prot_H-paniculata_contig8748.16669.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig8748.16669.1
Unique Nameprot_H-paniculata_contig8748.16669.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length77
Homology
[Close]
BLAST of mRNA_H-paniculata_contig8748.16669.1 vs. uniprot
Match: A0A6H5L717_9PHAE (SMI1_KNR4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L717_9PHAE)

HSP 1 Score: 95.5 bits (236), Expect = 5.670e-23
Identity = 53/99 (53.54%), Postives = 63/99 (63.64%), Query Frame = 0 
Query:    1 MTHVAEEGNRRKGDMTNAEMKQSVLDV-----------------------QVLEKALDANVPEELRALMSIQDGQIWFSEQQAMACKAIVAETLEMEGR 76
            MTHVAEEGN RKG MT  E+ QSVLDV                       Q LEKA D  +PEELR++M+IQDGQ+WFSE+QA+ CKA+VA   +MEGR
Sbjct:    1 MTHVAEEGNPRKGGMTYDEINQSVLDVESWFKKHARGCLDNAEGAQDADIQALEKATDTTIPEELRSIMTIQDGQLWFSEKQALTCKAMVAAAFKMEGR 99
[Close]
BLAST of mRNA_H-paniculata_contig8748.16669.1 vs. uniprot
Match: D7G8J0_ECTSI (Ubiquitin family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8J0_ECTSI)

HSP 1 Score: 64.7 bits (156), Expect = 1.660e-11
Identity = 27/43 (62.79%), Postives = 37/43 (86.05%), Query Frame = 0 
Query:   34 LDANVPEELRALMSIQDGQIWFSEQQAMACKAIVAETLEMEGR 76
            +D  +PEELR++M+IQDGQ+WFSE+QA+ CKA+VA   +MEGR
Sbjct:    1 MDTTIPEELRSIMTIQDGQLWFSEKQALTCKAMVAAAFKMEGR 43
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8748.16669.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L717_9PHAE5.670e-2353.54SMI1_KNR4 domain-containing protein n=1 Tax=Ectoca... [more]
D7G8J0_ECTSI1.660e-1162.79Ubiquitin family protein n=1 Tax=Ectocarpus silicu... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig8748contigH-paniculata_contig8748:1007..3717 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig8748.16669.1mRNA_H-paniculata_contig8748.16669.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig8748 1007..3717 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig8748.16669.1 ID=prot_H-paniculata_contig8748.16669.1|Name=mRNA_H-paniculata_contig8748.16669.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=77bp
MTHVAEEGNRRKGDMTNAEMKQSVLDVQVLEKALDANVPEELRALMSIQD
GQIWFSEQQAMACKAIVAETLEMEGRT
back to top