prot_H-paniculata_contig8738.16663.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig8738.16663.1
Unique Nameprot_H-paniculata_contig8738.16663.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length68
Homology
BLAST of mRNA_H-paniculata_contig8738.16663.1 vs. uniprot
Match: D7G993_ECTSI (Matrin-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G993_ECTSI)

HSP 1 Score: 137 bits (345), Expect = 2.240e-39
Identity = 65/67 (97.01%), Postives = 65/67 (97.01%), Query Frame = 0
Query:    1 MRCLGIPNTKHFHDITLIQDARDLYAKIKDSLDKEQWNAEDNEEYEDGEGNVLNRRTYEDLARQGLM 67
            MRCLGIPNTKHFHDI LIQDARDLYAKIKDSLDKEQWN EDNEEYEDGEGNVLNRRTYEDLARQGLM
Sbjct:  142 MRCLGIPNTKHFHDIVLIQDARDLYAKIKDSLDKEQWNPEDNEEYEDGEGNVLNRRTYEDLARQGLM 208          
BLAST of mRNA_H-paniculata_contig8738.16663.1 vs. uniprot
Match: D7FUU5_ECTSI (Matrin-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUU5_ECTSI)

HSP 1 Score: 137 bits (345), Expect = 1.210e-36
Identity = 65/67 (97.01%), Postives = 65/67 (97.01%), Query Frame = 0
Query:    1 MRCLGIPNTKHFHDITLIQDARDLYAKIKDSLDKEQWNAEDNEEYEDGEGNVLNRRTYEDLARQGLM 67
            MRCLGIPNTKHFHDI LIQDARDLYAKIKDSLDKEQWN EDNEEYEDGEGNVLNRRTYEDLARQGLM
Sbjct:  474 MRCLGIPNTKHFHDIVLIQDARDLYAKIKDSLDKEQWNPEDNEEYEDGEGNVLNRRTYEDLARQGLM 540          
BLAST of mRNA_H-paniculata_contig8738.16663.1 vs. uniprot
Match: A0A6V1NE02_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NE02_HETAK)

HSP 1 Score: 107 bits (267), Expect = 2.500e-28
Identity = 50/67 (74.63%), Postives = 56/67 (83.58%), Query Frame = 0
Query:    1 MRCLGIPNTKHFHDITLIQDARDLYAKIKDSLDKEQWNAEDNEEYEDGEGNVLNRRTYEDLARQGLM 67
            MRCLGIPNTKHFHDIT I+DA+ LYAK+K  LD + W+    EEYED EGNVLNRRTYEDLARQGL+
Sbjct:   78 MRCLGIPNTKHFHDITTIEDAKALYAKLKAGLDGDAWDGAVEEEYEDSEGNVLNRRTYEDLARQGLL 144          
BLAST of mRNA_H-paniculata_contig8738.16663.1 vs. uniprot
Match: A0A7S2V2Q3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2Q3_9STRA)

HSP 1 Score: 111 bits (277), Expect = 4.110e-28
Identity = 53/67 (79.10%), Postives = 57/67 (85.07%), Query Frame = 0
Query:    1 MRCLGIPNTKHFHDITLIQDARDLYAKIKDSLDKEQWNAEDNEEYEDGEGNVLNRRTYEDLARQGLM 67
            MRCLGIPNTKHFHDITLI+DA  L+ KIKD L  E WNA+  EEYED EGNVLNRRTYEDLARQGL+
Sbjct:  248 MRCLGIPNTKHFHDITLIEDATALFDKIKDQLAGEMWNADMEEEYEDSEGNVLNRRTYEDLARQGLL 314          
BLAST of mRNA_H-paniculata_contig8738.16663.1 vs. uniprot
Match: A0A836CE40_9STRA (Matrin-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CE40_9STRA)

HSP 1 Score: 110 bits (274), Expect = 1.200e-26
Identity = 51/67 (76.12%), Postives = 57/67 (85.07%), Query Frame = 0
Query:    1 MRCLGIPNTKHFHDITLIQDARDLYAKIKDSLDKEQWNAEDNEEYEDGEGNVLNRRTYEDLARQGLM 67
            MRCLGIPNTKHFHDITLIQDA DLYAK+K  L+ E W  +  EE+ED EGNVLN+RTYEDLARQGL+
Sbjct:  476 MRCLGIPNTKHFHDITLIQDAMDLYAKLKGKLEVEAWTPDVGEEFEDSEGNVLNKRTYEDLARQGLL 542          
BLAST of mRNA_H-paniculata_contig8738.16663.1 vs. uniprot
Match: A0A1W0ABW6_9STRA (Splicing factor 3A n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0ABW6_9STRA)

HSP 1 Score: 100 bits (249), Expect = 1.570e-26
Identity = 44/67 (65.67%), Postives = 55/67 (82.09%), Query Frame = 0
Query:    1 MRCLGIPNTKHFHDITLIQDARDLYAKIKDSLDKEQWNAEDNEEYEDGEGNVLNRRTYEDLARQGLM 67
            MRCLGIPNTKHFHDIT + DA  LY K+K+ L++E WN  + EE+ED EGNVLN++TY+DL RQGL+
Sbjct:    1 MRCLGIPNTKHFHDITSMSDALALYEKLKEQLERETWNKANEEEFEDSEGNVLNKKTYQDLERQGLL 67          
BLAST of mRNA_H-paniculata_contig8738.16663.1 vs. uniprot
Match: A0A812TNG2_SYMMI (SF3A3 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812TNG2_SYMMI)

