prot_H-paniculata_contig8742.16666.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig8742.16666.1
Unique Nameprot_H-paniculata_contig8742.16666.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length194
Homology
BLAST of mRNA_H-paniculata_contig8742.16666.1 vs. uniprot
Match: A0A6H5L244_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L244_9PHAE)

HSP 1 Score: 228 bits (581), Expect = 1.190e-70
Identity = 109/199 (54.77%), Postives = 144/199 (72.36%), Query Frame = 0
Query:    2 QLVRVPKAASTAASMVARALAGCSPPGPCCEWPGDPAGSCPSKGLMCNDKVTGCSGHHMNALTLAMERDPKVFSMSNMRDVKDRIVSAFFYTAPHSPACARRDTVNYKVCFRAMVNSPRYQNVASRMLVGHYAYDGKKKICMTP-----GRG-CVANLRTVIRSACDLNFIALSEAWGTSMLLLFETVPWIAPTEEYMP 194
            QL+RVPKA S+ AS++AR L GC P GPCC +PGDP GSCP +GLMC   VTGC+ H M+  T AM  DP VFSM+N+R V DR+VS FFYT PHSP CA +D V+Y+ CF+ M+ + ++QN+A+RM+ GH AY G  ++CM       G G CV +L +VIR AC+LNF+ + E W +S+LLLFET+PW+ PT ++ P
Sbjct:   59 QLIRVPKAGSSEASVIARRLGGCVPRGPCCRFPGDPPGSCPLEGLMC-PMVTGCTSHRMDPTTTAMLEDPSVFSMANIRGVVDRMVSGFFYTDPHSPPCAWKDDVDYEACFQKMITTRKFQNIAARMVSGHDAYKGGIRLCMDKDQDEGGEGVCVEDLESVIRGACNLNFVTMCETWDSSVLLLFETLPWLGPTADFFP 256          
BLAST of mRNA_H-paniculata_contig8742.16666.1 vs. uniprot
Match: D7FWY0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWY0_ECTSI)

HSP 1 Score: 221 bits (562), Expect = 1.220e-67
Identity = 107/199 (53.77%), Postives = 138/199 (69.35%), Query Frame = 0
Query:    2 QLVRVPKAASTAASMVARALAGCSPPGPCCEWPGDPAGSCPSKGLMCNDKVTGCSGHHMNALTLAMERDPKVFSMSNMRDVKDRIVSAFFYTAPHSPACARRDTVNYKVCFRAMVNSPRYQNVASRMLVGHYAYDGKKKICMTPGR------GCVANLRTVIRSACDLNFIALSEAWGTSMLLLFETVPWIAPTEEYMP 194
            QLVRVPKA S+ AS++AR L GC P GPCC  PG P GSCPS+GLMC   V GC+ H M+     M  DP VFSMSN+RDV DR+VS F YT PHSP C R D V+Y+ CF  M+N+ ++QNVA+RM+ GH AY+G  K+CM   +       C  +L +VI+ AC+LNF+ + EAW +S+LLLFET+ W+ PT ++ P
Sbjct:   78 QLVRVPKAGSSEASVIARRLGGCVPRGPCCMMPGHPPGSCPSEGLMC-PAVLGCTAHMMDPKRNTMLEDPSVFSMSNVRDVVDRMVSGFLYTQPHSPLCTRTDDVDYESCFEEMMNTTKFQNVAARMVSGHDAYEGSVKLCMNKDQDVGGEAACAEDLESVIKGACNLNFVTMCEAWASSVLLLFETLRWLEPTADFFP 275          
BLAST of mRNA_H-paniculata_contig8742.16666.1 vs. uniprot
Match: A0A6H5KAL5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAL5_9PHAE)

HSP 1 Score: 219 bits (558), Expect = 1.060e-66
Identity = 106/198 (53.54%), Postives = 137/198 (69.19%), Query Frame = 0
Query:    3 LVRVPKAASTAASMVARALAGCSPPGPCCEWPGDPAGSCPSKGLMCNDKVTGCSGHHMNALTLAMERDPKVFSMSNMRDVKDRIVSAFFYTAPHSPACARRDTVNYKVCFRAMVNSPRYQNVASRMLVGHYAYDGKKKICMTPGR------GCVANLRTVIRSACDLNFIALSEAWGTSMLLLFETVPWIAPTEEYMP 194
            L+ VPKA S+ AS+VAR L GC P GPCC  PG P GSCPS+GLMC   V GC+ H M+     M  DP VFSMSN+RDV DR+VS F YT PHSP C R D V+Y+ CF  M+N+ ++QNVA+RM+ GH AYD   K+CM   +       C  +L +V++ AC+LNF+ + EAWG+S+LLLFET+PW+ PT ++ P
Sbjct:   53 LMLVPKAGSSEASVVARRLGGCVPRGPCCMMPGHPPGSCPSEGLMC-PAVLGCTAHKMDPKRNTMLEDPSVFSMSNIRDVVDRMVSGFLYTQPHSPLCTRTDDVDYESCFEEMMNTTKFQNVAARMVSGHDAYDSSIKLCMNKDQDVGGEAACAEDLESVMKGACNLNFVTMCEAWGSSVLLLFETLPWLEPTADFFP 249          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8742.16666.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5L244_9PHAE1.190e-7054.77Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7FWY0_ECTSI1.220e-6753.77Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KAL5_9PHAE1.060e-6653.54Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig8742contigH-paniculata_contig8742:363..6187 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig8742.16666.1mRNA_H-paniculata_contig8742.16666.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig8742 363..6187 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig8742.16666.1 ID=prot_H-paniculata_contig8742.16666.1|Name=mRNA_H-paniculata_contig8742.16666.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=194bp
VQLVRVPKAASTAASMVARALAGCSPPGPCCEWPGDPAGSCPSKGLMCND
KVTGCSGHHMNALTLAMERDPKVFSMSNMRDVKDRIVSAFFYTAPHSPAC
ARRDTVNYKVCFRAMVNSPRYQNVASRMLVGHYAYDGKKKICMTPGRGCV
ANLRTVIRSACDLNFIALSEAWGTSMLLLFETVPWIAPTEEYMP
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