDSGSDVKRLCDVLLPGLWEWCVCHMINCALVEAFGTHVDSAKSRNPGARKVITMGKKVVEHIPKSPRAKAIFEQEQVRQYAQCYHRKLVNAAPQRWSGVTNVLEAVIVNRAAVNAVYTTEGKDSPLTSLTNEIDEL 453
BLAST of mRNA_H-paniculata_contig875.16673.1 vs. uniprot
Match: A0A6H5JM59_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM59_9PHAE) HSP 1 Score: 101 bits (251), Expect = 8.010e-21 Identity = 72/203 (35.47%), Postives = 105/203 (51.72%), Query Frame = 3
Query: 69 WKLESRLLAVRQFNPKPEILNNIRLSEVLETFLKAVLDEFNLNISNISSSTIDSGSDVKRLGKELFPGRWE*CICHMLNCALVEGNFLAEQAELYSGFTRTKLRNV--APHRWSDLAAVLGLVILNSEDIKATFAREGKECPLAEWDDEIREL-CLVKPVAEIIINAQGTHVSTAPDIVLQLWALKTVILNTVVPLNIWSPKR 668
W L SRL+AVRQFNP E+L + RL +L+ +L++VL+E+ L++S + S+T D+GSD G + P + + + V +A + ++ V A + VL VI+N I + EGK+ PL DEI EL ++KP A++I+ Q T V T VL L ALK LN PL I +P R
Sbjct: 94 WVLRSRLIAVRQFNPTKELLEDNRLLALLQKYLESVLEEYGLDVSLLFSATSDAGSDA--FGTHVDPAK---------SRSPVVRKVIATVKMVMEHIRKSPRAKVSFAVVIGCGVTNVLEAVIVNRAAIDGVYTTEGKDSPLTSLTDEIDELFSIIKPAAQVIVKCQQTSVPTVQLAVLALAALKLTTLNVDSPLEILTPAR 285
BLAST of mRNA_H-paniculata_contig875.16673.1 vs. uniprot
Match: A0A6H5KEK6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEK6_9PHAE) HSP 1 Score: 82.8 bits (203), Expect = 9.430e-14 Identity = 50/115 (43.48%), Postives = 62/115 (53.91%), Query Frame = 3
Query: 327 FLAEQAELYSGFTRTKLRNVAPHRWSDLAAVLGLVILNSEDIKATFAREGKECPLAEWDDEIREL-CLVKPVAEIIINAQGTHVSTAPDIVLQLWALKTVILNTVVPLNIWSPKR 668
F EQ YS KL NVAP RWS + VL I+N DI +AREG PLA + +I EL ++KPVAE+I+ Q THV T L L ALK N L++ +P R
Sbjct: 54 FQEEQVRHYSQCLHRKLVNVAPQRWSGVGGVLEATIVNRVDIDGVYAREGSVNPLAPHEHDIDELYSVIKPVAELIVTYQQTHVPTGQAAALGLAALKLSTFNVDARLDVLTPAR 168
BLAST of mRNA_H-paniculata_contig875.16673.1 vs. uniprot
Match: A0A6H5KHW5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHW5_9PHAE) HSP 1 Score: 67.4 bits (163), Expect = 1.190e-9 Identity = 39/69 (56.52%), Postives = 49/69 (71.01%), Query Frame = 3
Query: 66 DWKLESRLLAVRQFNPKPEILNNIRLSEVLETFLKAVLDEFNLNISNISSSTIDSGSDVK-RLGKELFP 269
+W+L SRLLAVRQFNP PE+ N RLS++LE L VL EF L++ + S+T D+GSDVK RL L P
Sbjct: 114 EWRLRSRLLAVRQFNPTPEMFENERLSKLLEKHLTDVL-EFGLDVYMLFSATSDAGSDVKHRLCYILIP 181 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig875.16673.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig875.16673.1 >prot_H-paniculata_contig875.16673.1 ID=prot_H-paniculata_contig875.16673.1|Name=mRNA_H-paniculata_contig875.16673.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=180bp MLNCALVEGNFLAEQAELYSGFTRTKLRNVAPHRWSDLAAVLGLVILNSEback to top mRNA from alignment at H-paniculata_contig875:23175..24640- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig875.16673.1 ID=mRNA_H-paniculata_contig875.16673.1|Name=mRNA_H-paniculata_contig875.16673.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1466bp|location=Sequence derived from alignment at H-paniculata_contig875:23175..24640- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig875:23175..24640- >mRNA_H-paniculata_contig875.16673.1 ID=mRNA_H-paniculata_contig875.16673.1|Name=mRNA_H-paniculata_contig875.16673.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1080bp|location=Sequence derived from alignment at H-paniculata_contig875:23175..24640- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |