prot_H-paniculata_contig8638.16596.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig8638.16596.1
Unique Nameprot_H-paniculata_contig8638.16596.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length63
Homology
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BLAST of mRNA_H-paniculata_contig8638.16596.1 vs. uniprot
Match: A0A6H5K7D3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7D3_9PHAE)

HSP 1 Score: 104 bits (259), Expect = 7.610e-28
Identity = 45/61 (73.77%), Postives = 48/61 (78.69%), Query Frame = 0 
Query:    1 MVCRVAPPAIDFRGRLSRRHEALESWSLTRTVTCLHRRGMSWTAVYWFLWGLTQSLACQEC 61
            M CR APP + FRG+L RRHE L  WSLTRTVT LHR+GMSWTAVYWFLWGLTQ L C  C
Sbjct:   31 MSCRAAPPTVSFRGQLLRRHEPLSPWSLTRTVTSLHRKGMSWTAVYWFLWGLTQPLYCVRC 91
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BLAST of mRNA_H-paniculata_contig8638.16596.1 vs. uniprot
Match: D8LHL4_ECTSI (DUF3342 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHL4_ECTSI)

HSP 1 Score: 104 bits (259), Expect = 1.390e-24
Identity = 45/61 (73.77%), Postives = 48/61 (78.69%), Query Frame = 0 
Query:    1 MVCRVAPPAIDFRGRLSRRHEALESWSLTRTVTCLHRRGMSWTAVYWFLWGLTQSLACQEC 61
            M CR APP + FRG+L RRHE L  WSLTRTVT LHR+GMSWTAVYWFLWGLTQ L C  C
Sbjct:  516 MSCRAAPPTVSFRGQLLRRHEPLSPWSLTRTVTSLHRKGMSWTAVYWFLWGLTQPLYCVRC 576
[Close]
BLAST of mRNA_H-paniculata_contig8638.16596.1 vs. uniprot
Match: A0A835YQX4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQX4_9STRA)

HSP 1 Score: 85.1 bits (209), Expect = 8.070e-18
Identity = 35/62 (56.45%), Postives = 41/62 (66.13%), Query Frame = 0 
Query:    1 MVCRVAPPAIDFRGRLSRRHEALESWSLTRTVTCLHRRGMSWTAVYWFLWGLTQSLACQECG 62
            + C  APP +D RGRL RRH     WSLT  V  LH RGM+WT VYW LWG T++L C+ CG
Sbjct:  369 LTCARAPPLVDARGRLVRRHAPARPWSLTALVAALHARGMTWTEVYWLLWGATRTLRCRRCG 430
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8638.16596.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5K7D3_9PHAE7.610e-2873.77Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LHL4_ECTSI1.390e-2473.77DUF3342 domain-containing protein n=1 Tax=Ectocarp... [more]
A0A835YQX4_9STRA8.070e-1856.45Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig8638contigH-paniculata_contig8638:9810..9998 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig8638.16596.1mRNA_H-paniculata_contig8638.16596.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig8638 9810..10004 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig8638.16596.1 ID=prot_H-paniculata_contig8638.16596.1|Name=mRNA_H-paniculata_contig8638.16596.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=63bp
MVCRVAPPAIDFRGRLSRRHEALESWSLTRTVTCLHRRGMSWTAVYWFLW
GLTQSLACQECG*
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