prot_H-paniculata_contig8646.16604.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig8646.16604.1
Unique Nameprot_H-paniculata_contig8646.16604.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length83
Homology
[Close]
BLAST of mRNA_H-paniculata_contig8646.16604.1 vs. uniprot
Match: D7FHV7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHV7_ECTSI)

HSP 1 Score: 102 bits (253), Expect = 2.180e-26
Identity = 51/78 (65.38%), Postives = 58/78 (74.36%), Query Frame = 0 
Query:    1 MRQLKNAGSIDGVTFQDQVARLLLCSLEVFHRRRTESGDADGTSPPSDLASVVLGSDLPAVFPEARVKRLCAGRVLPS 78
            +R+L+ AG ID V F DQV RL LC+LE+F RRRT SGDA  T  P DL SVVLG DL   FPEARVKR+CAG V+PS
Sbjct:   20 LRKLQGAGDIDCVIFIDQVTRLALCALEIFLRRRTSSGDAAKTPAPGDLGSVVLGEDLAVAFPEARVKRVCAGGVMPS 97
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8646.16604.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FHV7_ECTSI2.180e-2665.38Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig8646contigH-paniculata_contig8646:1460..2199 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig8646.16604.1mRNA_H-paniculata_contig8646.16604.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig8646 2..3088 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig8646.16604.1 ID=prot_H-paniculata_contig8646.16604.1|Name=mRNA_H-paniculata_contig8646.16604.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=83bp
MRQLKNAGSIDGVTFQDQVARLLLCSLEVFHRRRTESGDADGTSPPSDLA
SVVLGSDLPAVFPEARVKRLCAGRVLPSRDYS*
back to top