HSP 1 Score: 107 bits (268), Expect = 2.890e-26
Identity = 51/67 (76.12%), Postives = 59/67 (88.06%), Query Frame = 0
Query:    1 MRCLGIPNTKHFHDITLIQDARDLYAKIKDSLDKEQWNAEDNEEYEDGEGNVLNRRTYEDLARQGLM 67
            MRCLG+PNTKHFHDITLI+DA  LY+KI+DSL KEQ+  +  EE+ED EGNVLNRRTYEDLARQGL+
Sbjct:  332 MRCLGVPNTKHFHDITLIEDALALYSKIRDSLKKEQFVEDVEEEFEDSEGNVLNRRTYEDLARQGLL 398          
BLAST of mRNA_H-paniculata_contig8738.16663.1 vs. uniprot
Match: A0A2D4BU83_PYTIN (C2H2-type domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BU83_PYTIN)

HSP 1 Score: 109 bits (272), Expect = 3.050e-26
Identity = 50/67 (74.63%), Postives = 58/67 (86.57%), Query Frame = 0
Query:    1 MRCLGIPNTKHFHDITLIQDARDLYAKIKDSLDKEQWNAEDNEEYEDGEGNVLNRRTYEDLARQGLM 67
            MRCLGIPNTKHFHDIT +QDA  LY K+KD +D+E WNAE  EE+ED EGNVL+R+TYEDLARQGL+
Sbjct: 2171 MRCLGIPNTKHFHDITGMQDAIALYEKLKDQIDQENWNAEKEEEFEDSEGNVLSRKTYEDLARQGLL 2237          
BLAST of mRNA_H-paniculata_contig8738.16663.1 vs. uniprot
Match: A0A329SA63_9STRA (C2H2-type domain-containing protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A329SA63_9STRA)

HSP 1 Score: 108 bits (270), Expect = 3.860e-26
Identity = 49/67 (73.13%), Postives = 57/67 (85.07%), Query Frame = 0
Query:    1 MRCLGIPNTKHFHDITLIQDARDLYAKIKDSLDKEQWNAEDNEEYEDGEGNVLNRRTYEDLARQGLM 67
            MRCL IPNTKHFHDITL++DA  LY K+KD +D E WNA + EE+ED EGNVLNR+TYEDLARQGL+
Sbjct:  450 MRCLKIPNTKHFHDITLMRDAIQLYEKLKDQIDAESWNASNEEEFEDSEGNVLNRKTYEDLARQGLL 516          
BLAST of mRNA_H-paniculata_contig8738.16663.1 vs. uniprot
Match: A0A2P4X7F8_9STRA (Splicing factor 3A n=2 Tax=Phytophthora TaxID=4783 RepID=A0A2P4X7F8_9STRA)

HSP 1 Score: 108 bits (270), Expect = 3.880e-26
Identity = 49/67 (73.13%), Postives = 57/67 (85.07%), Query Frame = 0
Query:    1 MRCLGIPNTKHFHDITLIQDARDLYAKIKDSLDKEQWNAEDNEEYEDGEGNVLNRRTYEDLARQGLM 67
            MRCL IPNTKHFHDITL++DA  LY K+KD +D E WNA + EE+ED EGNVLNR+TYEDLARQGL+
Sbjct:  451 MRCLKIPNTKHFHDITLMRDAIQLYEKLKDQIDAESWNASNEEEFEDSEGNVLNRKTYEDLARQGLL 517          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8738.16663.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G993_ECTSI2.240e-3997.01Matrin-type domain-containing protein n=1 Tax=Ecto... [more]
D7FUU5_ECTSI1.210e-3697.01Matrin-type domain-containing protein n=2 Tax=Ecto... [more]
A0A6V1NE02_HETAK2.500e-2874.63Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2V2Q3_9STRA4.110e-2879.10Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A836CE40_9STRA1.200e-2676.12Matrin-type domain-containing protein n=1 Tax=Trib... [more]
A0A1W0ABW6_9STRA1.570e-2665.67Splicing factor 3A n=1 Tax=Thraustotheca clavata T... [more]
A0A812TNG2_SYMMI2.890e-2676.12SF3A3 protein n=1 Tax=Symbiodinium microadriaticum... [more]
A0A2D4BU83_PYTIN3.050e-2674.63C2H2-type domain-containing protein n=1 Tax=Pythiu... [more]
A0A329SA63_9STRA3.860e-2673.13C2H2-type domain-containing protein n=3 Tax=Phytop... [more]
A0A2P4X7F8_9STRA3.880e-2673.13Splicing factor 3A n=2 Tax=Phytophthora TaxID=4783... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR024598Domain of unknown function DUF3449PFAMPF11931DUF3449coord: 1..66
e-value: 2.2E-22
score: 79.7
IPR031776Splicing factor 3A subunit 3PANTHERPTHR12786:SF2SPLICING FACTOR 3A SUBUNIT 3coord: 1..67
NoneNo IPR availablePANTHERPTHR12786SPLICING FACTOR SF3A-RELATEDcoord: 1..67

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig8738contigH-paniculata_contig8738:2946..3149 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig8738.16663.1mRNA_H-paniculata_contig8738.16663.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig8738 697..7817 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig8738.16663.1 ID=prot_H-paniculata_contig8738.16663.1|Name=mRNA_H-paniculata_contig8738.16663.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=68bp
MRCLGIPNTKHFHDITLIQDARDLYAKIKDSLDKEQWNAEDNEEYEDGEG
NVLNRRTYEDLARQGLM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR024598DUF3449
IPR031776SF3A3